├── .Rbuildignore ├── .gitignore ├── .travis.yml ├── DESCRIPTION ├── LICENSE ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── SAVER-package.R ├── calc_estimate.R ├── calc_loglik.R ├── calc_maxcor.R ├── calc_posterior.R ├── combine_saver.R ├── cor_adjust.R ├── data.R ├── expr_predict.R ├── get_mu.R ├── optimize_variance.R ├── sample_saver.R ├── saver.R ├── saver_fit.R └── utils.R ├── README.md ├── cran-comments.md ├── data ├── linnarsson.rda └── linnarsson_saver.rda ├── docs ├── articles │ ├── index.html │ └── saver-tutorial.html ├── authors.html ├── docsearch.css ├── docsearch.js ├── index.html ├── link.svg ├── news │ └── index.html ├── pkgdown.css ├── pkgdown.js ├── pkgdown.yml └── reference │ ├── SAVER-package.html │ ├── calc.maxcor.html │ ├── calc.post.html │ ├── calc_estimate.html │ ├── calc_loglik.html │ ├── combine.saver.html │ ├── cor_adjust.html │ ├── expr.predict.html │ ├── get.mu.html │ ├── index.html │ ├── linnarsson.html │ ├── linnarsson_saver.html │ ├── optimize_variance.html │ ├── sample.saver.html │ ├── saver.html │ └── saver_fit.html ├── inst └── CITATION ├── man ├── SAVER-package.Rd ├── calc.maxcor.Rd ├── calc.post.Rd ├── calc_estimate.Rd ├── calc_loglik.Rd ├── combine.saver.Rd ├── cor_adjust.Rd ├── expr.predict.Rd ├── get.mu.Rd ├── linnarsson.Rd ├── linnarsson_saver.Rd ├── optimize_variance.Rd ├── sample.saver.Rd ├── saver.Rd └── saver_fit.Rd └── vignettes └── saver-tutorial.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mohuangx/SAVER/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/mohuangx/SAVER/HEAD/.gitignore -------------------------------------------------------------------------------- /.travis.yml: 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