├── LICENSE ├── README.md ├── SweetTalk_main.ipynb ├── datasets ├── combined_database_long.csv ├── glyco_targets_species_seq.csv ├── immunogenic_glycans_clean.csv └── sugar_scrape_unicarb_clean_long.csv └── models ├── SweetTalk_immunoClassifier_large.pt ├── SweetTalk_large2.pt ├── SweetTalk_large_char.pt └── SweetTalk_linkageClassifier_large.pt /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/README.md -------------------------------------------------------------------------------- /SweetTalk_main.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/SweetTalk_main.ipynb -------------------------------------------------------------------------------- /datasets/combined_database_long.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/datasets/combined_database_long.csv -------------------------------------------------------------------------------- /datasets/glyco_targets_species_seq.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/datasets/glyco_targets_species_seq.csv -------------------------------------------------------------------------------- /datasets/immunogenic_glycans_clean.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/datasets/immunogenic_glycans_clean.csv -------------------------------------------------------------------------------- /datasets/sugar_scrape_unicarb_clean_long.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/datasets/sugar_scrape_unicarb_clean_long.csv -------------------------------------------------------------------------------- /models/SweetTalk_immunoClassifier_large.pt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/models/SweetTalk_immunoClassifier_large.pt -------------------------------------------------------------------------------- /models/SweetTalk_large2.pt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/models/SweetTalk_large2.pt -------------------------------------------------------------------------------- /models/SweetTalk_large_char.pt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/models/SweetTalk_large_char.pt -------------------------------------------------------------------------------- /models/SweetTalk_linkageClassifier_large.pt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/midas-wyss/sweettalk/HEAD/models/SweetTalk_linkageClassifier_large.pt --------------------------------------------------------------------------------