├── .github └── workflows │ └── build.yml ├── .gitignore ├── COPYING ├── Makefile ├── README.md ├── gradle └── wrapper │ ├── gradle-wrapper.jar │ └── gradle-wrapper.properties ├── gradlew ├── launch.sh ├── nextflow.config ├── plugins ├── build.gradle └── nf-hello │ ├── build.gradle │ └── src │ ├── main │ └── nextflow │ │ └── hello │ │ ├── HelloConfig.groovy │ │ ├── HelloExtension.groovy │ │ ├── HelloFactory.groovy │ │ ├── HelloObserver.groovy │ │ └── HelloPlugin.groovy │ ├── resources │ └── META-INF │ │ ├── MANIFEST.MF │ │ └── extensions.idx │ └── test │ └── nextflow │ └── hello │ ├── HelloDslTest.groovy │ ├── HelloFactoryTest.groovy │ ├── MockHelpers.groovy │ └── TestHelper.groovy └── settings.gradle /.github/workflows/build.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/.github/workflows/build.yml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/.gitignore -------------------------------------------------------------------------------- /COPYING: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/COPYING -------------------------------------------------------------------------------- /Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/Makefile -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/README.md -------------------------------------------------------------------------------- /gradle/wrapper/gradle-wrapper.jar: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/gradle/wrapper/gradle-wrapper.jar -------------------------------------------------------------------------------- /gradle/wrapper/gradle-wrapper.properties: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/gradle/wrapper/gradle-wrapper.properties -------------------------------------------------------------------------------- /gradlew: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/gradlew -------------------------------------------------------------------------------- /launch.sh: -------------------------------------------------------------------------------- 1 | export NXF_PLUGINS_DEV=$PWD/plugins 2 | ../nextflow/launch.sh "$@" 3 | -------------------------------------------------------------------------------- /nextflow.config: -------------------------------------------------------------------------------- 1 | plugins { 2 | id 'nf-hello' 3 | } -------------------------------------------------------------------------------- /plugins/build.gradle: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/build.gradle -------------------------------------------------------------------------------- /plugins/nf-hello/build.gradle: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/build.gradle -------------------------------------------------------------------------------- /plugins/nf-hello/src/main/nextflow/hello/HelloConfig.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/main/nextflow/hello/HelloConfig.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/main/nextflow/hello/HelloExtension.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/main/nextflow/hello/HelloExtension.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/main/nextflow/hello/HelloFactory.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/main/nextflow/hello/HelloFactory.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/main/nextflow/hello/HelloObserver.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/main/nextflow/hello/HelloObserver.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/main/nextflow/hello/HelloPlugin.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/main/nextflow/hello/HelloPlugin.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/resources/META-INF/MANIFEST.MF: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/resources/META-INF/MANIFEST.MF -------------------------------------------------------------------------------- /plugins/nf-hello/src/resources/META-INF/extensions.idx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/resources/META-INF/extensions.idx -------------------------------------------------------------------------------- /plugins/nf-hello/src/test/nextflow/hello/HelloDslTest.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/test/nextflow/hello/HelloDslTest.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/test/nextflow/hello/HelloFactoryTest.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/test/nextflow/hello/HelloFactoryTest.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/test/nextflow/hello/MockHelpers.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/test/nextflow/hello/MockHelpers.groovy -------------------------------------------------------------------------------- /plugins/nf-hello/src/test/nextflow/hello/TestHelper.groovy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/plugins/nf-hello/src/test/nextflow/hello/TestHelper.groovy -------------------------------------------------------------------------------- /settings.gradle: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/nf-hello/HEAD/settings.gradle --------------------------------------------------------------------------------