├── .gitignore ├── LICENSE ├── README.md ├── assets ├── flowchart-1695271438396-1.svg └── ga.png ├── data ├── .gitkeep ├── dataset1200.json ├── dataset_append_1142.json └── example_dataset.json ├── models └── .gitkeep ├── preprocess.py ├── test.py ├── train.py └── utils ├── augmentation.py ├── cluster.py ├── dataset.py ├── densenet3d.py ├── encode.py ├── interface.py ├── readPDB.py ├── record.py ├── resnet3d.py └── structure.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ohuelab/SpatialPPI/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ohuelab/SpatialPPI/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: 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