├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── R-CMD-check.yaml │ ├── pkgdown.yaml │ └── test-coverage.yaml ├── .gitignore ├── .hooks └── description ├── .pre-commit-config.yaml ├── DESCRIPTION ├── NAMESPACE ├── R ├── RcppExports.R ├── edges.R ├── plot-fns.R ├── scl-full.R ├── scl-redcap.R ├── spatialcluster-package.R ├── statistics.R ├── tree.R ├── utils.R └── zzz.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── codemeta.json ├── makefile ├── man ├── figures │ ├── README-cautionary-1.png │ └── README-full-single-1.png ├── plot.scl.Rd ├── plot_merges.Rd ├── scl_full.Rd ├── scl_recluster.Rd ├── scl_redcap.Rd └── spatialcluster.Rd ├── src ├── RcppExports.cpp ├── alk.cpp ├── alk.h ├── bst.h ├── clk.cpp ├── clk.h ├── common.h ├── cuttree.cpp ├── cuttree.h ├── full-init.cpp ├── full-init.h ├── full-merge.cpp ├── full-merge.h ├── mst.cpp ├── mst.h ├── slk.cpp ├── slk.h ├── spatialcluster_init.c ├── utils.cpp └── utils.h ├── tests ├── testthat.R └── testthat │ ├── 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