├── BrainGNN ├── BrainGNN_data.py ├── BrainGNN_encoder.py ├── Finetune_BrainGNN.py ├── Pretrain_BrainGNN.py ├── Pretrained_BrainGNN_009.pth.tar ├── Pretrained_BrainGNN_019.pth.tar ├── Pretrained_BrainGNN_029.pth.tar ├── Pretrained_BrainGNN_039.pth.tar ├── Pretrained_BrainGNN_049.pth.tar ├── README ├── __pycache__ │ └── BrainGNN_encoder.cpython-39.pyc └── imports │ ├── __pycache__ │ ├── gdc.cpython-39.pyc │ └── read_abide_stats_parall.cpython-39.pyc │ ├── gdc.py │ └── read_abide_stats_parall.py ├── BrainNetCNN ├── BrainNetCNN_encoder.py ├── Finetune_BrainNetCNN.py ├── Pretrain_BrainNetCNN.py ├── Pretrained_BrainNetCNN_009.pth.tar ├── Pretrained_BrainNetCNN_019.pth.tar ├── Pretrained_BrainNetCNN_029.pth.tar ├── Pretrained_BrainNetCNN_039.pth.tar ├── README └── __pycache__ │ └── BrainNetCNN_encoder.cpython-39.pyc ├── Demo_Data ├── README ├── data │ ├── demo_data_site_1.npy │ ├── demo_data_site_2.npy │ └── demo_data_site_3.npy └── label │ ├── demo_lab_site_1.npy │ ├── demo_lab_site_2.npy │ └── demo_lab_site_3.npy ├── FedAvg ├── README ├── dataset.py ├── fedavg.py ├── model.py ├── options.py └── weight_avg.py ├── FedProx ├── README ├── dataset.py ├── fedprox.py ├── model.py ├── options.py └── weight_avg.py ├── GAT ├── Finetune_GAT.py ├── GAT_encoder.py ├── Pretrain_GAT.py ├── Pretrained_GAT_009.pth.tar ├── Pretrained_GAT_019.pth.tar ├── Pretrained_GAT_029.pth.tar ├── Pretrained_GAT_039.pth.tar ├── README └── __pycache__ │ └── GAT_encoder.cpython-39.pyc ├── GCN ├── Finetune_GCN.py ├── GCN_encoder.py ├── Pretrain_GCN.py ├── Pretrained_GCN_009.pth.tar ├── Pretrained_GCN_019.pth.tar ├── Pretrained_GCN_029.pth.tar ├── Pretrained_GCN_039.pth.tar ├── README └── __pycache__ │ └── GCN_encoder.cpython-39.pyc ├── GIN ├── Finetune_GIN.py ├── GIN_encoder.py ├── Pretrain_GIN.py ├── Pretrained_GIN_009.pth.tar ├── Pretrained_GIN_019.pth.tar ├── Pretrained_GIN_029.pth.tar ├── Pretrained_GIN_039.pth.tar ├── Pretrained_GIN_049.pth.tar ├── README └── __pycache__ │ └── GIN_encoder.cpython-39.pyc ├── GraphSAGE ├── BasicModel.py ├── Finetune_GraphSAGE.py ├── GraphSAGE_encoder.py ├── Pretrain_GraphSAGE.py ├── Pretrained_GraphSAGE_009.pth.tar ├── Pretrained_GraphSAGE_019.pth.tar ├── Pretrained_GraphSAGE_029.pth.tar ├── Pretrained_GraphSAGE_039.pth.tar ├── README └── __pycache__ │ ├── BasicModel.cpython-39.pyc │ └── GraphSAGE_encoder.cpython-39.pyc ├── HGCN ├── HGCN_encoder.py ├── Pretrain_HGCN.py ├── Pretrained_HGCN_009.pth.tar ├── Pretrained_HGCN_019.pth.tar ├── Pretrained_HGCN_029.pth.tar ├── Pretrained_HGCN_039.pth.tar └── ReadMe ├── HKGAT ├── Finetune_HKGAT.py ├── HKGAT_encoder.py ├── Pretrained_HKGAT_009.pth.tar ├── Pretrained_HKGAT_019.pth.tar ├── Pretrained_HKGAT_029.pth.tar ├── Pretrained_HKGAT_039.pth.tar ├── README ├── ReadMe └── pmath.py ├── HKGCN ├── Finetune_HKGCN.py ├── HKGCN_encoder.py ├── Pretrained_HKGCN_009.pth.tar ├── Pretrained_HKGCN_019.pth.tar ├── Pretrained_HKGCN_029.pth.tar ├── Pretrained_HKGCN_039.pth.tar ├── README ├── ReadMe └── pmath.py ├── LGFedAvg ├── README ├── dataset.py ├── lgfed.py ├── model.py ├── options.py └── weight_avg.py ├── MGNN ├── Finetune_MGNN.py ├── MGNN_encoder.py ├── Pretrain_MGNN.py ├── Pretrained_MGNN_009.pth.tar ├── Pretrained_MGNN_019.pth.tar ├── Pretrained_MGNN_029.pth.tar ├── Pretrained_MGNN_039.pth.tar └── README ├── MOON ├── README ├── dataset.py ├── model.py ├── moon.py ├── options.py └── weight_avg.py ├── README.md ├── STAGIN ├── Finetune_STAGIN.py ├── Pretrain_STAGIN.py ├── Pretrained_STAGIN_009.pth.tar ├── Pretrained_STAGIN_019.pth.tar ├── Pretrained_STAGIN_029.pth.tar ├── Pretrained_STAGIN_039.pth.tar ├── README └── STAGIN_encoder.py ├── STGCN ├── Finetune_STGCN.py ├── Pretrain_STGCN.py ├── Pretrained_STAGIN_001.pth.tar ├── Pretrained_STGCN_009.pth.tar ├── Pretrained_STGCN_019.pth.tar ├── Pretrained_STGCN_029.pth.tar ├── Pretrained_STGCN_039.pth.tar ├── README ├── STGCN_encoder.py └── __pycache__ │ └── STGCN_encoder.cpython-39.pyc ├── Software ├── ACTION_Toolbox_Beta_v2.zip ├── ACTION_v2_2025.zip └── README ├── TopologyAwareGraphAugmentation ├── AA_1591checkpointHND_009.pth.tar ├── AA_1591checkpointHND_019.pth.tar ├── AA_1591checkpointHND_029.pth.tar ├── AA_1591checkpointHND_039.pth.tar ├── AA_1591checkpointHND_049.pth.tar ├── AA_1591checkpointWER_009.pth.tar ├── AA_1591checkpointWER_019.pth.tar ├── AA_1591checkpointWER_029.pth.tar ├── AA_1591checkpointWER_039.pth.tar ├── AA_1591checkpointWER_049.pth.tar ├── Finetune_TGA.py ├── Pretrain_TGA.py ├── ReadMe ├── data_source_R.py ├── gnn_encoder.py ├── model_finetune.py └── model_pretrain.py ├── Transformer ├── Finetune_Transformer.py ├── Pretrain_Transformer.py ├── Pretrained_Transformer_009.pth.tar ├── Pretrained_Transformer_019.pth.tar ├── Pretrained_Transformer_029.pth.tar ├── Pretrained_Transformer_039.pth.tar ├── README ├── Transformer_encoder.py └── __pycache__ │ └── Transformer_encoder.cpython-39.pyc ├── manual_ACTION_beta_updated_v2.pdf ├── pFedMe ├── README ├── dataset.py ├── model.py ├── options.py 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