├── .github └── workflows │ └── check_on_PR.yml ├── .gitignore ├── .travis.yml ├── Dockerfile ├── LICENSE ├── MANIFEST.in ├── README.md ├── README.rst ├── doc ├── Makefile ├── api.rst ├── conf.py ├── how_to_wrap.rst ├── img │ └── tiny_all_input_doors.png ├── index.rst └── tutorial.rst ├── examples ├── README.txt ├── params_bct_graph.json ├── params_connectivity.json ├── params_dyn_graph.json ├── params_graph.json ├── params_nii.json ├── plot_conmat_to_bct_graph.py ├── plot_conmat_to_graph.py ├── plot_inv_ts_to_bct_graph.py ├── plot_inv_ts_to_graph.py ├── plot_nii_to_dyn_graph.py └── plot_nii_to_graph.py ├── graphpype ├── __init__.py ├── _version.py ├── data_test_servers.json ├── gather │ ├── __init__.py │ ├── gather_cormats.py │ └── gather_permuts.py ├── interfaces │ ├── __init__.py │ ├── bct │ │ ├── __init__.py │ │ ├── bct.py │ │ └── tests │ │ │ └── test_bct.py │ └── radatools │ │ ├── __init__.py │ │ ├── rada.py │ │ └── tests │ │ └── test_rada.py ├── labeled_mask.py ├── nodes │ ├── __init__.py │ ├── coclass.py │ ├── correl_mat.py │ ├── graph_stats.py │ ├── modularity.py │ └── tests │ │ ├── test_correl_mat.py │ │ └── test_modularity.py ├── pipelines │ ├── __init__.py │ ├── conmat_to_graph.py │ ├── intmat_to_graph.py │ ├── nii_to_conmat.py │ └── tests │ │ ├── test_conmat_to_graph.py │ │ └── test_nii_to_conmat.py ├── tests │ ├── test_labeled_mask.py │ ├── test_utils.py │ ├── test_utils_cor.py │ ├── test_utils_dtype_coord.py │ ├── test_utils_img.py │ ├── test_utils_mod.py │ ├── test_utils_net.py │ ├── test_utils_plot.py │ ├── test_utils_stats.py │ ├── test_utils_tests.py │ └── test_utils_visbrain.py ├── utils.py ├── utils_cor.py ├── utils_dtype_coord.py ├── utils_img.py ├── utils_mod.py ├── utils_net.py ├── utils_plot.py ├── utils_stats.py ├── utils_tests.py └── utils_visbrain.py └── setup.py /.github/workflows/check_on_PR.yml: -------------------------------------------------------------------------------- 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-------------------------------------------------------------------------------- https://raw.githubusercontent.com/neuropycon/graphpype/HEAD/LICENSE -------------------------------------------------------------------------------- /MANIFEST.in: -------------------------------------------------------------------------------- 1 | 2 | include graphpype/utils/*.json -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neuropycon/graphpype/HEAD/README.md -------------------------------------------------------------------------------- /README.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/neuropycon/graphpype/HEAD/README.rst -------------------------------------------------------------------------------- /doc/Makefile: 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