├── .coveragerc ├── .gitattributes ├── .github └── workflows │ └── tests.yml ├── .gitignore ├── LICENSE ├── README.md ├── _static ├── fmriprep.jpg ├── graph1.jpg ├── graph2.jpg ├── multiverse1.jpg ├── multiverse2.jpg ├── multiverse3.jpg ├── multiverse4.jpg ├── multiverse5.jpg ├── single_file.jpg ├── sliding_window.jpg ├── sliding_window2.jpg ├── sliding_window3.jpg ├── start.jpg ├── state1.jpg └── state2.jpg ├── docs ├── Makefile ├── make.bat └── source │ ├── README.rst │ ├── _static │ ├── content.png │ └── logo.svg │ ├── conf.py │ ├── index.rst │ ├── links.rst │ └── sections │ ├── _static │ ├── api.rst │ ├── contribute.rst │ ├── installation.rst │ ├── modules │ ├── cifti.rst │ ├── connectivity.rst │ ├── graph.rst │ ├── multiverse.rst │ └── utils.rst │ ├── notebooks │ ├── tutorials.rst │ └── usage.rst ├── pyproject.toml ├── readthedocs.yaml ├── src └── comet │ ├── __init__.py │ ├── bids.py │ ├── cifti.py │ ├── connectivity.py │ ├── data │ ├── atlas │ │ ├── Q1-Q6_RelatedValidation210.CorticalAreas_dil_Final_Final_Areas_Group_Colors_with_Atlas_ROIs2.32k_fs_LR.dlabel.nii │ │ └── fs_LR_32k_medial_mask.mat │ ├── hurricane.tsv │ ├── img │ │ ├── content.drawio │ │ ├── content.png │ │ ├── doi.svg │ │ ├── gui.png │ │ ├── logo.png │ │ ├── logo.svg │ │ └── pypi.svg │ ├── simulation.mat │ ├── tests │ │ ├── connectivity.mat │ │ └── graph.mat │ └── time_series.txt │ ├── graph.py │ ├── gui.py │ ├── multiverse.py │ └── utils.py ├── tests ├── MATLAB │ ├── README.md │ ├── combine.py │ ├── create_dcc.m │ ├── create_ets.m │ ├── create_fls.m │ ├── create_leida.m │ └── time_series.txt ├── test_connectivity.py ├── test_graph.py └── test_utils.py └── tutorials ├── example_dfc_cont.ipynb ├── example_dfc_prep1.ipynb ├── example_dfc_prep2.ipynb ├── example_dfc_prep3.ipynb ├── example_dfc_state1.ipynb ├── example_dfc_state2.ipynb ├── example_dfc_state3.ipynb ├── example_graph.ipynb ├── example_graph_benchmark.ipynb ├── example_gui.ipynb ├── example_mv_abide.ipynb ├── example_mv_basics.ipynb ├── example_mv_eeg_sim.ipynb ├── example_mv_fmri_sim.ipynb ├── example_mv_hurricane.ipynb ├── example_mv_load.ipynb ├── example_mv_recipes.ipynb └── example_mv_structure.ipynb /.coveragerc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mibur1/comet/HEAD/.coveragerc -------------------------------------------------------------------------------- /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mibur1/comet/HEAD/.gitattributes -------------------------------------------------------------------------------- /.github/workflows/tests.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mibur1/comet/HEAD/.github/workflows/tests.yml -------------------------------------------------------------------------------- /.gitignore: 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