├── .coveragerc ├── .editorconfig ├── .git-blame-ignore-revs ├── .gitattributes ├── .github └── workflows │ └── ci_test.yml ├── .gitignore ├── .pre-commit-config.yaml ├── .readthedocs.yml ├── AUTHORS.rst ├── CHANGELOG-unreleased.md ├── CHANGELOG.md ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.rst ├── HISTORY.rst ├── LICENSE.md ├── MANIFEST.in ├── Makefile ├── README.rst ├── check_ephemeris_connection.py ├── citation.cff ├── codecov.yaml ├── conftest.py ├── docs ├── Makefile ├── _ext │ ├── componentlist.py │ ├── paramtable.py │ └── sitetable.py ├── _static │ └── custom.css ├── _templates │ ├── apidoc │ │ ├── module.rst_t │ │ ├── package.rst_t │ │ └── package.rst_t.aside │ ├── custom-class-template.rst │ └── custom-module-template.rst ├── api.rst ├── authors.rst ├── basic-installation.rst ├── coding-style.rst ├── command-line.rst ├── common-timing-workflow.rst ├── conf.py ├── contributing.rst ├── controlling-logging.rst ├── dependent-packages.rst ├── development-setup.rst ├── editing-documentation.rst ├── examples-rendered │ └── paper_validation_example.ipynb ├── examples │ ├── How_to_build_a_timing_model_component.py │ ├── MCMC_walkthrough.py │ ├── PINT_observatories.py │ ├── PINT_walkthrough.py │ ├── Simulate_and_make_MassMass.py │ ├── Wideband_TOA_walkthrough.py │ ├── WorkingWithFlags.py │ ├── bayesian-example-NGC6440E.py │ ├── bayesian-wideband-example.py │ ├── build_model_from_scratch.py │ ├── check_clock_corrections.py │ ├── check_phase_connection.py │ ├── compare_tempo2_B1855.py │ ├── compare_tempo2_J0613.py │ ├── covariance.py │ ├── example_dmx_ranges.py │ ├── example_pulse_numbers.py │ ├── fit_NGC6440E.py │ ├── fit_NGC6440E_MCMC.py │ ├── noise-fitting-example.py │ ├── phase_offset_example.py │ ├── rednoise-fit-example.py │ ├── simulation_example.py │ ├── solar_wind.py │ ├── time_a_pulsar.py │ ├── understanding_fitters.py │ ├── understanding_parameters.py │ └── understanding_timing_models.py ├── explanation.rst ├── history.rst ├── howto.rst ├── index.rst ├── installation.rst ├── logo │ ├── PINT_LOGO.pdf │ ├── PINT_LOGO.png │ ├── PINT_LOGO.svg │ ├── PINT_LOGO_128trans.png │ ├── PINT_LOGO_64trans.png │ ├── PINT_LOGO_Large.jpg │ ├── PINT_LOGO_Large.pdf │ ├── PINT_LOGO_trans.gif │ └── PINT_LOGO_trans.png ├── make.bat ├── observatory_list.rst ├── reference.rst ├── simple-python-pint-tools.rst ├── tcb2tdb-factors.rst ├── timingmodels.rst ├── tutorials.rst ├── user-questions.rst └── working-with-notebooks.rst ├── examples ├── profiling ├── .gitignore ├── J0740+6620.par ├── NGC6440E.par ├── NGC6440E.tim ├── README.txt ├── bench_MCMC.py ├── bench_chisq_grid.py ├── bench_chisq_grid_WLSFitter.py ├── bench_load_TOAs.py ├── high_level_benchmark.py ├── paper_timing_tables │ ├── J1910+1256_NANOGrav_12yv4.gls.par │ ├── J1910+1256_NANOGrav_12yv4.tim │ ├── NGC6440E.par │ ├── aastex63.cls │ ├── import_statements.py │ ├── papertables.tex │ └── timing_comparison.ipynb ├── prfparser.py └── run_profile.py ├── pyproject.toml ├── pytest.ini ├── requirements.txt ├── requirements_dev.txt ├── setup.py ├── src └── pint │ ├── __init__.py │ ├── bayesian.py │ ├── binaryconvert.py │ ├── config.py │ ├── data │ ├── examples │ │ ├── B1855+09_NANOGrav_9yv1.gls.par │ │ ├── B1855+09_NANOGrav_9yv1.tim │ │ ├── B1855+09_NANOGrav_dfg+12.tim │ │ ├── B1855+09_NANOGrav_dfg+12_TAI.par │ │ ├── J0030+0451_P8_15.0deg_239557517_458611204_ft1weights_GEO_wt.gt.0.4.fits │ │ ├── J0613-sim.par │ │ ├── J0613-sim.tim │ │ ├── J0740+6620.FCP+21.wb.DMX3.0.par │ │ ├── J0740+6620.FCP+21.wb.tim │ │ ├── J1028-5819-example.par │ │ ├── J1028-5819-example.tim │ │ ├── J1614-2230_NANOGrav_12yv3.wb.gls.par │ │ ├── J1614-2230_NANOGrav_12yv3.wb.tim │ │ ├── NGC6440E.par │ │ ├── NGC6440E.par.good │ │ ├── NGC6440E.tim │ │ ├── PSRJ0030+0451_psrcat.par │ │ ├── README.md │ │ ├── templateJ0030.3gauss │ │ ├── test-wb-0.par │ │ ├── test-wb-0.tim │ │ ├── waves.par │ │ └── waves_withpn.tim │ └── runtime │ │ ├── README.md │ │ ├── ecliptic.dat │ │ └── observatories.json │ ├── derived_quantities.py │ ├── erfautils.py │ ├── event_toas.py │ ├── eventstats.py │ ├── exceptions.py │ ├── extern │ ├── __init__.py │ └── _version.py │ ├── fermi_toas.py │ ├── fits_utils.py │ ├── fitter.py │ ├── gridutils.py │ ├── logging.py │ ├── mcmc_fitter.py │ ├── models │ ├── __init__.py │ ├── absolute_phase.py │ ├── astrometry.py │ ├── binary_bt.py │ ├── binary_dd.py │ ├── binary_ddk.py │ ├── binary_ell1.py │ ├── chromatic_model.py │ ├── cmwavex.py │ ├── dispersion_model.py │ ├── dmwavex.py │ ├── expdip.py │ ├── fdjump.py │ ├── frequency_dependent.py │ ├── glitch.py │ ├── ifunc.py │ ├── jump.py │ ├── model_builder.py │ ├── noise_model.py │ ├── parameter.py │ ├── phase_offset.py │ ├── piecewise.py │ ├── priors.py │ ├── pulsar_binary.py │ ├── solar_system_shapiro.py │ ├── solar_wind_dispersion.py │ ├── spindown.py │ ├── stand_alone_psr_binaries │ │ ├── BT_model.py │ │ ├── BT_piecewise.py │ │ ├── DDGR_model.py │ │ ├── DDH_model.py │ │ ├── DDK_model.py │ │ ├── DDS_model.py │ │ ├── DD_model.py │ │ ├── ELL1H_model.py │ │ ├── ELL1_model.py │ │ ├── ELL1k_model.py │ │ ├── __init__.py │ │ ├── binary_generic.py │ │ └── binary_orbits.py │ ├── tcb_conversion.py │ ├── timing_model.py │ ├── troposphere_delay.py │ ├── wave.py │ └── wavex.py │ ├── modelutils.py │ ├── observatory │ ├── __init__.py │ ├── clock_file.py │ ├── global_clock_corrections.py │ ├── satellite_obs.py │ ├── special_locations.py │ └── topo_obs.py │ ├── orbital │ ├── __init__.py │ └── kepler.py │ ├── output │ └── publish.py │ ├── phase.py │ ├── pint_matrix.py │ ├── pintk │ ├── PINT_LOGO_128trans.gif │ ├── __init__.py │ ├── colormodes.py │ ├── paredit.py │ ├── plk.py │ ├── pulsar.py │ └── timedit.py │ ├── plot_utils.py │ ├── polycos.py │ ├── pulsar_ecliptic.py │ ├── pulsar_mjd.py │ ├── random_models.py │ ├── residuals.py │ ├── sampler.py │ ├── scripts │ ├── __init__.py │ ├── compare_parfiles.py │ ├── convert_parfile.py │ ├── event_optimize.py │ ├── event_optimize_MCMCFitter.py │ ├── fermiphase.py │ ├── photonphase.py │ ├── pintbary.py │ ├── pintempo.py │ ├── pintk.py │ ├── pintpublish.py │ ├── t2binary2pint.py │ ├── tcb2tdb.py │ └── zima.py │ ├── simulation.py │ ├── solar_system_ephemerides.py │ ├── templates │ ├── __init__.py │ ├── lcenorm.py │ ├── lceprimitives.py │ ├── lcfitters.py │ ├── lcnorm.py │ ├── lcprimitives.py │ └── lctemplate.py │ ├── toa.py │ ├── toa_select.py │ ├── types.py │ └── utils.py ├── tempo2Test ├── J0000+0000.par ├── J0000+0000.tim ├── J0000+0000_None_delay_good.tim ├── T2output.dat ├── T2spiceTest.py ├── spiceTest.py └── tt2tdbT2.py ├── tests ├── datafile │ ├── 0737A_latest.par │ ├── 2145_swfit.par │ ├── 2145_swfit.tim │ ├── B1509_RXTE_short.fits │ ├── B1855+09_NANOGrav_12yv3.wb.gls.par │ ├── B1855+09_NANOGrav_12yv3.wb.tim │ ├── B1855+09_NANOGrav_9yv1.gls.par │ ├── B1855+09_NANOGrav_9yv1.gls.par.tempo2_test │ ├── B1855+09_NANOGrav_9yv1.tim │ ├── B1855+09_NANOGrav_9yv1_whitened.tempo_test │ ├── B1855+09_NANOGrav_dfg+12.tim │ ├── B1855+09_NANOGrav_dfg+12_DMX.par │ ├── B1855+09_NANOGrav_dfg+12_DMX.par.tempo_test │ ├── B1855+09_NANOGrav_dfg+12_TAI.par │ ├── B1855+09_NANOGrav_dfg+12_TAI.par.tempo_test │ ├── B1855+09_NANOGrav_dfg+12_TAI_FB90.par │ ├── B1855+09_NANOGrav_dfg+12_TAI_FB90.par.tempo2_test │ ├── B1855+09_NANOGrav_dfg+12_modified.par │ ├── B1855+09_NANOGrav_dfg+12_modified.par.tempo_test │ ├── B1855+09_NANOGrav_dfg+12_modified_DD.par │ ├── B1855+09_NANOGrav_dfg+12_modified_DD.par.tempo_test │ ├── B1855+09_polycos.par │ ├── B1855+09_tempo2_gls_pars.json │ ├── B1855_polyco.dat │ ├── B1855_polyco.tim │ ├── B1937+21.CHIME.CHIME.NG.N.tim │ ├── B1937+21.basic.par │ ├── B1953+29_NANOGrav_dfg+12.tim │ ├── B1953+29_NANOGrav_dfg+12_TAI_FB90.par │ ├── B1953+29_NANOGrav_dfg+12_TAI_FB90.par.tempo2_test │ ├── FPorbit_Day6223 │ ├── J0023+0923_NANOGrav_11yv0.gls.par │ ├── J0023+0923_NANOGrav_11yv0.gls.par.resavg │ ├── J0023+0923_NANOGrav_11yv0.gls.par.tempo2_test │ ├── J0023+0923_NANOGrav_11yv0.tim │ ├── J0023+0923_ell1_simple.par │ ├── J0030+0451.mdc1.par │ ├── J0030+0451.mdc1.tim │ ├── J0030+0451_P8_15.0deg_239557517_458611204_ft1weights_GEO_wt.gt.0.4.fits │ ├── J0030+0451_post.par │ ├── J0030+0451_w323_ft1weights.fits │ ├── J0218_nicer_2070030405_cleanfilt_cut_bary.evt │ ├── J0437-4715.par │ ├── J0613-0200_NANOGrav_9yv1.gls.par │ ├── J0613-0200_NANOGrav_9yv1.tim │ ├── J0613-0200_NANOGrav_9yv1_ELL1H.gls.par │ ├── J0613-0200_NANOGrav_9yv1_ELL1H_STIG.gls.par │ ├── J0613-0200_NANOGrav_dfg+12.tim │ ├── J0613-0200_NANOGrav_dfg+12_TAI_FB90.par │ ├── J0613-0200_NANOGrav_dfg+12_TAI_FB90.par.tempo2_test │ ├── J1048+2339_3PC_fake.tim │ ├── J1048+2339_orbwaves.par │ ├── J1048+2339_orbwaves_DD.par │ ├── J1513-5908_PKS_alldata_white.par │ ├── J1600-3053_test.par │ ├── J1614-2230_NANOGrav_12yv3.wb.gls.par │ ├── J1614-2230_NANOGrav_12yv3.wb.tempo_test │ ├── J1614-2230_NANOGrav_12yv3.wb.tim │ ├── J1643-1224_NANOGrav_9yv1.gls.par │ ├── J1643-1224_NANOGrav_9yv1.tim │ ├── J1713+0747_NANOGrav_11yv0.gls.par │ ├── J1713+0747_NANOGrav_11yv0.gls.par.tempo_test │ ├── J1713+0747_NANOGrav_11yv0_short.gls.ICRS.par │ ├── J1713+0747_NANOGrav_11yv0_short.gls.ICRS.par.libstempo │ ├── J1713+0747_NANOGrav_11yv0_short.gls.par │ ├── J1713+0747_NANOGrav_11yv0_short.gls.par.libstempo │ ├── J1713+0747_NANOGrav_11yv0_short.tim │ ├── J1713+0747_ddk_simple.par │ ├── J1713+0747_small.gls.par │ ├── J1713+0747_small.tim │ ├── J1737+0811_bt_simple.par │ ├── J1744-1134.Rcvr1_2.GASP.8y.x.tim │ ├── J1744-1134.basic.ecliptic.par │ ├── J1744-1134.basic.par │ ├── J1744-1134.basic.par.tempo2_test │ ├── J1744-1134.basic2.par │ ├── J1744-1134.t1.par │ ├── J1744-1134.t1.par.tempo_test │ ├── J1853+1303_NANOGrav_11yv0.gls.par │ ├── J1853+1303_NANOGrav_11yv0.gls.par.tempo2_test │ ├── J1853+1303_NANOGrav_11yv0.tim │ ├── J1909-3744.NB.par │ ├── J1909-3744.NB.tim │ ├── J1923+2515_NANOGrav_9yv1.gls.par │ ├── J1923+2515_NANOGrav_9yv1.tim │ ├── J1955+2908_dd_simple.par │ ├── J1955dd.par │ ├── J2229+2643_dm1.par │ ├── J2317+1439_ell1h_simple.par │ ├── NGC6440E.itoa │ ├── NGC6440E.par │ ├── NGC6440E.tim │ ├── NGC6440E_PHASETEST.par │ ├── NGC6440E_PHASETEST.tim │ ├── PSRJ0030+0451_psrcat.par │ ├── PSR_J0218+4232.par │ ├── de118.bsp │ ├── ecorr_fit_test.par │ ├── ecorr_fit_test.tim │ ├── evtfiles.txt │ ├── get_tempo2_result.py │ ├── get_tempo_result.py │ ├── j0007_ifunc.par │ ├── j0007_ifunc.tim │ ├── lat_spacecraft_weekly_w323_p202_v001.fits │ ├── make_J1713_libstempo.py │ ├── ngc300nicer.par │ ├── ngc300nicer_bary.evt │ ├── ngc300nicernoTZR.par │ ├── observatory │ │ ├── aliases │ │ ├── observatories.dat │ │ ├── obsys.dat │ │ ├── oldcodes.dat │ │ └── tempo.aliases │ ├── parkes.toa │ ├── piecewise.par │ ├── piecewise.tim │ ├── piecewise_twocomps.par │ ├── prefixtest.par │ ├── prefixtest.tim │ ├── sgr1830.orb │ ├── sgr1830.par │ ├── sgr1830kgfilt.evt │ ├── slug.par │ ├── slug.tim │ ├── templateJ0030.3gauss │ ├── template_phases.asc │ ├── test1.tim │ ├── test2.tim │ ├── test_FD.par │ ├── test_FD.par.tempo_test │ ├── test_FD.simulate │ ├── test_FD.simulate.pint_corrected │ ├── test_par_read.par │ ├── testtimes.par │ ├── testtimes.par.tempo2_test │ ├── testtimes.tim │ ├── vela_wave.par │ ├── vela_wave.tim │ ├── withpn.par │ ├── withpn.tim │ ├── wsrt2gps.clk │ └── zerophase.tim ├── htmlcov ├── pinttestdata.py ├── simulate_FD_model.py ├── test_B1855.py ├── test_B1855_9yrs.py ├── test_B1953.py ├── test_BT_piecewise.py ├── test_Galactic.py ├── test_J0613.py ├── test_TDB_method.py ├── test_absphase.py ├── test_all_component_and_model_builder.py ├── test_astrometry.py ├── test_astropy_observatory.py ├── test_astropy_times.py ├── test_astropy_version.py ├── test_barytoa.py ├── test_bayesian.py ├── test_binary_generic.py ├── test_binconvert.py ├── test_change_epoch.py ├── test_chi2inpar.py ├── test_chromatic.py ├── test_clock_file.py ├── test_clockcorr.py ├── test_cmwavex.py ├── test_cmx.py ├── test_combine_design_matrices_by_param.py ├── test_compare.py ├── test_compare_model.py ├── test_compare_model_ecl_vs_icrs.py ├── test_convert_parfile.py ├── test_copy.py ├── test_covariance_matrix.py ├── test_d_phase_d_toa.py ├── test_datafiles.py ├── test_dd.py ├── test_ddgr.py ├── test_ddh.py ├── test_ddk.py ├── test_dds.py ├── test_density.py ├── test_derivative_utils.py ├── test_derived_quantities.py ├── test_derivedparams.py ├── test_design_matrix.py ├── test_designmatrix_noisepars.py ├── test_determinism.py ├── test_dmefac_dmequad.py ├── test_dmwavex.py ├── test_dmx.py ├── test_dmxrange_add_sub.py ├── test_downhill_fitter.py ├── test_early_chime_data.py ├── test_ecorr_average.py ├── test_ell1h.py ├── test_ell1k.py ├── test_erfautils.py ├── test_event_optimize.py ├── test_event_optimize_MCMCFitter.py ├── test_event_toas.py ├── test_eventstats.py ├── test_expdip.py ├── test_explicit_absphase.py ├── test_fake_toas.py ├── test_fbx.py ├── test_fd.py ├── test_fdjump.py ├── test_fermiphase.py ├── test_find_clock_file.py ├── test_fitter.py ├── test_fitter_compare.py ├── test_fitter_error_checking.py ├── test_flagging_clustering.py ├── test_funcpar.py ├── test_glitch.py ├── test_global_clock_corrections.py ├── test_gls_fitter.py ├── test_grid.py ├── test_iers_behaviour.py ├── test_infostrings.py ├── test_jump.py ├── test_kepler.py ├── test_leapsec.py ├── test_local_ephem.py ├── test_mask_parameter.py ├── test_mcmcfitter.py ├── test_model.py ├── test_model_derivatives.py ├── test_model_ifunc.py ├── test_model_manual.py ├── test_model_wave.py ├── test_modelconversions.py ├── test_modeloverride.py ├── test_modelutils.py ├── test_new_observatories.py ├── test_noise_models.py ├── test_noisefit.py ├── test_numpy.py ├── test_observatory.py ├── test_observatory_envar.py ├── test_observatory_metadata.py ├── test_orbit_phase.py ├── test_orbwaves.py ├── test_parameter_covariance_matrix.py ├── test_parameters.py ├── test_parchange.py ├── test_parfile.py ├── test_parfile_writing.py ├── test_parfile_writing_format.py ├── test_parunits.py ├── test_pb.py ├── test_phase.py ├── test_phase_commands.py ├── test_phase_offset.py ├── test_phaseogram.py ├── test_photonphase.py ├── test_pickle.py ├── test_piecewise.py ├── test_pintbary.py ├── test_pintempo.py ├── test_pintk.py ├── test_pintk_pulsar.py ├── test_plchromnoise.py ├── test_pldmnoise.py ├── test_plk_widget.py ├── test_plot_utils.py ├── test_plrednoise.py ├── test_pmtransform_units.py ├── test_polycos.py ├── test_precision.py ├── test_prefix_param_inheritance.py ├── test_priors.py ├── test_process_parfile.py ├── test_publish.py ├── test_pulsar_mjd.py ├── test_pulsar_position.py ├── test_pulse_number.py ├── test_random_models.py ├── test_reduced_precision.py ├── test_residuals.py ├── test_rv.py ├── test_satobs.py ├── test_sini.py ├── test_solar_system_body.py ├── test_solar_wind.py ├── test_solarsystemshapiro.py ├── test_spindown.py ├── test_stigma.py ├── test_t2binary2pint.py ├── test_tcb2tdb.py ├── test_templates.py ├── test_tempox_compatibility.py ├── test_tim_writing.py ├── test_times.py ├── test_timing_model.py ├── test_toa.py ├── test_toa_create.py ├── test_toa_flag.py ├── test_toa_indexing.py ├── test_toa_pickle.py ├── test_toa_reader.py ├── test_toa_selection.py ├── test_toa_shuffle.py ├── test_toa_writer.py ├── test_troposphere_model.py ├── test_utils.py ├── test_variety_parfiles.py ├── test_version.py ├── test_wavex.py ├── test_widebandTOA_fitting.py ├── test_wideband_dm_data.py ├── test_wls_fitter.py ├── test_wx2pl.py ├── test_zima.py └── utils.py ├── tox.ini ├── validation ├── B1855+09_NANOGrav_9yv1.gls_ori.par ├── B1855+09_NANOGrav_9yv1.gls_ptb.par ├── J0340+4130_NANOGrav_9yv1.gls_ori.par ├── J0340+4130_NANOGrav_9yv1.gls_ptb.par ├── J0613-0200_NANOGrav_9yv1.gls_ori.par ├── J0613-0200_NANOGrav_9yv1.gls_ptb.par └── wls_vs_gls.py └── versioneer.py /.coveragerc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nanograv/PINT/HEAD/.coveragerc 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