├── .Rbuildignore ├── .travis.yml ├── DESCRIPTION ├── NAMESPACE ├── R ├── I_adTest.R ├── I_allVars1.R ├── I_biasedCov.R ├── I_brent.R ├── I_checkLoss.R ├── I_cleanData.R ├── I_clusterExport.R ├── I_clusterSetUp.R ├── I_colVars.R ├── I_ctrlSetup.R ├── I_egamFit.R ├── I_fitShash.R ├── I_getErrParam.R ├── I_getPenMatrix.R ├── I_init_gauss_fit.R ├── I_invert_psdef_matrix.R ├── I_kcheck.R ├── I_llkGrads.R ├── I_llkShash.R ├── I_objFunLearnFast.R ├── I_prepBootObj.R ├── I_qqVett.R ├── I_sandwichLoss.R ├── I_shashCDF.R ├── I_shashMode.R ├── I_shashQf.R ├── I_should_we_use_discrete.R ├── I_tuneLearnBootstrapping.R ├── I_tuneLearnFullFits.R ├── check_learn.R ├── check_learnFast.R ├── check_qgam.R ├── cqcheck.R ├── cqcheckI.R ├── elf.R ├── elflss.R ├── generic_functions.R ├── log1pexp.R ├── mqgam.R ├── pinLoss.R ├── qdo.R ├── qgam.R ├── sigmoid.R ├── tuneLearn.R └── tuneLearnFast.R ├── README.md ├── appveyor.yml ├── data ├── AUDem.RData └── UKload.RData ├── docs ├── articles │ ├── index.html │ ├── qgam.html │ └── qgam_files │ │ └── figure-html │ │ ├── 1-1.png │ │ ├── 2-1.png │ │ ├── 3-1.png │ │ ├── 3-2.png │ │ ├── 5-1.png │ │ ├── c10-1.png │ │ ├── c11-1.png │ │ ├── c11-2.png │ │ ├── c2-1.png │ │ ├── c3-1.png │ │ ├── c4-1.png │ │ ├── c5-1.png │ │ ├── c6-1.png │ │ ├── c7-1.png │ │ ├── c8-1.png │ │ ├── check2-1.png │ │ ├── check2b-1.png │ │ ├── check4-1.png │ │ ├── check4-2.png │ │ ├── check5-1.png │ │ ├── check5-2.png │ │ ├── edf1-1.png │ │ ├── edf3-1.png │ │ ├── edf3-2.png │ │ ├── edf4-1.png │ │ ├── edf5-1.png │ │ ├── edf6-1.png │ │ ├── h1-1.png │ │ ├── h2-1.png │ │ ├── h3-1.png │ │ ├── h4-1.png │ │ ├── mcy2rnd-1.png │ │ └── mcy2rnd2-1.png ├── authors.html ├── docsearch.css ├── docsearch.js ├── index.html ├── link.svg ├── pkgdown.css ├── pkgdown.js ├── pkgdown.yml └── reference │ ├── UKload-1.png │ ├── UKload.html │ ├── check-1.png │ ├── check-2.png │ ├── check-3.png │ ├── check.html │ ├── check.learn-1.png │ ├── check.learn-2.png │ ├── check.learn.html │ ├── check.learnFast-1.png │ ├── check.learnFast-2.png │ ├── check.learnFast-3.png │ ├── check.learnFast.html │ ├── check.qgam-1.png │ ├── check.qgam-2.png │ ├── check.qgam-3.png │ ├── check.qgam.html │ ├── cqcheck.html │ ├── cqcheckI.html │ ├── elf-1.png │ ├── elf-2.png │ ├── elf.html │ ├── elflss.html │ ├── index.html │ ├── log1pexp.html │ ├── mqgam-1.png │ ├── mqgam-2.png │ ├── mqgam.html │ ├── pinLoss-1.png │ ├── pinLoss.html │ ├── qdo-1.png │ ├── qdo-2.png │ ├── qdo.html │ ├── qgam-1.png │ ├── qgam-2.png │ ├── qgam.html │ ├── sigmoid.html │ ├── tuneLearn-1.png │ ├── tuneLearn-2.png │ ├── tuneLearn.html │ ├── tuneLearnFast-1.png │ ├── tuneLearnFast-2.png │ └── tuneLearnFast.html ├── inst └── CITATION ├── man ├── AUDem.Rd ├── UKload.Rd ├── check.Rd ├── check.learn.Rd ├── check.learnFast.Rd ├── check.qgam.Rd ├── cqcheck.Rd ├── cqcheckI.Rd ├── elf.Rd ├── elflss.Rd ├── log1pexp.Rd ├── mqgam.Rd ├── pinLoss.Rd ├── qdo.Rd ├── qgam.Rd ├── sigmoid.Rd ├── tuneLearn.Rd └── tuneLearnFast.Rd ├── src 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