├── MinPath.py ├── README.md ├── data ├── .MetaCyc-mapping.txt.swp ├── KEGG-family.txt ├── KEGG-mapping.txt ├── KEGG-pathway.txt ├── MetaCyc-family.txt ├── MetaCyc-mapping.txt ├── MetaCyc-pathway.txt ├── ec2path └── figfam_subsystem.dat ├── examples ├── demo.any ├── demo.any.minpath ├── demo.any.minpath.details ├── demo.ec ├── demo.ec.minpath ├── demo.ec.minpath.details ├── demo.fig ├── demo.fig.minpath ├── demo.fig.minpath.details ├── demo.ko ├── demo.ko.minpath └── demo.ko.minpath.details ├── glpk-4.6 ├── AUTHORS ├── COPYING ├── ChangeLog ├── INSTALL ├── Makefile ├── Makefile.am ├── Makefile.in ├── NEWS ├── README ├── aclocal.m4 ├── config.cache ├── config.log ├── config.status ├── configure ├── configure.in ├── contrib │ ├── deli │ │ ├── GLPK DELI User Guide.txt │ │ ├── Glpk4.PAS │ │ ├── MainForm.dfm │ │ ├── MainForm.pas │ │ ├── Sample.pas │ │ └── TestGLPK.dpr │ ├── glpkmex │ │ ├── CVS │ │ │ ├── Entries │ │ │ ├── Repository │ │ │ └── Root │ │ ├── ChangeLog │ │ ├── INSTALL │ │ ├── doc │ │ │ ├── CVS │ │ │ │ ├── Entries │ │ │ │ ├── Repository │ │ │ │ └── Root │ │ │ ├── glpkmex.m │ │ │ └── glpkparams.m │ │ ├── examples │ │ │ ├── CVS │ │ │ │ ├── Entries │ │ │ │ ├── Repository │ │ │ │ └── Root │ │ │ ├── glpksparse.m │ │ │ ├── glpktest1.m │ │ │ └── glpktest2.m │ │ └── src │ │ │ ├── CVS │ │ │ ├── Entries │ │ │ ├── Repository │ │ │ └── Root │ │ │ ├── glpkfun.h │ │ │ ├── glpkmex.c │ │ │ ├── glpksets.h │ │ │ └── makeglpk.m │ └── jni │ │ ├── Makefile │ │ ├── README │ │ ├── c │ │ ├── Makefile │ │ └── glpk.c │ │ ├── java │ │ ├── GlpkHookIFC.java │ │ ├── GlpkSolver.java │ │ ├── GlpkSolverBnds.java │ │ ├── GlpkSolverInfo.java │ │ ├── GlpkSolverKktConditions.java │ │ ├── GlpkSolverLoader.java │ │ ├── GlpkSolverMatElement.java │ │ ├── GlpkSolverObjChg.java │ │ ├── GlpkSolverPoint.java │ │ ├── Makefile │ │ └── build.xml │ │ └── sample │ │ ├── GlpkMagicSquare.java │ │ ├── Makefile │ │ └── README ├── d32dmc.mak ├── doc │ ├── GLPK_FAQ.txt │ ├── bench.txt │ ├── lang.dvi │ ├── lang.latex │ ├── lang.ps │ ├── refman.dvi │ ├── refman.latex │ └── refman.ps ├── examples │ ├── .deps │ │ ├── glpsol.P │ │ └── tspsol.P │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── bpp.mod │ ├── dantzig.tsp │ ├── diet.mod │ ├── dist.mod │ ├── egypt.mod │ ├── fctp.mod │ ├── gap.mod │ ├── glpsol │ ├── glpsol.c │ ├── glpsol.o │ ├── jssp.mod │ ├── lpglpk40.c │ ├── misp.mod │ ├── moscow.tsp │ ├── mtsamp.c │ ├── plan.lpt │ ├── plan.mod │ ├── plan.mps │ ├── prod.mod │ ├── queens.mod │ ├── samp1.mps │ ├── samp2.mps │ ├── sample.c │ ├── sample.tsp │ ├── sat.mod │ ├── spp.mod │ ├── todd.mod │ ├── train.mod │ ├── transp.mod │ ├── tspsol │ ├── tspsol.c │ └── tspsol.o ├── include │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── glpavl.h │ ├── glpchol.h │ ├── glpdmp.h │ ├── glpiet.h │ ├── glpinv.h │ ├── glpios.h │ ├── glpipm.h │ ├── glpk.h │ ├── glplib.h │ ├── glplpp.h │ ├── glplpt.h │ ├── glplpx.h │ ├── glpluf.h │ ├── glpmat.h │ ├── glpmip.h │ ├── glpmpl.h │ ├── glpmps.h │ ├── glpqmd.h │ ├── glprng.h │ ├── glpspx.h │ ├── glpstr.h │ └── glptsp.h ├── install-sh ├── missing ├── mkinstalldirs ├── src │ ├── .deps │ │ ├── glpavl.P │ │ ├── glpchol.P │ │ ├── glpdmp.P │ │ ├── glpiet.P │ │ ├── glpinv.P │ │ ├── glpios1.P │ │ ├── glpios2.P │ │ ├── glpios3.P │ │ ├── glpipm.P │ │ ├── glplib1a.P │ │ ├── glplib1b.P │ │ ├── glplib2.P │ │ ├── glplib3.P │ │ ├── glplpp1.P │ │ ├── glplpp2.P │ │ ├── glplpt.P │ │ ├── glplpx1.P │ │ ├── glplpx2.P │ │ ├── glplpx3.P │ │ ├── glplpx4.P │ │ ├── glplpx5.P │ │ ├── glplpx6a.P │ │ ├── glplpx6b.P │ │ ├── glplpx6c.P │ │ ├── glplpx6d.P │ │ ├── glplpx7.P │ │ ├── glplpx8a.P │ │ ├── glplpx8b.P │ │ ├── glplpx8c.P │ │ ├── glplpx8d.P │ │ ├── glplpx8e.P │ │ ├── glpluf.P │ │ ├── glpmat.P │ │ ├── glpmip1.P │ │ ├── glpmip2.P │ │ ├── glpmpl1.P │ │ ├── glpmpl2.P │ │ ├── glpmpl3.P │ │ ├── glpmpl4.P │ │ ├── glpmps.P │ │ ├── glpqmd.P │ │ ├── glprng.P │ │ ├── glpspx1.P │ │ ├── glpspx2.P │ │ ├── glpstr.P │ │ └── glptsp.P │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── glpavl.c │ ├── glpavl.o │ ├── glpchol.c │ ├── glpchol.o │ ├── glpdmp.c │ ├── glpdmp.o │ ├── glpiet.c │ ├── glpiet.o │ ├── glpinv.c │ ├── glpinv.o │ ├── glpios1.c │ ├── glpios1.o │ ├── glpios2.c │ ├── glpios2.o │ ├── glpios3.c │ ├── glpios3.o │ ├── glpipm.c │ ├── glpipm.o │ ├── glplib1a.c │ ├── glplib1a.o │ ├── glplib1b.c │ ├── glplib1b.o │ ├── glplib2.c │ ├── glplib2.o │ ├── glplib3.c │ ├── glplib3.o │ ├── glplpp1.c │ ├── glplpp1.o │ ├── glplpp2.c │ ├── glplpp2.o │ ├── glplpt.c │ ├── glplpt.o │ ├── glplpx1.c │ ├── glplpx1.o │ ├── glplpx2.c │ ├── glplpx2.o │ ├── glplpx3.c │ ├── glplpx3.o │ ├── glplpx4.c │ ├── glplpx4.o │ ├── glplpx5.c │ ├── glplpx5.o │ ├── glplpx6a.c │ ├── glplpx6a.o │ ├── glplpx6b.c │ ├── glplpx6b.o │ ├── glplpx6c.c │ ├── glplpx6c.o │ ├── glplpx6d.c │ ├── glplpx6d.o │ ├── glplpx7.c │ ├── glplpx7.o │ ├── glplpx8a.c │ ├── glplpx8a.o │ ├── glplpx8b.c │ ├── glplpx8b.o │ ├── glplpx8c.c │ ├── glplpx8c.o │ ├── glplpx8d.c │ ├── glplpx8d.o │ ├── glplpx8e.c │ 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