├── .gitignore ├── README.md ├── command_line_interface.ipynb ├── compartments_and_saddles.ipynb ├── contacts_vs_distance.ipynb ├── dots.ipynb ├── environment.yml ├── insulation_and_boundaries.ipynb ├── pileup_CTCF.ipynb └── viz.ipynb /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/.gitignore -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/README.md -------------------------------------------------------------------------------- /command_line_interface.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/command_line_interface.ipynb -------------------------------------------------------------------------------- /compartments_and_saddles.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/compartments_and_saddles.ipynb -------------------------------------------------------------------------------- /contacts_vs_distance.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/contacts_vs_distance.ipynb -------------------------------------------------------------------------------- /dots.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/dots.ipynb -------------------------------------------------------------------------------- /environment.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/environment.yml -------------------------------------------------------------------------------- /insulation_and_boundaries.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/insulation_and_boundaries.ipynb -------------------------------------------------------------------------------- /pileup_CTCF.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/pileup_CTCF.ipynb -------------------------------------------------------------------------------- /viz.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/open2c/open2c_examples/HEAD/viz.ipynb --------------------------------------------------------------------------------