├── .gitignore ├── README.md ├── data ├── hmdp.liver.K.npdump ├── hmdp.liver.exprs ├── hmdp.liver.exprs.1 ├── hmdp.liver.snps ├── hmdp.liver.snps.1000.npdump ├── hmdp.liver.snps.npdump ├── hmdp.liver.strains ├── snps.132k.clean.noX.bed ├── snps.132k.clean.noX.bim ├── snps.132k.clean.noX.fake.phenos ├── snps.132k.clean.noX.fam └── snps.132k.clean.noX.pylmm.kin ├── pylmm ├── __init__.py ├── input.py ├── lmm.py └── misc.py ├── requirements.txt ├── scripts ├── example.py ├── pylmmGWAS.py └── pylmmKinship.py └── setup.py /.gitignore: -------------------------------------------------------------------------------- 1 | *.pyc 2 | data/* 3 | -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/nickFurlotte/pylmm/HEAD/README.md -------------------------------------------------------------------------------- /data/hmdp.liver.K.npdump: 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