├── .gitignore ├── .landscape.yml ├── .travis.yml ├── LICENSE ├── README.md ├── basesetup.py ├── devtools ├── README.md ├── conda-recipe │ ├── bld.bat │ ├── build.sh │ └── meta.yaml ├── flake8-hook ├── pre-commit ├── remove-trailing-whitepace-hook ├── setup-git-hooks.sh ├── travis-ci │ ├── build_docs.sh │ ├── install_miniconda.sh │ ├── set_doc_version.py │ └── update_versions_json.py └── verify-future-imports-hook ├── docs ├── .gitignore ├── Makefile ├── _static │ ├── mdentropy.png │ └── mdentropy.svg ├── api.rst ├── bibparse.py ├── changelog.rst ├── conf.py ├── contributing.rst ├── examples │ ├── index.rst │ └── mutual-information.rst ├── index.rst ├── installation.rst ├── publications.bib ├── publications_templ.rst ├── requirements.txt └── sphinxext │ ├── embed.tpl │ └── notebook_sphinxext.py ├── examples ├── .gitignore └── mutual-information.ipynb ├── mdentropy ├── .gitignore ├── __init__.py ├── cli │ ├── __init__.py │ ├── dmutinf.py │ ├── dtent.py │ └── main.py ├── core │ ├── __init__.py │ ├── binning.py │ ├── entropy.py │ └── information.py ├── metrics │ ├── __init__.py │ ├── base.py │ ├── mutinf.py │ └── tent.py ├── tests │ ├── __init__.py │ ├── test_cli.py │ ├── test_cmutinf.py │ ├── test_entropy.py │ └── test_mutinf.py └── utils.py ├── paper ├── compile_paper.sh ├── paper.bib ├── paper.md ├── paper.pdf └── paper.template ├── requirements.txt └── setup.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/msmbuilder/mdentropy/HEAD/.gitignore -------------------------------------------------------------------------------- /.landscape.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/msmbuilder/mdentropy/HEAD/.landscape.yml -------------------------------------------------------------------------------- /.travis.yml: -------------------------------------------------------------------------------- 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