├── .editorconfig ├── .github ├── ISSUE_TEMPLATE.md └── workflows │ ├── ci.yml │ └── publish.yml ├── .gitignore ├── .readthedocs.yaml ├── LICENSE ├── README.rst ├── docs ├── Makefile ├── conf.py ├── index.rst └── requirements.txt ├── examples ├── noisy_and_jumpy_lorenz.py └── noisy_lorenz.py ├── jitcsde ├── __init__.py ├── _jitcsde.py ├── _python_core.py ├── jitced_template.c ├── random_numbers.c └── sympy_symbols.py ├── pyproject.toml └── tests ├── Butcher.py ├── Butcher_SRA.py ├── all_tests.sh ├── compare_C_and_Python_core.py ├── kmc.py ├── test_integration_speed.py ├── test_jitcsde.py ├── test_jumps.py ├── test_python_core.py ├── test_step_functions.py ├── test_sympy_input.py └── validation.py /.editorconfig: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/.editorconfig -------------------------------------------------------------------------------- /.github/ISSUE_TEMPLATE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/.github/ISSUE_TEMPLATE.md -------------------------------------------------------------------------------- /.github/workflows/ci.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/.github/workflows/ci.yml -------------------------------------------------------------------------------- /.github/workflows/publish.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/.github/workflows/publish.yml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/.gitignore -------------------------------------------------------------------------------- /.readthedocs.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/.readthedocs.yaml -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/LICENSE -------------------------------------------------------------------------------- /README.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/README.rst -------------------------------------------------------------------------------- /docs/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/docs/Makefile -------------------------------------------------------------------------------- /docs/conf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/docs/conf.py -------------------------------------------------------------------------------- /docs/index.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/docs/index.rst -------------------------------------------------------------------------------- /docs/requirements.txt: -------------------------------------------------------------------------------- 1 | numpydoc 2 | setuptools_scm 3 | jitcsde 4 | -------------------------------------------------------------------------------- /examples/noisy_and_jumpy_lorenz.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/examples/noisy_and_jumpy_lorenz.py -------------------------------------------------------------------------------- /examples/noisy_lorenz.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/examples/noisy_lorenz.py -------------------------------------------------------------------------------- /jitcsde/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/jitcsde/__init__.py -------------------------------------------------------------------------------- /jitcsde/_jitcsde.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/jitcsde/_jitcsde.py -------------------------------------------------------------------------------- /jitcsde/_python_core.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/jitcsde/_python_core.py -------------------------------------------------------------------------------- /jitcsde/jitced_template.c: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/jitcsde/jitced_template.c -------------------------------------------------------------------------------- /jitcsde/random_numbers.c: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/jitcsde/random_numbers.c -------------------------------------------------------------------------------- /jitcsde/sympy_symbols.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/jitcsde/sympy_symbols.py -------------------------------------------------------------------------------- /pyproject.toml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/pyproject.toml -------------------------------------------------------------------------------- /tests/Butcher.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/Butcher.py -------------------------------------------------------------------------------- /tests/Butcher_SRA.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/Butcher_SRA.py -------------------------------------------------------------------------------- /tests/all_tests.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/all_tests.sh -------------------------------------------------------------------------------- /tests/compare_C_and_Python_core.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/compare_C_and_Python_core.py -------------------------------------------------------------------------------- /tests/kmc.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/kmc.py -------------------------------------------------------------------------------- /tests/test_integration_speed.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/test_integration_speed.py -------------------------------------------------------------------------------- /tests/test_jitcsde.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/test_jitcsde.py -------------------------------------------------------------------------------- /tests/test_jumps.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/test_jumps.py -------------------------------------------------------------------------------- /tests/test_python_core.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/test_python_core.py -------------------------------------------------------------------------------- /tests/test_step_functions.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/test_step_functions.py -------------------------------------------------------------------------------- /tests/test_sympy_input.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/test_sympy_input.py -------------------------------------------------------------------------------- /tests/validation.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neurophysik/jitcsde/HEAD/tests/validation.py --------------------------------------------------------------------------------