├── .gitignore ├── .gitmodules ├── COPYRIGHT ├── LICENSE.md ├── ONT_logo.png ├── README.md ├── Snakefile ├── coastguard.yml ├── config.yml ├── configs ├── .gitignore ├── config_Dmel.yml ├── config_SIRV.yml └── config_SIRV_1D2.yml ├── env.yml ├── misc ├── gffcompare_Dmel.png └── gffcompare_SIRV_E0.png └── snakelib ├── .gitignore └── utils.snake /.gitignore: -------------------------------------------------------------------------------- 1 | *.pyc 2 | -------------------------------------------------------------------------------- /.gitmodules: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nanoporetech/pipeline-pinfish-analysis/HEAD/.gitmodules -------------------------------------------------------------------------------- /COPYRIGHT: -------------------------------------------------------------------------------- 1 | 2 | (c) 2018 Oxford Nanopore Technologies Ltd. 3 | 4 | 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