├── .dockerignore ├── .gitignore ├── README.md ├── assets ├── MethylSeq_report.html ├── MethylSeq_timeline.html └── multiqc_report.html ├── data └── ggal │ ├── gut_1.fq │ ├── gut_2.fq │ ├── liver_1.fq │ ├── liver_2.fq │ ├── lung_1.fq │ ├── lung_2.fq │ └── transcriptome.fa ├── nextflow.config ├── script1.nf ├── script2.nf ├── script3.nf ├── script4.nf ├── script5.nf ├── script6.nf └── script7.nf /.dockerignore: -------------------------------------------------------------------------------- 1 | .git 2 | .nextflow 3 | * 4 | -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- 1 | .git 2 | .nextflow* 3 | work 4 | result* 5 | -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nextflow-io/rmghc-2018/HEAD/README.md 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