├── .gitignore ├── LICENSE ├── README.md ├── clean.sh ├── hpg-pore.sh ├── pom.xml └── src └── main ├── java └── org │ └── opencb │ └── hpg_pore │ ├── EventsCmd.java │ ├── ExportCmd.java │ ├── Fast5NamesCmd.java │ ├── FastaCmd.java │ ├── FastqCmd.java │ ├── Main.java │ ├── NativePoreSupport.java │ ├── SignalCmd.java │ ├── StatsCmd.java │ ├── Utils.java │ ├── commandline │ ├── EventsCommandLine.java │ ├── ExportCommandLine.java │ ├── Fast5NamesCommandLine.java │ ├── FastaCommandLine.java │ ├── FastqCommandLine.java │ ├── ImportCommandLine.java │ ├── SignalCommandLine.java │ └── StatsCommandLine.java │ └── hadoop │ ├── HadoopFastaCmd.java │ ├── HadoopFastqCmd.java │ ├── HadoopImportCmd.java │ ├── HadoopStatsCmd.java │ ├── ParamsforDraw.java │ └── StatsWritable.java ├── native ├── build-native-lib.sh ├── org_opencb_hpg_pore_NativePoreSupport.c ├── org_opencb_hpg_pore_NativePoreSupport.h ├── test.c ├── test_events.c ├── utils.c └── utils.h └── third-party └── hdf5-1.8.14 ├── ACKNOWLEDGMENTS ├── CMakeFilters.cmake ├── CMakeInstallation.cmake ├── CMakeLists.txt ├── COPYING ├── CTestConfig.cmake ├── MANIFEST ├── Makefile ├── Makefile.am ├── Makefile.dist ├── Makefile.in ├── README.txt ├── UserMacros.cmake ├── aclocal.m4 ├── acsite.m4 ├── bin ├── COPYING ├── buildhdf5 ├── chkmanifest ├── cmakehdf5 ├── compile ├── config.guess ├── config.sub ├── depcomp ├── dependencies ├── deploy ├── distdep ├── h5vers ├── install-sh ├── iostats ├── locate_sw ├── ltmain.sh ├── make_err ├── make_overflow ├── make_vers ├── makehelp ├── missing ├── mkdirs ├── mkinstalldirs ├── newer ├── output_filter.sh ├── release ├── snapshot ├── test-driver ├── trace └── yodconfigure ├── c++ ├── CMakeLists.txt ├── COPYING ├── Makefile ├── Makefile.am ├── Makefile.in ├── examples │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── chunks.cpp │ ├── compound.cpp │ ├── create.cpp │ ├── expected.out │ ├── extend_ds.cpp │ ├── h5group.cpp │ ├── h5tutr_cmprss.cpp │ ├── h5tutr_crtatt.cpp │ ├── h5tutr_crtdat.cpp │ ├── h5tutr_crtgrp.cpp │ ├── h5tutr_crtgrpar.cpp │ ├── h5tutr_crtgrpd.cpp │ ├── h5tutr_extend.cpp │ ├── h5tutr_rdwt.cpp │ ├── h5tutr_subset.cpp │ ├── readdata.cpp │ ├── run-c++-ex.sh │ ├── run-c++-ex.sh.in │ ├── testh5c++.sh │ ├── testh5c++.sh.in │ └── writedata.cpp ├── src │ ├── .deps │ │ ├── H5AbstractDs.Plo │ │ ├── H5ArrayType.Plo │ │ ├── H5AtomType.Plo │ │ ├── H5Attribute.Plo │ │ ├── H5CommonFG.Plo │ │ ├── H5CompType.Plo │ │ ├── H5DataSet.Plo │ │ ├── H5DataSpace.Plo │ │ ├── H5DataType.Plo │ │ ├── H5DcreatProp.Plo │ │ ├── H5DxferProp.Plo │ │ ├── H5EnumType.Plo │ │ ├── H5Exception.Plo │ │ ├── H5FaccProp.Plo │ │ ├── H5FcreatProp.Plo │ │ ├── H5File.Plo │ │ ├── H5FloatType.Plo │ │ ├── H5Group.Plo │ │ ├── H5IdComponent.Plo │ │ ├── H5IntType.Plo │ │ ├── H5Library.Plo │ │ ├── H5Location.Plo │ │ ├── H5Object.Plo │ │ ├── H5PredType.Plo │ │ ├── H5PropList.Plo │ │ ├── H5StrType.Plo │ │ └── H5VarLenType.Plo │ ├── CMakeLists.txt │ ├── H5AbstractDs.cpp │ ├── H5AbstractDs.h │ ├── H5Alltypes.h │ ├── H5ArrayType.cpp │ ├── H5ArrayType.h │ ├── H5AtomType.cpp │ ├── H5AtomType.h │ ├── H5Attribute.cpp │ ├── H5Attribute.h │ ├── H5Classes.h │ ├── H5CommonFG.cpp │ ├── H5CommonFG.h │ ├── H5CompType.cpp │ ├── H5CompType.h │ ├── H5Cpp.h │ ├── H5CppDoc.h │ ├── H5DataSet.cpp │ ├── H5DataSet.h │ ├── H5DataSpace.cpp │ ├── H5DataSpace.h │ ├── H5DataType.cpp │ ├── H5DataType.h │ ├── H5DcreatProp.cpp │ ├── H5DcreatProp.h │ ├── H5DxferProp.cpp │ ├── H5DxferProp.h │ ├── H5EnumType.cpp │ ├── H5EnumType.h │ ├── H5Exception.cpp │ ├── H5Exception.h │ ├── H5FaccProp.cpp │ ├── H5FaccProp.h │ ├── H5FcreatProp.cpp │ ├── H5FcreatProp.h │ ├── H5File.cpp │ ├── H5File.h │ ├── H5FloatType.cpp │ ├── H5FloatType.h │ ├── H5Group.cpp │ ├── H5Group.h │ ├── H5IdComponent.cpp │ ├── H5IdComponent.h │ ├── H5Include.h │ ├── H5IntType.cpp │ ├── H5IntType.h │ ├── H5Library.cpp │ ├── H5Library.h │ ├── H5Location.cpp │ ├── H5Location.h │ ├── H5Object.cpp │ ├── H5Object.h │ ├── H5PredType.cpp │ ├── H5PredType.h │ ├── H5PropList.cpp │ ├── H5PropList.h │ ├── H5StrType.cpp │ ├── H5StrType.h │ ├── H5VarLenType.cpp │ ├── H5VarLenType.h │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── RM_stylesheet.css │ ├── cpp_doc_config │ ├── h5c++ │ ├── h5c++.in │ ├── header.html │ └── header_files │ │ ├── filelist.xml │ │ ├── hdf_logo.jpg │ │ ├── help.jpg │ │ ├── image001.jpg │ │ └── image002.jpg └── test │ ├── .deps │ ├── dsets.Po │ ├── h5cpputil.Po │ ├── tattr.Po │ ├── tcompound.Po │ ├── tdspl.Po │ ├── testhdf5.Po │ ├── tfile.Po │ ├── tfilter.Po │ ├── th5s.Po │ ├── tlinks.Po │ ├── tobject.Po │ ├── trefer.Po │ ├── ttypes.Po │ └── tvlstr.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── H5srcdir_str.h │ ├── H5srcdir_str.h.in │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── dsets.cpp │ ├── h5cpputil.cpp │ ├── h5cpputil.h │ ├── tattr.cpp │ ├── tcompound.cpp │ ├── tdspl.cpp │ ├── testhdf5.cpp │ ├── tfile.cpp │ ├── tfilter.cpp │ ├── th5s.cpp │ ├── th5s.h5 │ ├── tlinks.cpp │ ├── tobject.cpp │ ├── trefer.cpp │ ├── ttypes.cpp │ └── tvlstr.cpp ├── config.log ├── config.lt ├── config.status ├── config ├── BlankForm ├── COPYING ├── Makefile.am.blank ├── apple ├── cmake │ ├── CTestCustom.cmake │ ├── ConfigureChecks.cmake │ ├── ConversionTests.c │ ├── FindHDF5.cmake.in │ ├── H5cxx_config.h.in │ ├── H5pubconf.h.in │ ├── HDF518_Examples.cmake.in │ ├── HDF5Macros.cmake │ ├── PkgInfo.in │ ├── README.txt.cmake.in │ ├── UserMacros │ │ └── Windows_MT.cmake │ ├── cacheinit.cmake │ ├── hdf5-config-version.cmake.in │ ├── hdf5-config.cmake.build.in │ ├── hdf5-config.cmake.install.in │ ├── libhdf5.settings.cmake.in │ ├── mccacheinit.cmake │ ├── userblockTest.cmake │ └── vfdTest.cmake ├── cmake_ext_mod │ ├── CPack.Info.plist.in │ ├── CTestCustom.cmake │ ├── CheckTypeSize.cmake │ ├── ConfigureChecks.cmake │ ├── FindMPI.cmake │ ├── FindSZIP.cmake │ ├── GetTimeOfDayTest.cpp │ ├── HDFCXXTests.cpp │ ├── HDFLibMacros.cmake │ ├── HDFMacros.cmake │ ├── HDFTests.c │ ├── HDFUseFortran.cmake │ ├── NSIS.InstallOptions.ini.in │ ├── NSIS.template.in │ ├── grepTest.cmake │ ├── hdf.bmp │ ├── hdf.icns │ ├── hdf.ico │ ├── prunTest.cmake │ ├── runTest.cmake │ └── version.plist.in ├── commence.am ├── conclude.am ├── craynv ├── dec-flags ├── examples.am ├── freebsd ├── gnu-fflags ├── gnu-flags ├── hpux11.23 ├── i386-pc-cygwin32 ├── i686-pc-cygwin ├── ia64-linux-gnu ├── ibm-aix ├── ibm-flags ├── intel-fflags ├── intel-flags ├── irix6.x ├── linux-gnu ├── linux-gnuaout ├── linux-gnulibc1 ├── linux-gnulibc2 ├── lt_vers.am ├── nec-superux14.1 ├── pgi-fflags ├── pgi-flags ├── powerpc-ibm-aix5.x ├── site-specific │ └── BlankForm ├── solaris2.x ├── stamp1 ├── stamp2 ├── sv1-cray ├── x86_64-pc-cygwin └── x86_64-redstorm-linux-gnu ├── configure ├── configure.ac ├── examples ├── Attributes.txt ├── CMakeLists.txt ├── CMakeTests.cmake ├── Makefile ├── Makefile.am ├── Makefile.in ├── README ├── h5_attribute.c ├── h5_chunk_read.c ├── h5_cmprss.c ├── h5_compound.c ├── h5_crtatt.c ├── h5_crtdat.c ├── h5_crtgrp.c ├── h5_crtgrpar.c ├── h5_crtgrpd.c ├── h5_drivers.c ├── h5_dtransform.c ├── h5_elink_unix2win.c ├── h5_extend.c ├── h5_extend_write.c ├── h5_extlink.c ├── h5_group.c ├── h5_interm_group.c ├── h5_mount.c ├── h5_rdwt.c ├── h5_read.c ├── h5_ref2reg.c ├── h5_reference.c ├── h5_select.c ├── h5_shared_mesg.c ├── h5_subset.c ├── h5_write.c ├── ph5example.c ├── run-all-ex.sh ├── run-c-ex.sh ├── run-c-ex.sh.in ├── testh5cc.sh └── testh5cc.sh.in ├── fortran ├── CMakeLists.txt ├── COPYING ├── Makefile ├── Makefile.am ├── Makefile.in ├── examples │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── compound.f90 │ ├── compound_complex_fortran2003.f90 │ ├── compound_fortran2003.f90 │ ├── h5_cmprss.f90 │ ├── h5_crtatt.f90 │ ├── h5_crtdat.f90 │ ├── h5_crtgrp.f90 │ ├── h5_crtgrpar.f90 │ ├── h5_crtgrpd.f90 │ ├── h5_extend.f90 │ ├── h5_rdwt.f90 │ ├── h5_subset.f90 │ ├── hyperslab.f90 │ ├── mountexample.f90 │ ├── nested_derived_type.f90 │ ├── ph5example.f90 │ ├── refobjexample.f90 │ ├── refregexample.f90 │ ├── run-fortran-ex.sh │ ├── run-fortran-ex.sh.in │ ├── rwdset_fortran2003.f90 │ ├── selectele.f90 │ ├── testh5fc.sh │ └── testh5fc.sh.in ├── robodoc.rc ├── src │ ├── .deps │ │ ├── H5Af.Plo │ │ ├── H5Df.Plo │ │ ├── H5Ef.Plo │ │ ├── H5FDmpiof.Plo │ │ ├── H5Ff.Plo │ │ ├── H5Gf.Plo │ │ ├── H5If.Plo │ │ ├── H5Lf.Plo │ │ ├── H5Of.Plo │ │ ├── H5Pf.Plo │ │ ├── H5Rf.Plo │ │ ├── H5Sf.Plo │ │ ├── H5Tf.Plo │ │ ├── H5Zf.Plo │ │ ├── H5_f.Plo │ │ ├── H5f90kit.Plo │ │ └── H5match_types.Po │ ├── CMakeLists.txt │ ├── H5Af.c │ ├── H5Aff.f90 │ ├── H5Aff_F03.f90 │ ├── H5Aff_F90.f90 │ ├── H5Df.c │ ├── H5Dff.f90 │ ├── H5Dff_F03.f90 │ ├── H5Dff_F90.f90 │ ├── H5Ef.c │ ├── H5Eff.f90 │ ├── H5Eff_F03.f90 │ ├── H5Eff_F90.f90 │ ├── H5FDmpiof.c │ ├── H5FDmpioff.f90 │ ├── H5Ff.c │ ├── H5Fff.f90 │ ├── H5Fff_F03.f90 │ ├── H5Fff_F90.f90 │ ├── H5Gf.c │ ├── H5Gff.f90 │ ├── H5If.c │ ├── H5Iff.f90 │ ├── H5Lf.c │ ├── H5Lff.f90 │ ├── H5Lff_F03.f90 │ ├── H5Lff_F90.f90 │ ├── H5Of.c │ ├── H5Off.f90 │ ├── H5Off_F03.f90 │ ├── H5Off_F90.f90 │ ├── H5Pf.c │ ├── H5Pff.f90 │ ├── H5Pff_F03.f90 │ ├── H5Pff_F90.f90 │ ├── H5Rf.c │ ├── H5Rff.f90 │ ├── H5Rff_F03.f90 │ ├── H5Rff_F90.f90 │ ├── H5Sf.c │ ├── H5Sff.f90 │ ├── H5Tf.c │ ├── H5Tff.f90 │ ├── H5Tff_F03.f90 │ ├── H5Tff_F90.f90 │ ├── H5Zf.c │ ├── H5Zff.f90 │ ├── H5_DBLE_InterfaceExclude.f90 │ ├── H5_DBLE_InterfaceInclude.f90 │ ├── H5_f.c │ ├── H5_ff.f90 │ ├── H5_ff_F03.f90 │ ├── H5_ff_F90.f90 │ ├── H5f90.h │ ├── H5f90global.f90 │ ├── H5f90i.h │ ├── H5f90kit.c │ ├── H5f90proto.h │ ├── H5match_types.c │ ├── H5test_kind.f90 │ ├── H5test_kind_SIZEOF.f90 │ ├── H5test_kind_STORAGE_SIZE.f90 │ ├── HDF5.f90 │ ├── HDF5mpio.f90 │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── README │ ├── h5fc │ ├── h5fc.in │ └── hdf5_fortrandll.def.in ├── test │ ├── .deps │ │ └── t.Plo │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── fflush1.f90 │ ├── fflush2.f90 │ ├── fortranlib_test.f90 │ ├── fortranlib_test_1_8.f90 │ ├── fortranlib_test_F03.f90 │ ├── t.c │ ├── t.h │ ├── tH5A.f90 │ ├── tH5A_1_8.f90 │ ├── tH5D.f90 │ ├── tH5E.f90 │ ├── tH5E_F03.f90 │ ├── tH5F.f90 │ ├── tH5F_F03.f90 │ ├── tH5G.f90 │ ├── tH5G_1_8.f90 │ ├── tH5I.f90 │ ├── tH5L_F03.f90 │ ├── tH5MISC_1_8.f90 │ ├── tH5O.f90 │ ├── tH5O_F03.f90 │ ├── tH5P.f90 │ ├── tH5P_F03.f90 │ ├── tH5R.f90 │ ├── tH5S.f90 │ ├── tH5Sselect.f90 │ ├── tH5T.f90 │ ├── tH5T_F03.f90 │ ├── tH5VL.f90 │ ├── tH5Z.f90 │ ├── tHDF5.f90 │ ├── tHDF5_1_8.f90 │ ├── tHDF5_F03.f90 │ ├── tf.f90 │ ├── tf_F03.f90 │ ├── tf_F08.f90 │ └── tf_F90.f90 └── testpar │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── hyper.f90 │ ├── mdset.f90 │ └── ptest.f90 ├── hl ├── CMakeLists.txt ├── COPYING ├── Makefile ├── Makefile.am ├── Makefile.in ├── c++ │ ├── CMakeLists.txt │ ├── COPYING │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── examples │ │ ├── CMakeLists.txt │ │ ├── CMakeTests.cmake │ │ ├── Makefile │ │ ├── Makefile.am │ │ ├── Makefile.in │ │ ├── ptExampleFL.cpp │ │ ├── run-hlc++-ex.sh │ │ └── run-hlc++-ex.sh.in │ ├── src │ │ ├── .deps │ │ │ └── H5PacketTable.Plo │ │ ├── CMakeLists.txt │ │ ├── H5PacketTable.cpp │ │ ├── H5PacketTable.h │ │ ├── Makefile │ │ ├── Makefile.am │ │ └── Makefile.in │ └── test │ │ ├── .deps │ │ └── ptableTest.Po │ │ ├── CMakeLists.txt │ │ ├── CMakeTests.cmake │ │ ├── Makefile │ │ ├── Makefile.am │ │ ├── Makefile.in │ │ ├── ptableTest.cpp │ │ └── ptableTest.h ├── examples │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── ex_ds1.c │ ├── ex_image1.c │ ├── ex_image2.c │ ├── ex_lite1.c │ ├── ex_lite2.c │ ├── ex_lite3.c │ ├── ex_table_01.c │ ├── ex_table_02.c │ ├── ex_table_03.c │ ├── ex_table_04.c │ ├── ex_table_05.c │ ├── ex_table_06.c │ ├── ex_table_07.c │ ├── ex_table_08.c │ ├── ex_table_09.c │ ├── ex_table_10.c │ ├── ex_table_11.c │ ├── ex_table_12.c │ ├── image24pixel.txt │ ├── image8.txt │ ├── pal_rgb.h │ ├── ptExampleFL.c │ ├── run-hl-ex.sh │ ├── run-hlc-ex.sh │ └── run-hlc-ex.sh.in ├── fortran │ ├── CMakeLists.txt │ ├── COPYING │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── examples │ │ ├── CMakeLists.txt │ │ ├── CMakeTests.cmake │ │ ├── Makefile │ │ ├── Makefile.am │ │ ├── Makefile.in │ │ ├── ex_ds1.f90 │ │ ├── exlite.f90 │ │ ├── run-hlfortran-ex.sh │ │ └── run-hlfortran-ex.sh.in │ ├── src │ │ ├── .deps │ │ │ ├── H5DSfc.Plo │ │ │ ├── H5IMcc.Plo │ │ │ ├── H5IMfc.Plo │ │ │ ├── H5LTfc.Plo │ │ │ └── H5TBfc.Plo │ │ ├── CMakeLists.txt │ │ ├── H5DSfc.c │ │ ├── H5DSff.f90 │ │ ├── H5IMcc.c │ │ ├── H5IMcc.h │ │ ├── H5IMfc.c │ │ ├── H5IMff.f90 │ │ ├── H5LTf90proto.h │ │ ├── H5LTfc.c │ │ ├── H5LTff.f90 │ │ ├── H5TBfc.c │ │ ├── H5TBff.f90 │ │ ├── Makefile │ │ ├── Makefile.am │ │ └── Makefile.in │ └── test │ │ ├── CMakeLists.txt │ │ ├── CMakeTests.cmake │ │ ├── Makefile │ │ ├── Makefile.am │ │ ├── Makefile.in │ │ ├── tstds.f90 │ │ ├── tstimage.f90 │ │ ├── tstlite.f90 │ │ └── tsttable.f90 ├── src │ ├── .deps │ │ ├── H5DO.Plo │ │ ├── H5DS.Plo │ │ ├── H5IM.Plo │ │ ├── H5LT.Plo │ │ ├── H5LTanalyze.Plo │ │ ├── H5LTparse.Plo │ │ ├── H5PT.Plo │ │ └── H5TB.Plo │ ├── CMakeLists.txt │ ├── COPYING │ ├── H5DO.c │ ├── H5DOpublic.h │ ├── H5DS.c │ ├── H5DSprivate.h │ ├── H5DSpublic.h │ ├── H5HLprivate2.h │ ├── H5IM.c │ ├── H5IMprivate.h │ ├── H5IMpublic.h │ ├── H5LT.c │ ├── H5LTanalyze.c │ ├── H5LTanalyze.l │ ├── H5LTparse.c │ ├── H5LTparse.h │ ├── H5LTparse.y │ ├── H5LTprivate.h │ ├── H5LTpublic.h │ ├── H5PT.c │ ├── H5PTprivate.h │ ├── H5PTpublic.h │ ├── H5TB.c │ ├── H5TBprivate.h │ ├── H5TBpublic.h │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ └── hdf5_hl.h ├── test │ ├── .deps │ │ ├── gen_test_ds.Po │ │ ├── test_ds.Po │ │ ├── test_dset_opt.Po │ │ ├── test_file_image.Po │ │ ├── test_image.Po │ │ ├── test_lite.Po │ │ ├── test_packet.Po │ │ └── test_table.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── COPYING │ ├── H5srcdir_str.h │ ├── H5srcdir_str.h.in │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── dectris_hl_perf.c │ ├── dsdata.txt │ ├── dslat.txt │ ├── dslon.txt │ ├── dtype_file.txt │ ├── dtype_file_readable.txt │ ├── earth.pal │ ├── gen_test_ds.c │ ├── h5hltest.h │ ├── image24pixel.txt │ ├── image24plane.txt │ ├── image8.txt │ ├── pal_rgb.h │ ├── sepia.pal │ ├── test_ds.c │ ├── test_ds_be.h5 │ ├── test_ds_le.h5 │ ├── test_dset_opt.c │ ├── test_file_image.c │ ├── test_image.c │ ├── test_lite.c │ ├── test_packet.c │ ├── test_table.c │ ├── test_table_be.h5 │ ├── test_table_cray.h5 │ ├── test_table_le.h5 │ └── usa.wri └── tools │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── COPYING │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ └── gif2h5 │ ├── .deps │ ├── decompress.Po │ ├── gif2hdf.Po │ ├── gif2mem.Po │ ├── gifread.Po │ ├── h52gifgentst.Po │ ├── hdf2gif.Po │ ├── hdfgifwr.Po │ └── writehdf.Po │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── decompress.c │ ├── gif.h │ ├── gif2hdf.c │ ├── gif2mem.c │ ├── gifread.c │ ├── h52gifgentst.c │ ├── h52giftest.sh │ ├── h52giftest.sh.in │ ├── hdf2gif.c │ ├── hdfgifwr.c │ ├── testfiles │ ├── h52giftst.h5 │ └── image1.gif │ └── writehdf.c ├── libtool ├── perform ├── .deps │ ├── chunk.Po │ ├── iopipe.Po │ ├── overhead.Po │ ├── perf.Po │ ├── perf_meta.Po │ ├── pio_engine.Po │ ├── pio_perf.Po │ ├── pio_timer.Po │ ├── sio_engine.Po │ ├── sio_perf.Po │ ├── sio_timer.Po │ └── zip_perf.Po ├── CMakeLists.txt ├── CMakeTests.cmake ├── COPYING ├── Makefile ├── Makefile.am ├── Makefile.in ├── benchpar.c ├── build_h5perf_alone.sh ├── build_h5perf_serial_alone.sh ├── chunk.c ├── gen_report.pl ├── iopipe.c ├── overhead.c ├── perf.c ├── perf_meta.c ├── pio_engine.c ├── pio_perf.c ├── pio_perf.h ├── pio_standalone.c ├── pio_standalone.h ├── pio_timer.c ├── pio_timer.h ├── sio_engine.c ├── sio_perf.c ├── sio_perf.h ├── sio_standalone.c ├── sio_standalone.h ├── sio_timer.c ├── sio_timer.h └── zip_perf.c ├── release_docs ├── COPYING ├── HISTORY-1_0-1_8_0_rc3.txt ├── HISTORY-1_8.txt ├── INSTALL ├── INSTALL_CMake.txt ├── INSTALL_Cygwin.txt ├── INSTALL_VMS.txt ├── INSTALL_Windows.txt ├── INSTALL_parallel ├── RELEASE.txt ├── USING_CMake_Examples.txt ├── USING_HDF5_CMake.txt └── USING_HDF5_VS.txt ├── src ├── .deps │ ├── H5.Plo │ ├── H5A.Plo │ ├── H5AC.Plo │ ├── H5Abtree2.Plo │ ├── H5Adense.Plo │ ├── H5Adeprec.Plo │ ├── H5Aint.Plo │ ├── H5Atest.Plo │ ├── H5B.Plo │ ├── H5B2.Plo │ ├── H5B2cache.Plo │ ├── H5B2dbg.Plo │ ├── H5B2hdr.Plo │ ├── H5B2int.Plo │ ├── H5B2stat.Plo │ ├── H5B2test.Plo │ ├── H5Bcache.Plo │ ├── H5Bdbg.Plo │ ├── H5C.Plo │ ├── H5CS.Plo │ ├── H5D.Plo │ ├── H5Dbtree.Plo │ ├── H5Dchunk.Plo │ ├── H5Dcompact.Plo │ ├── H5Dcontig.Plo │ ├── H5Ddbg.Plo │ ├── H5Ddeprec.Plo │ ├── H5Defl.Plo │ ├── H5Dfill.Plo │ ├── H5Dint.Plo │ ├── H5Dio.Plo │ ├── H5Dlayout.Plo │ ├── H5Dmpio.Plo │ ├── H5Doh.Plo │ ├── H5Dscatgath.Plo │ ├── H5Dselect.Plo │ ├── H5Dtest.Plo │ ├── H5E.Plo │ ├── H5Edeprec.Plo │ ├── H5Eint.Plo │ ├── H5F.Plo │ ├── H5FD.Plo │ ├── H5FDcore.Plo │ ├── H5FDdirect.Plo │ ├── H5FDfamily.Plo │ ├── H5FDint.Plo │ ├── H5FDlog.Plo │ ├── H5FDmpi.Plo │ ├── H5FDmpio.Plo │ ├── H5FDmulti.Plo │ ├── H5FDsec2.Plo │ ├── H5FDspace.Plo │ ├── H5FDstdio.Plo │ ├── H5FL.Plo │ ├── H5FO.Plo │ ├── H5FS.Plo │ ├── H5FScache.Plo │ ├── H5FSdbg.Plo │ ├── H5FSsection.Plo │ ├── H5FSstat.Plo │ ├── H5FStest.Plo │ ├── H5Faccum.Plo │ ├── H5Fcwfs.Plo │ ├── H5Fdbg.Plo │ ├── H5Fefc.Plo │ ├── H5Ffake.Plo │ ├── H5Fint.Plo │ ├── H5Fio.Plo │ ├── H5Fmount.Plo │ ├── H5Fmpi.Plo │ ├── H5Fquery.Plo │ ├── H5Fsfile.Plo │ ├── H5Fsuper.Plo │ ├── H5Fsuper_cache.Plo │ ├── H5Ftest.Plo │ ├── H5G.Plo │ ├── H5Gbtree2.Plo │ ├── H5Gcache.Plo │ ├── H5Gcompact.Plo │ ├── H5Gdense.Plo │ ├── H5Gdeprec.Plo │ ├── H5Gent.Plo │ ├── H5Gint.Plo │ ├── H5Glink.Plo │ ├── H5Gloc.Plo │ ├── H5Gname.Plo │ ├── H5Gnode.Plo │ ├── H5Gobj.Plo │ ├── H5Goh.Plo │ ├── H5Groot.Plo │ ├── H5Gstab.Plo │ ├── H5Gtest.Plo │ ├── H5Gtraverse.Plo │ ├── H5HF.Plo │ ├── H5HFbtree2.Plo │ ├── H5HFcache.Plo │ ├── H5HFdbg.Plo │ ├── H5HFdblock.Plo │ ├── H5HFdtable.Plo │ ├── H5HFhdr.Plo │ ├── H5HFhuge.Plo │ ├── H5HFiblock.Plo │ ├── H5HFiter.Plo │ ├── H5HFman.Plo │ ├── H5HFsection.Plo │ ├── H5HFspace.Plo │ ├── H5HFstat.Plo │ ├── H5HFtest.Plo │ ├── H5HFtiny.Plo │ ├── H5HG.Plo │ ├── H5HGcache.Plo │ ├── H5HGdbg.Plo │ ├── H5HGquery.Plo │ ├── H5HL.Plo │ ├── H5HLcache.Plo │ ├── H5HLdbg.Plo │ ├── H5HLint.Plo │ ├── H5HP.Plo │ ├── H5I.Plo │ ├── H5Itest.Plo │ ├── H5L.Plo │ ├── H5Lexternal.Plo │ ├── H5MF.Plo │ ├── H5MFaggr.Plo │ ├── H5MFdbg.Plo │ ├── H5MFsection.Plo │ ├── H5MM.Plo │ ├── H5MP.Plo │ ├── H5MPtest.Plo │ ├── H5O.Plo │ ├── H5Oainfo.Plo │ ├── H5Oalloc.Plo │ ├── H5Oattr.Plo │ ├── H5Oattribute.Plo │ ├── H5Obogus.Plo │ ├── H5Obtreek.Plo │ ├── H5Ocache.Plo │ ├── H5Ochunk.Plo │ ├── H5Ocont.Plo │ ├── H5Ocopy.Plo │ ├── H5Odbg.Plo │ ├── H5Odrvinfo.Plo │ ├── H5Odtype.Plo │ ├── H5Oefl.Plo │ ├── H5Ofill.Plo │ ├── H5Oginfo.Plo │ ├── H5Olayout.Plo │ ├── H5Olinfo.Plo │ ├── H5Olink.Plo │ ├── H5Omessage.Plo │ ├── H5Omtime.Plo │ ├── H5Oname.Plo │ ├── H5Onull.Plo │ ├── H5Opline.Plo │ ├── H5Orefcount.Plo │ ├── H5Osdspace.Plo │ ├── H5Oshared.Plo │ ├── H5Oshmesg.Plo │ ├── H5Ostab.Plo │ ├── H5Otest.Plo │ ├── H5Ounknown.Plo │ ├── H5P.Plo │ ├── H5PL.Plo │ ├── H5Pacpl.Plo │ ├── H5Pdapl.Plo │ ├── H5Pdcpl.Plo │ ├── H5Pdeprec.Plo │ ├── H5Pdxpl.Plo │ ├── H5Pfapl.Plo │ ├── H5Pfcpl.Plo │ ├── H5Pfmpl.Plo │ ├── H5Pgcpl.Plo │ ├── H5Pint.Plo │ ├── H5Plapl.Plo │ ├── H5Plcpl.Plo │ ├── H5Pocpl.Plo │ ├── H5Pocpypl.Plo │ ├── H5Pstrcpl.Plo │ ├── H5Ptest.Plo │ ├── H5R.Plo │ ├── H5RC.Plo │ ├── H5RS.Plo │ ├── H5Rdeprec.Plo │ ├── H5S.Plo │ ├── H5SL.Plo │ ├── H5SM.Plo │ ├── H5SMbtree2.Plo │ ├── H5SMcache.Plo │ ├── H5SMmessage.Plo │ ├── H5SMtest.Plo │ ├── H5ST.Plo │ ├── H5Sall.Plo │ ├── H5Sdbg.Plo │ ├── H5Shyper.Plo │ ├── H5Smpio.Plo │ ├── H5Snone.Plo │ ├── H5Spoint.Plo │ ├── H5Sselect.Plo │ ├── H5Stest.Plo │ ├── H5T.Plo │ ├── H5TS.Plo │ ├── H5Tarray.Plo │ ├── H5Tbit.Plo │ ├── H5Tcommit.Plo │ ├── H5Tcompound.Plo │ ├── H5Tconv.Plo │ ├── H5Tcset.Plo │ ├── H5Tdbg.Plo │ ├── H5Tdeprec.Plo │ ├── H5Tenum.Plo │ ├── H5Tfields.Plo │ ├── H5Tfixed.Plo │ ├── H5Tfloat.Plo │ ├── H5Tinit.Plo │ ├── H5Tnative.Plo │ ├── H5Toffset.Plo │ ├── H5Toh.Plo │ ├── H5Topaque.Plo │ ├── H5Torder.Plo │ ├── H5Tpad.Plo │ ├── H5Tprecis.Plo │ ├── H5Tstrpad.Plo │ ├── H5Tvisit.Plo │ ├── H5Tvlen.Plo │ ├── H5VM.Plo │ ├── H5WB.Plo │ ├── H5Z.Plo │ ├── H5Zdeflate.Plo │ ├── H5Zfletcher32.Plo │ ├── H5Znbit.Plo │ ├── H5Zscaleoffset.Plo │ ├── H5Zshuffle.Plo │ ├── H5Zszip.Plo │ ├── H5Ztrans.Plo │ ├── H5checksum.Plo │ ├── H5dbg.Plo │ ├── H5detect.Po │ ├── H5lib_settings.Plo │ ├── H5make_libsettings.Po │ ├── H5system.Plo │ ├── H5timer.Plo │ └── H5trace.Plo ├── CMakeLists.txt ├── COPYING ├── H5.c ├── H5A.c ├── H5AC.c ├── H5ACpkg.h ├── H5ACprivate.h ├── H5ACpublic.h ├── H5Abtree2.c ├── H5Adense.c ├── H5Adeprec.c ├── H5Aint.c ├── H5Apkg.h ├── H5Aprivate.h ├── H5Apublic.h ├── H5Atest.c ├── H5B.c ├── H5B2.c ├── H5B2cache.c ├── H5B2dbg.c ├── H5B2hdr.c ├── H5B2int.c ├── H5B2pkg.h ├── H5B2private.h ├── H5B2public.h ├── H5B2stat.c ├── H5B2test.c ├── H5Bcache.c ├── H5Bdbg.c ├── H5Bpkg.h ├── H5Bprivate.h ├── H5Bpublic.h ├── H5C.c ├── H5CS.c ├── H5CSprivate.h ├── H5Cpkg.h ├── H5Cprivate.h ├── H5Cpublic.h ├── H5D.c ├── H5Dbtree.c ├── H5Dchunk.c ├── H5Dcompact.c ├── H5Dcontig.c ├── H5Ddbg.c ├── H5Ddeprec.c ├── H5Defl.c ├── H5Dfill.c ├── H5Dint.c ├── H5Dio.c ├── H5Dlayout.c ├── H5Dmpio.c ├── H5Doh.c ├── H5Dpkg.h ├── H5Dprivate.h ├── H5Dpublic.h ├── H5Dscatgath.c ├── H5Dselect.c ├── H5Dtest.c ├── H5E.c ├── H5Edefin.h ├── H5Edeprec.c ├── H5Einit.h ├── H5Eint.c ├── H5Epkg.h ├── H5Eprivate.h ├── H5Epubgen.h ├── H5Epublic.h ├── H5Eterm.h ├── H5F.c ├── H5FD.c ├── H5FDcore.c ├── H5FDcore.h ├── H5FDdirect.c ├── H5FDdirect.h ├── H5FDfamily.c ├── H5FDfamily.h ├── H5FDint.c ├── H5FDlog.c ├── H5FDlog.h ├── H5FDmpi.c ├── H5FDmpi.h ├── H5FDmpio.c ├── H5FDmpio.h ├── H5FDmulti.c ├── H5FDmulti.h ├── H5FDpkg.h ├── H5FDprivate.h ├── H5FDpublic.h ├── H5FDsec2.c ├── H5FDsec2.h ├── H5FDspace.c ├── H5FDstdio.c ├── H5FDstdio.h ├── H5FDwindows.c ├── H5FDwindows.h ├── H5FL.c ├── H5FLprivate.h ├── H5FO.c ├── H5FOprivate.h ├── H5FS.c ├── H5FScache.c ├── H5FSdbg.c ├── H5FSpkg.h ├── H5FSprivate.h ├── H5FSpublic.h ├── H5FSsection.c ├── H5FSstat.c ├── H5FStest.c ├── H5Faccum.c ├── H5Fcwfs.c ├── H5Fdbg.c ├── H5Fefc.c ├── H5Ffake.c ├── H5Fint.c ├── H5Fio.c ├── H5Fmount.c ├── H5Fmpi.c ├── H5Fpkg.h ├── H5Fprivate.h ├── H5Fpublic.h ├── H5Fquery.c ├── H5Fsfile.c ├── H5Fsuper.c ├── H5Fsuper_cache.c ├── H5Ftest.c ├── H5G.c ├── H5Gbtree2.c ├── H5Gcache.c ├── H5Gcompact.c ├── H5Gdense.c ├── H5Gdeprec.c ├── H5Gent.c ├── H5Gint.c ├── H5Glink.c ├── H5Gloc.c ├── H5Gname.c ├── H5Gnode.c ├── H5Gobj.c ├── H5Goh.c ├── H5Gpkg.h ├── H5Gprivate.h ├── H5Gpublic.h ├── H5Groot.c ├── H5Gstab.c ├── H5Gtest.c ├── H5Gtraverse.c ├── H5HF.c ├── H5HFbtree2.c ├── H5HFcache.c ├── H5HFdbg.c ├── H5HFdblock.c ├── H5HFdtable.c ├── H5HFhdr.c ├── H5HFhuge.c ├── H5HFiblock.c ├── H5HFiter.c ├── H5HFman.c ├── H5HFpkg.h ├── H5HFprivate.h ├── H5HFpublic.h ├── H5HFsection.c ├── H5HFspace.c ├── H5HFstat.c ├── H5HFtest.c ├── H5HFtiny.c ├── H5HG.c ├── H5HGcache.c ├── H5HGdbg.c ├── H5HGpkg.h ├── H5HGprivate.h ├── H5HGpublic.h ├── H5HGquery.c ├── H5HL.c ├── H5HLcache.c ├── H5HLdbg.c ├── H5HLint.c ├── H5HLpkg.h ├── H5HLprivate.h ├── H5HLpublic.h ├── H5HP.c ├── H5HPprivate.h ├── H5I.c ├── H5Ipkg.h ├── H5Iprivate.h ├── H5Ipublic.h ├── H5Itest.c ├── H5L.c ├── H5Lexternal.c ├── H5Lpkg.h ├── H5Lprivate.h ├── H5Lpublic.h ├── H5MF.c ├── H5MFaggr.c ├── H5MFdbg.c ├── H5MFpkg.h ├── H5MFprivate.h ├── H5MFsection.c ├── H5MM.c ├── H5MMprivate.h ├── H5MMpublic.h ├── H5MP.c ├── H5MPpkg.h ├── H5MPprivate.h ├── H5MPtest.c ├── H5O.c ├── H5Oainfo.c ├── H5Oalloc.c ├── H5Oattr.c ├── H5Oattribute.c ├── H5Obogus.c ├── H5Obtreek.c ├── H5Ocache.c ├── H5Ochunk.c ├── H5Ocont.c ├── H5Ocopy.c ├── H5Odbg.c ├── H5Odrvinfo.c ├── H5Odtype.c ├── H5Oefl.c ├── H5Ofill.c ├── H5Oginfo.c ├── H5Olayout.c ├── H5Olinfo.c ├── H5Olink.c ├── H5Omessage.c ├── H5Omtime.c ├── H5Oname.c ├── H5Onull.c ├── H5Opkg.h ├── H5Opline.c ├── H5Oprivate.h ├── H5Opublic.h ├── H5Orefcount.c ├── H5Osdspace.c ├── H5Oshared.c ├── H5Oshared.h ├── H5Oshmesg.c ├── H5Ostab.c ├── H5Otest.c ├── H5Ounknown.c ├── H5P.c ├── H5PL.c ├── H5PLextern.h ├── H5PLprivate.h ├── H5Pacpl.c ├── H5Pdapl.c ├── H5Pdcpl.c ├── H5Pdeprec.c ├── H5Pdxpl.c ├── H5Pfapl.c ├── H5Pfcpl.c ├── H5Pfmpl.c ├── H5Pgcpl.c ├── H5Pint.c ├── H5Plapl.c ├── H5Plcpl.c ├── H5Pocpl.c ├── H5Pocpypl.c ├── H5Ppkg.h ├── H5Pprivate.h ├── H5Ppublic.h ├── H5Pstrcpl.c ├── H5Ptest.c ├── H5R.c ├── H5RC.c ├── H5RCprivate.h ├── H5RS.c ├── H5RSprivate.h ├── H5Rdeprec.c ├── H5Rpkg.h ├── H5Rprivate.h ├── H5Rpublic.h ├── H5S.c ├── H5SL.c ├── H5SLprivate.h ├── H5SM.c ├── H5SMbtree2.c ├── H5SMcache.c ├── H5SMmessage.c ├── H5SMpkg.h ├── H5SMprivate.h ├── H5SMtest.c ├── H5ST.c ├── H5STprivate.h ├── H5Sall.c ├── H5Sdbg.c ├── H5Shyper.c ├── H5Smpio.c ├── H5Snone.c ├── H5Spkg.h ├── H5Spoint.c ├── H5Sprivate.h ├── H5Spublic.h ├── H5Sselect.c ├── H5Stest.c ├── H5T.c ├── H5TS.c ├── H5TSprivate.h ├── H5Tarray.c ├── H5Tbit.c ├── H5Tcommit.c ├── H5Tcompound.c ├── H5Tconv.c ├── H5Tcset.c ├── H5Tdbg.c ├── H5Tdeprec.c ├── H5Tenum.c ├── H5Tfields.c ├── H5Tfixed.c ├── H5Tfloat.c ├── H5Tinit.c ├── H5Tnative.c ├── H5Toffset.c ├── H5Toh.c ├── H5Topaque.c ├── H5Torder.c ├── H5Tpad.c ├── H5Tpkg.h ├── H5Tprecis.c ├── H5Tprivate.h ├── H5Tpublic.h ├── H5Tstrpad.c ├── H5Tvisit.c ├── H5Tvlen.c ├── H5VM.c ├── H5VMprivate.h ├── H5WB.c ├── H5WBprivate.h ├── H5Z.c ├── H5Zdeflate.c ├── H5Zfletcher32.c ├── H5Znbit.c ├── H5Zpkg.h ├── H5Zprivate.h ├── H5Zpublic.h ├── H5Zscaleoffset.c ├── H5Zshuffle.c ├── H5Zszip.c ├── H5Ztrans.c ├── H5api_adpt.h ├── H5checksum.c ├── H5config.h ├── H5config.h.in ├── H5dbg.c ├── H5detect.c.BACKUP ├── H5err.txt ├── H5lib_settings.c ├── H5make_libsettings.c.BACKUP ├── H5overflow.h ├── H5overflow.txt ├── H5private.h ├── H5pubconf.h ├── H5public.h ├── H5system.c ├── H5timer.c ├── H5trace.c ├── H5vers.txt ├── H5version.h ├── H5win32defs.h ├── Makefile ├── Makefile.am ├── Makefile.in ├── hdf5.h ├── libhdf5.settings ├── libhdf5.settings.in └── stamp-h1 ├── test ├── .deps │ ├── accum.Po │ ├── app_ref.Po │ ├── big.Po │ ├── bittests.Po │ ├── btree2.Po │ ├── cache.Po │ ├── cache_api.Po │ ├── cache_common.Plo │ ├── cmpd_dset.Po │ ├── cross_read.Po │ ├── dangle.Po │ ├── dsets.Po │ ├── dt_arith.Po │ ├── dtransform.Po │ ├── dtypes.Po │ ├── dynlib1.Plo │ ├── dynlib2.Plo │ ├── dynlib3.Plo │ ├── efc.Po │ ├── enum.Po │ ├── err_compat.Po │ ├── error_test.Po │ ├── extend.Po │ ├── external.Po │ ├── fheap.Po │ ├── file_image.Po │ ├── fillval.Po │ ├── filter_fail.Po │ ├── flush1.Po │ ├── flush2.Po │ ├── freespace.Po │ ├── gen_bad_ohdr.Po │ ├── gen_bogus.Po │ ├── gen_cross.Po │ ├── gen_deflate.Po │ ├── gen_file_image.Po │ ├── gen_filters.Po │ ├── gen_idx.Po │ ├── gen_new_array.Po │ ├── gen_new_fill.Po │ ├── gen_new_group.Po │ ├── gen_new_mtime.Po │ ├── gen_new_super.Po │ ├── gen_noencoder.Po │ ├── gen_nullspace.Po │ ├── gen_sizes_lheap.Po │ ├── gen_udlinks.Po │ ├── getname.Po │ ├── gheap.Po │ ├── h5test.Plo │ ├── hyperslab.Po │ ├── istore.Po │ ├── lheap.Po │ ├── links.Po │ ├── links_env.Po │ ├── mf.Po │ ├── mount.Po │ ├── mtime.Po │ ├── ntypes.Po │ ├── objcopy.Po │ ├── ohdr.Po │ ├── plugin.Po │ ├── pool.Po │ ├── reserved.Po │ ├── set_extent.Po │ ├── space_overflow.Po │ ├── stab.Po │ ├── tarray.Po │ ├── tattr.Po │ ├── tcheck_version.Po │ ├── tchecksum.Po │ ├── tconfig.Po │ ├── tcoords.Po │ ├── testframe.Plo │ ├── testhdf5.Po │ ├── testmeta.Po │ ├── tfile.Po │ ├── tgenprop.Po │ ├── th5o.Po │ ├── th5s.Po │ ├── theap.Po │ ├── tid.Po │ ├── titerate.Po │ ├── tmeta.Po │ ├── tmisc.Po │ ├── trefer.Po │ ├── trefstr.Po │ ├── tselect.Po │ ├── tskiplist.Po │ ├── tsohm.Po │ ├── ttime.Po │ ├── ttsafe.Po │ ├── ttsafe_acreate.Po │ ├── ttsafe_cancel.Po │ ├── ttsafe_dcreate.Po │ ├── ttsafe_error.Po │ ├── ttst.Po │ ├── tunicode.Po │ ├── tvlstr.Po │ ├── tvltypes.Po │ ├── unlink.Po │ ├── unregister.Po │ └── vfd.Po ├── CMakeLists.txt ├── CMakeTests.cmake ├── COPYING ├── H5srcdir.h ├── H5srcdir_str.h ├── H5srcdir_str.h.in ├── Makefile ├── Makefile.am ├── Makefile.in ├── accum.c ├── app_ref.c ├── bad_compound.h5 ├── be_data.h5 ├── be_extlink1.h5 ├── be_extlink2.h5 ├── big.c ├── bittests.c ├── btree2.c ├── cache.c ├── cache_api.c ├── cache_common.c ├── cache_common.h ├── cmpd_dset.c ├── corrupt_stab_msg.h5 ├── cross_read.c ├── dangle.c ├── deflate.h5 ├── dsets.c ├── dt_arith.c ├── dtransform.c ├── dtypes.c ├── dynlib1.c ├── dynlib2.c ├── dynlib3.c ├── efc.c ├── enum.c ├── err_compat.c ├── error_test.c ├── extend.c ├── external.c ├── family_v16_00000.h5 ├── family_v16_00001.h5 ├── family_v16_00002.h5 ├── family_v16_00003.h5 ├── fheap.c ├── file_image.c ├── file_image_core_test.h5 ├── fill_old.h5 ├── fillval.c ├── filter_error.h5 ├── filter_fail.c ├── fixed_idx.h5 ├── flush1.c ├── flush2.c ├── freespace.c ├── gen_bad_compound.c ├── gen_bad_ohdr.c ├── gen_bogus.c ├── gen_cross.c ├── gen_deflate.c ├── gen_file_image.c ├── gen_filters.c ├── gen_idx.c ├── gen_mergemsg.c ├── gen_new_array.c ├── gen_new_fill.c ├── gen_new_group.c ├── gen_new_mtime.c ├── gen_new_super.c ├── gen_noencoder.c ├── gen_nullspace.c ├── gen_old_array.c ├── gen_old_group.c ├── gen_old_layout.c ├── gen_old_mtime.c ├── gen_sizes_lheap.c ├── gen_udlinks.c ├── getname.c ├── gheap.c ├── group_old.h5 ├── h5test.c ├── h5test.h ├── hyperslab.c ├── istore.c ├── le_data.h5 ├── le_extlink1.h5 ├── le_extlink2.h5 ├── lheap.c ├── links.c ├── links_env.c ├── mergemsg.h5 ├── mf.c ├── mount.c ├── mtime.c ├── multi_file_v16-r.h5 ├── multi_file_v16-s.h5 ├── noencoder.h5 ├── ntypes.c ├── objcopy.c ├── ohdr.c ├── plugin.c ├── pool.c ├── reserved.c ├── set_extent.c ├── space_overflow.c ├── specmetaread.h5 ├── stab.c ├── tarray.c ├── tarrold.h5 ├── tattr.c ├── tbad_msg_count.h5 ├── tbogus.h5 ├── tcheck_version.c ├── tchecksum.c ├── tconfig.c ├── tcoords.c ├── test_filters_be.h5 ├── test_filters_le.h5 ├── test_plugin.sh ├── test_plugin.sh.in ├── testcheck_version.sh ├── testcheck_version.sh.in ├── testerror.sh ├── testerror.sh.in ├── testfiles │ ├── err_compat_1 │ ├── err_compat_2 │ ├── error_test_1 │ ├── error_test_2 │ └── links_env.out ├── testframe.c ├── testhdf5.c ├── testhdf5.h ├── testlibinfo.sh ├── testlibinfo.sh.in ├── testlinks_env.sh ├── testlinks_env.sh.in ├── testmeta.c ├── tfile.c ├── tgenprop.c ├── th5o.c ├── th5s.c ├── th5s.h5 ├── theap.c ├── tid.c ├── titerate.c ├── tlayouto.h5 ├── tmeta.c ├── tmisc.c ├── tmtimen.h5 ├── tmtimeo.h5 ├── trefer.c ├── trefstr.c ├── tselect.c ├── tsizeslheap.h5 ├── tskiplist.c ├── tsohm.c ├── ttime.c ├── ttsafe.c ├── ttsafe.h ├── ttsafe_acreate.c ├── ttsafe_cancel.c ├── ttsafe_dcreate.c ├── ttsafe_error.c ├── ttst.c ├── tunicode.c ├── tvlstr.c ├── tvltypes.c ├── unlink.c ├── unregister.c └── vfd.c ├── testpar ├── .deps │ ├── t_cache.Po │ ├── t_chunk_alloc.Po │ ├── t_coll_chunk.Po │ ├── t_dset.Po │ ├── t_file.Po │ ├── t_file_image.Po │ ├── t_filter_read.Po │ ├── t_mdset.Po │ ├── t_mpi.Po │ ├── t_pflush1.Po │ ├── t_pflush2.Po │ ├── t_ph5basic.Po │ ├── t_shapesame.Po │ ├── t_span_tree.Po │ └── testphdf5.Po ├── CMakeLists.txt ├── CMakeTests.cmake ├── COPYING ├── Makefile ├── Makefile.am ├── Makefile.in ├── t_cache.c ├── t_chunk_alloc.c ├── t_coll_chunk.c ├── t_dset.c ├── t_file.c ├── t_file_image.c ├── t_filter_read.c ├── t_mdset.c ├── t_mpi.c ├── t_pflush1.c ├── t_pflush2.c ├── t_ph5basic.c ├── t_shapesame.c ├── t_span_tree.c ├── testpar.h ├── testphdf5.c └── testphdf5.h ├── tools ├── CMakeLists.txt ├── COPYING ├── Makefile ├── Makefile.am ├── Makefile.in ├── h5copy │ ├── .deps │ │ ├── h5copy.Po │ │ └── h5copygentest.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5copy.c │ ├── h5copygentest.c │ ├── testfiles │ │ ├── h5copy_extlinks_src.h5 │ │ ├── h5copy_extlinks_src.out.ls │ │ ├── h5copy_extlinks_trg.h5 │ │ ├── h5copy_misc1.out │ │ ├── h5copy_ref.h5 │ │ ├── h5copy_ref.out.ls │ │ ├── h5copytst.h5 │ │ └── h5copytst.out.ls │ ├── testh5copy.sh │ └── testh5copy.sh.in ├── h5diff │ ├── .deps │ │ ├── h5diff_common.Po │ │ ├── h5diff_main.Po │ │ ├── h5diffgentest.Po │ │ └── ph5diff_main.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5diff_common.c │ ├── h5diff_common.h │ ├── h5diff_main.c │ ├── h5diffgentest.c │ ├── ph5diff_main.c │ ├── testfiles │ │ ├── compounds_array_vlen1.h5 │ │ ├── compounds_array_vlen2.h5 │ │ ├── h5diff_10.txt │ │ ├── h5diff_100.txt │ │ ├── h5diff_101.txt │ │ ├── h5diff_101w.txt │ │ ├── h5diff_102.txt │ │ ├── h5diff_102w.txt │ │ ├── h5diff_103.txt │ │ ├── h5diff_103w.txt │ │ ├── h5diff_104.txt │ │ ├── h5diff_104w.txt │ │ ├── h5diff_11.txt │ │ ├── h5diff_12.txt │ │ ├── h5diff_13.txt │ │ ├── h5diff_14.txt │ │ ├── h5diff_15.txt │ │ ├── h5diff_16_1.txt │ │ ├── h5diff_16_2.txt │ │ ├── h5diff_16_3.txt │ │ ├── h5diff_17.txt │ │ ├── h5diff_171.txt │ │ ├── h5diff_172.txt │ │ ├── h5diff_18.txt │ │ ├── h5diff_18_1.txt │ │ ├── h5diff_20.txt │ │ ├── h5diff_200.txt │ │ ├── h5diff_201.txt │ │ ├── h5diff_202.txt │ │ ├── h5diff_203.txt │ │ ├── h5diff_204.txt │ │ ├── h5diff_205.txt │ │ ├── h5diff_206.txt │ │ ├── h5diff_207.txt │ │ ├── h5diff_208.txt │ │ ├── h5diff_21.txt │ │ ├── h5diff_22.txt │ │ ├── h5diff_220.txt │ │ ├── h5diff_221.txt │ │ ├── h5diff_222.txt │ │ ├── h5diff_223.txt │ │ ├── h5diff_224.txt │ │ ├── h5diff_23.txt │ │ ├── h5diff_24.txt │ │ ├── h5diff_25.txt │ │ ├── h5diff_26.txt │ │ ├── h5diff_27.txt │ │ ├── h5diff_28.txt │ │ ├── h5diff_30.txt │ │ ├── h5diff_300.txt │ │ ├── h5diff_400.txt │ │ ├── h5diff_401.txt │ │ ├── h5diff_402.txt │ │ ├── h5diff_403.txt │ │ ├── h5diff_404.txt │ │ ├── h5diff_405.txt │ │ ├── h5diff_406.txt │ │ ├── h5diff_407.txt │ │ ├── h5diff_408.txt │ │ ├── h5diff_409.txt │ │ ├── h5diff_410.txt │ │ ├── h5diff_411.txt │ │ ├── h5diff_412.txt │ │ ├── h5diff_413.txt │ │ ├── h5diff_414.txt │ │ ├── h5diff_415.txt │ │ ├── h5diff_416.txt │ │ ├── h5diff_417.txt │ │ ├── h5diff_418.txt │ │ ├── h5diff_419.txt │ │ ├── h5diff_420.txt │ │ ├── h5diff_421.txt │ │ ├── h5diff_422.txt │ │ ├── h5diff_423.txt │ │ ├── h5diff_424.txt │ │ ├── h5diff_425.txt │ │ ├── h5diff_450.txt │ │ ├── h5diff_451.txt │ │ ├── h5diff_452.txt │ │ ├── h5diff_453.txt │ │ ├── h5diff_454.txt │ │ ├── h5diff_455.txt │ │ ├── h5diff_456.txt │ │ ├── h5diff_457.txt │ │ ├── h5diff_458.txt │ │ ├── h5diff_459.txt │ │ ├── h5diff_465.txt │ │ ├── h5diff_466.txt │ │ ├── h5diff_467.txt │ │ ├── h5diff_468.txt │ │ ├── h5diff_469.txt │ │ ├── h5diff_471.txt │ │ ├── h5diff_472.txt │ │ ├── h5diff_473.txt │ │ ├── h5diff_474.txt │ │ ├── h5diff_475.txt │ │ ├── h5diff_480.txt │ │ ├── h5diff_481.txt │ │ ├── h5diff_482.txt │ │ ├── h5diff_483.txt │ │ ├── h5diff_484.txt │ │ ├── h5diff_485.txt │ │ ├── h5diff_486.txt │ │ ├── h5diff_487.txt │ │ ├── h5diff_50.txt │ │ ├── h5diff_500.txt │ │ ├── h5diff_501.txt │ │ ├── h5diff_502.txt │ │ ├── h5diff_503.txt │ │ ├── h5diff_504.txt │ │ ├── h5diff_505.txt │ │ ├── h5diff_506.txt │ │ ├── h5diff_507.txt │ │ ├── h5diff_508.txt │ │ ├── h5diff_509.txt │ │ ├── h5diff_51.txt │ │ ├── h5diff_510.txt │ │ ├── h5diff_511.txt │ │ ├── h5diff_512.txt │ │ ├── h5diff_513.txt │ │ ├── h5diff_514.txt │ │ ├── h5diff_515.txt │ │ ├── h5diff_516.txt │ │ ├── h5diff_517.txt │ │ ├── h5diff_518.txt │ │ ├── h5diff_52.txt │ │ ├── h5diff_53.txt │ │ ├── h5diff_530.txt │ │ ├── h5diff_54.txt │ │ ├── h5diff_540.txt │ │ ├── h5diff_55.txt │ │ ├── h5diff_56.txt │ │ ├── h5diff_57.txt │ │ ├── h5diff_58.txt │ │ ├── h5diff_59.txt │ │ ├── h5diff_600.txt │ │ ├── h5diff_601.txt │ │ ├── h5diff_603.txt │ │ ├── h5diff_604.txt │ │ ├── h5diff_605.txt │ │ ├── h5diff_606.txt │ │ ├── h5diff_607.txt │ │ ├── h5diff_608.txt │ │ ├── h5diff_609.txt │ │ ├── h5diff_610.txt │ │ ├── h5diff_612.txt │ │ ├── h5diff_613.txt │ │ ├── h5diff_614.txt │ │ ├── h5diff_615.txt │ │ ├── h5diff_616.txt │ │ ├── h5diff_617.txt │ │ ├── h5diff_618.txt │ │ ├── h5diff_619.txt │ │ ├── h5diff_621.txt │ │ ├── h5diff_622.txt │ │ ├── h5diff_623.txt │ │ ├── h5diff_624.txt │ │ ├── h5diff_625.txt │ │ ├── h5diff_626.txt │ │ ├── h5diff_627.txt │ │ ├── h5diff_628.txt │ │ ├── h5diff_629.txt │ │ ├── h5diff_630.txt │ │ ├── h5diff_631.txt │ │ ├── h5diff_640.txt │ │ ├── h5diff_641.txt │ │ ├── h5diff_642.txt │ │ ├── h5diff_643.txt │ │ ├── h5diff_644.txt │ │ ├── h5diff_645.txt │ │ ├── h5diff_646.txt │ │ ├── h5diff_70.txt │ │ ├── h5diff_700.txt │ │ ├── h5diff_701.txt │ │ ├── h5diff_702.txt │ │ ├── h5diff_703.txt │ │ ├── h5diff_704.txt │ │ ├── h5diff_705.txt │ │ ├── h5diff_706.txt │ │ ├── h5diff_707.txt │ │ ├── h5diff_708.txt │ │ ├── h5diff_709.txt │ │ ├── h5diff_710.txt │ │ ├── h5diff_80.txt │ │ ├── h5diff_90.txt │ │ ├── h5diff_attr1.h5 │ │ ├── h5diff_attr2.h5 │ │ ├── h5diff_attr_v_level1.h5 │ │ ├── h5diff_attr_v_level2.h5 │ │ ├── h5diff_basic1.h5 │ │ ├── h5diff_basic2.h5 │ │ ├── h5diff_comp_vl_strs.h5 │ │ ├── h5diff_danglelinks1.h5 │ │ ├── h5diff_danglelinks2.h5 │ │ ├── h5diff_dset1.h5 │ │ ├── h5diff_dset2.h5 │ │ ├── h5diff_dset_zero_dim_size1.h5 │ │ ├── h5diff_dset_zero_dim_size2.h5 │ │ ├── h5diff_dtypes.h5 │ │ ├── h5diff_empty.h5 │ │ ├── h5diff_enum_invalid_values.h5 │ │ ├── h5diff_exclude1-1.h5 │ │ ├── h5diff_exclude1-2.h5 │ │ ├── h5diff_exclude2-1.h5 │ │ ├── h5diff_exclude2-2.h5 │ │ ├── h5diff_exclude3-1.h5 │ │ ├── h5diff_exclude3-2.h5 │ │ ├── h5diff_ext2softlink_src.h5 │ │ ├── h5diff_ext2softlink_trg.h5 │ │ ├── h5diff_extlink_src.h5 │ │ ├── h5diff_extlink_trg.h5 │ │ ├── h5diff_grp_recurse1.h5 │ │ ├── h5diff_grp_recurse2.h5 │ │ ├── h5diff_grp_recurse_ext1.h5 │ │ ├── h5diff_grp_recurse_ext2-1.h5 │ │ ├── h5diff_grp_recurse_ext2-2.h5 │ │ ├── h5diff_grp_recurse_ext2-3.h5 │ │ ├── h5diff_hyper1.h5 │ │ ├── h5diff_hyper2.h5 │ │ ├── h5diff_linked_softlink.h5 │ │ ├── h5diff_links.h5 │ │ ├── h5diff_softlinks.h5 │ │ ├── h5diff_tmp1.txt │ │ ├── h5diff_tmp2.txt │ │ ├── h5diff_types.h5 │ │ ├── non_comparables1.h5 │ │ ├── non_comparables2.h5 │ │ ├── tmpSingleSiteBethe.output.h5 │ │ ├── tmpSingleSiteBethe.reference.h5 │ │ ├── tmptest.he5 │ │ └── tmptest2.he5 │ ├── testh5diff.sh │ ├── testh5diff.sh.in │ ├── testph5diff.sh │ └── testph5diff.sh.in ├── h5dump │ ├── .deps │ │ ├── binread.Po │ │ ├── h5dump.Po │ │ ├── h5dump_ddl.Po │ │ ├── h5dump_xml.Po │ │ └── h5dumpgentest.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── CMakeTestsPBITS.cmake │ ├── CMakeTestsXML.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── binread.c │ ├── errfiles │ │ ├── filter_fail.err │ │ ├── tall-1.err │ │ ├── tall-2A.err │ │ ├── tall-2A0.err │ │ ├── tall-2B.err │ │ ├── tarray1_big.err │ │ ├── tattr-3.err │ │ ├── tattrregR.err │ │ ├── tcomp-3.err │ │ ├── tdataregR.err │ │ ├── tdset-2.err │ │ ├── texceedsubblock.err │ │ ├── texceedsubcount.err │ │ ├── texceedsubstart.err │ │ ├── texceedsubstride.err │ │ ├── textlink.err │ │ ├── textlinkfar.err │ │ ├── textlinksrc.err │ │ ├── tgroup-2.err │ │ ├── tnofilename-with-packed-bits.err │ │ ├── torderlinks1.err │ │ ├── torderlinks2.err │ │ ├── tpbitsCharLengthExceeded.err │ │ ├── tpbitsCharOffsetExceeded.err │ │ ├── tpbitsIncomplete.err │ │ ├── tpbitsIntLengthExceeded.err │ │ ├── tpbitsIntOffsetExceeded.err │ │ ├── tpbitsLengthExceeded.err │ │ ├── tpbitsLengthPositive.err │ │ ├── tpbitsLongLengthExceeded.err │ │ ├── tpbitsLongOffsetExceeded.err │ │ ├── tpbitsMaxExceeded.err │ │ ├── tpbitsOffsetExceeded.err │ │ ├── tpbitsOffsetNegative.err │ │ ├── tperror.err │ │ ├── tqmarkfile.err │ │ └── tslink-D.err │ ├── h5dump.c │ ├── h5dump.h │ ├── h5dump_ddl.c │ ├── h5dump_ddl.h │ ├── h5dump_defines.h │ ├── h5dump_extern.h │ ├── h5dump_xml.c │ ├── h5dump_xml.h │ ├── h5dumpgentest.c │ ├── testh5dump.sh │ ├── testh5dump.sh.in │ ├── testh5dumppbits.sh │ ├── testh5dumppbits.sh.in │ ├── testh5dumpxml.sh │ └── testh5dumpxml.sh.in ├── h5import │ ├── .deps │ │ ├── h5import.Po │ │ └── h5importtest.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5import.c │ ├── h5import.h │ ├── h5importtest.c │ ├── h5importtestutil.sh │ ├── h5importtestutil.sh.in │ └── testfiles │ │ ├── binfp64.conf │ │ ├── binfp64.h5 │ │ ├── binin16.conf │ │ ├── binin16.h5 │ │ ├── binin32.conf │ │ ├── binin32.h5 │ │ ├── binin8.conf │ │ ├── binin8.h5 │ │ ├── binin8w.conf │ │ ├── binin8w.h5 │ │ ├── binuin16.conf │ │ ├── binuin16.h5 │ │ ├── binuin32.conf │ │ ├── binuin32.h5 │ │ ├── dbinfp64.h5.txt │ │ ├── dbinin16.h5.txt │ │ ├── dbinin32.h5.txt │ │ ├── dbinin8.h5.txt │ │ ├── dbinin8w.h5.txt │ │ ├── dbinuin16.h5.txt │ │ ├── dbinuin32.h5.txt │ │ ├── dtxtstr.h5.txt │ │ ├── textpfe.conf │ │ ├── textpfe.h5 │ │ ├── textpfe64.txt │ │ ├── txtfp32.conf │ │ ├── txtfp32.h5 │ │ ├── txtfp32.txt │ │ ├── txtfp64.conf │ │ ├── txtfp64.h5 │ │ ├── txtfp64.txt │ │ ├── txtin16.conf │ │ ├── txtin16.h5 │ │ ├── txtin16.txt │ │ ├── txtin32.conf │ │ ├── txtin32.h5 │ │ ├── txtin32.txt │ │ ├── txtin8.conf │ │ ├── txtin8.h5 │ │ ├── txtin8.txt │ │ ├── txtstr.conf │ │ ├── txtstr.h5 │ │ ├── txtstr.txt │ │ ├── txtuin16.conf │ │ ├── txtuin16.h5 │ │ ├── txtuin16.txt │ │ ├── txtuin32.conf │ │ ├── txtuin32.h5 │ │ └── txtuin32.txt ├── h5jam │ ├── .deps │ │ ├── getub.Po │ │ ├── h5jam.Po │ │ ├── h5jamgentest.Po │ │ ├── h5unjam.Po │ │ └── tellub.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── getub.c │ ├── h5jam.c │ ├── h5jamgentest.c │ ├── h5unjam.c │ ├── tellub.c │ ├── testfiles │ │ ├── h5jam-help.txt │ │ ├── h5jam-ub-nohdf5.txt │ │ ├── h5unjam-help.txt │ │ ├── tall.h5 │ │ ├── twithub.h5 │ │ ├── twithub513.h5 │ │ ├── u10.txt │ │ ├── u511.txt │ │ ├── u512.txt │ │ └── u513.txt │ ├── testh5jam.sh │ └── testh5jam.sh.in ├── h5ls │ ├── .deps │ │ └── h5ls.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5ls.c │ ├── testh5ls.sh │ └── testh5ls.sh.in ├── h5repack │ ├── .deps │ │ ├── dynlib_rpk.Plo │ │ ├── h5repack.Po │ │ ├── h5repack_copy.Po │ │ ├── h5repack_filters.Po │ │ ├── h5repack_main.Po │ │ ├── h5repack_opttable.Po │ │ ├── h5repack_parse.Po │ │ ├── h5repack_refs.Po │ │ ├── h5repack_verify.Po │ │ ├── h5repacktst.Po │ │ └── testh5repack_detect_szip.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── dynlib_rpk.c │ ├── h5repack.c │ ├── h5repack.h │ ├── h5repack.sh │ ├── h5repack.sh.in │ ├── h5repack_copy.c │ ├── h5repack_filters.c │ ├── h5repack_main.c │ ├── h5repack_opttable.c │ ├── h5repack_parse.c │ ├── h5repack_plugin.sh │ ├── h5repack_plugin.sh.in │ ├── h5repack_refs.c │ ├── h5repack_verify.c │ ├── h5repacktst.c │ ├── testfiles │ │ ├── deflate_limit.h5repack_layout.h5.ddl │ │ ├── h5repack-help.txt │ │ ├── h5repack.info │ │ ├── h5repack_attr.h5 │ │ ├── h5repack_attr_refs.h5 │ │ ├── h5repack_deflate.h5 │ │ ├── h5repack_early.h5 │ │ ├── h5repack_ext.bin │ │ ├── h5repack_ext.h5 │ │ ├── h5repack_fill.h5 │ │ ├── h5repack_filters.h5 │ │ ├── h5repack_filters.h5.tst │ │ ├── h5repack_fletcher.h5 │ │ ├── h5repack_hlink.h5 │ │ ├── h5repack_layout.UD.h5 │ │ ├── h5repack_layout.UD.h5-plugin_none.ddl │ │ ├── h5repack_layout.h5 │ │ ├── h5repack_layout.h5-plugin_test.ddl │ │ ├── h5repack_layout.h5.ddl │ │ ├── h5repack_layout2.h5 │ │ ├── h5repack_layout3.h5 │ │ ├── h5repack_layouto.h5 │ │ ├── h5repack_named_dtypes.h5 │ │ ├── h5repack_nbit.h5 │ │ ├── h5repack_objs.h5 │ │ ├── h5repack_refs.h5 │ │ ├── h5repack_shuffle.h5 │ │ ├── h5repack_soffset.h5 │ │ ├── h5repack_szip.h5 │ │ ├── plugin_none.h5repack_layout.UD.h5.tst │ │ ├── plugin_test.h5repack_layout.h5.tst │ │ └── ublock.bin │ └── testh5repack_detect_szip.c ├── h5stat │ ├── .deps │ │ ├── h5stat.Po │ │ └── h5stat_gentest.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5stat.c │ ├── h5stat_gentest.c │ ├── testfiles │ │ ├── h5stat_dims1.ddl │ │ ├── h5stat_dims2.ddl │ │ ├── h5stat_err1_dims.ddl │ │ ├── h5stat_err1_links.ddl │ │ ├── h5stat_err1_numattrs.ddl │ │ ├── h5stat_err2_numattrs.ddl │ │ ├── h5stat_filters-F.ddl │ │ ├── h5stat_filters-UD.ddl │ │ ├── h5stat_filters-UT.ddl │ │ ├── h5stat_filters-d.ddl │ │ ├── h5stat_filters-dT.ddl │ │ ├── h5stat_filters-file.ddl │ │ ├── h5stat_filters-g.ddl │ │ ├── h5stat_filters.ddl │ │ ├── h5stat_filters.h5 │ │ ├── h5stat_help1.ddl │ │ ├── h5stat_help2.ddl │ │ ├── h5stat_links1.ddl │ │ ├── h5stat_links2.ddl │ │ ├── h5stat_links3.ddl │ │ ├── h5stat_links4.ddl │ │ ├── h5stat_links5.ddl │ │ ├── h5stat_newgrat-UA.ddl │ │ ├── h5stat_newgrat-UG.ddl │ │ ├── h5stat_newgrat.ddl │ │ ├── h5stat_newgrat.h5 │ │ ├── h5stat_nofile.ddl │ │ ├── h5stat_notexist.ddl │ │ ├── h5stat_numattrs1.ddl │ │ ├── h5stat_numattrs2.ddl │ │ ├── h5stat_numattrs3.ddl │ │ ├── h5stat_numattrs4.ddl │ │ ├── h5stat_threshold.h5 │ │ ├── h5stat_tsohm.ddl │ │ └── h5stat_tsohm.h5 │ ├── testh5stat.sh │ └── testh5stat.sh.in ├── lib │ ├── .deps │ │ ├── h5diff.Plo │ │ ├── h5diff_array.Plo │ │ ├── h5diff_attr.Plo │ │ ├── h5diff_dset.Plo │ │ ├── h5diff_util.Plo │ │ ├── h5tools.Plo │ │ ├── h5tools_dump.Plo │ │ ├── h5tools_filters.Plo │ │ ├── h5tools_ref.Plo │ │ ├── h5tools_str.Plo │ │ ├── h5tools_type.Plo │ │ ├── h5tools_utils.Plo │ │ └── h5trav.Plo │ ├── CMakeLists.txt │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5diff.c │ ├── h5diff.h │ ├── h5diff_array.c │ ├── h5diff_attr.c │ ├── h5diff_dset.c │ ├── h5diff_util.c │ ├── h5tools.c │ ├── h5tools.h │ ├── h5tools_dump.c │ ├── h5tools_dump.h │ ├── h5tools_error.h │ ├── h5tools_filters.c │ ├── h5tools_ref.c │ ├── h5tools_ref.h │ ├── h5tools_str.c │ ├── h5tools_str.h │ ├── h5tools_type.c │ ├── h5tools_utils.c │ ├── h5tools_utils.h │ ├── h5trav.c │ ├── h5trav.h │ └── ph5diff.h ├── misc │ ├── .deps │ │ ├── h5debug.Po │ │ ├── h5mkgrp.Po │ │ ├── h5repart.Po │ │ ├── h5repart_gentest.Po │ │ ├── repart_test.Po │ │ └── talign.Po │ ├── CMakeLists.txt │ ├── CMakeTests.cmake │ ├── Makefile │ ├── Makefile.am │ ├── Makefile.in │ ├── h5cc │ ├── h5cc.in │ ├── h5debug.c │ ├── h5mkgrp.c │ ├── h5redeploy.in │ ├── h5repart.c │ ├── h5repart_gentest.c │ ├── repart_test.c │ ├── talign.c │ ├── testfiles │ │ ├── h5mkgrp_help.txt │ │ └── h5mkgrp_version.txt.in │ ├── testh5mkgrp.sh │ ├── testh5mkgrp.sh.in │ ├── testh5repart.sh │ └── testh5repart.sh.in └── testfiles │ ├── charsets.ddl │ ├── charsets.h5 │ ├── family_file00000.h5 │ ├── family_file00001.h5 │ ├── family_file00002.h5 │ ├── family_file00003.h5 │ ├── family_file00004.h5 │ ├── family_file00005.h5 │ ├── family_file00006.h5 │ ├── family_file00007.h5 │ ├── family_file00008.h5 │ ├── family_file00009.h5 │ ├── family_file00010.h5 │ ├── family_file00011.h5 │ ├── family_file00012.h5 │ ├── family_file00013.h5 │ ├── family_file00014.h5 │ ├── family_file00015.h5 │ ├── family_file00016.h5 │ ├── family_file00017.h5 │ ├── filter_fail.ddl │ ├── filter_fail.h5 │ ├── h5dump-help.txt │ ├── h5mkgrp_nested_lp.ls │ ├── h5mkgrp_nested_mult_lp.ls │ ├── h5mkgrp_nested_mult_p.ls │ ├── h5mkgrp_nested_p.ls │ ├── h5mkgrp_several.ls │ ├── h5mkgrp_several_l.ls │ ├── h5mkgrp_several_p.ls │ ├── h5mkgrp_several_v.ls │ ├── h5mkgrp_single.ls │ ├── h5mkgrp_single_l.ls │ ├── h5mkgrp_single_p.ls │ ├── h5mkgrp_single_v.ls │ ├── help-1.ls │ ├── help-2.ls │ ├── help-3.ls │ ├── nosuchfile.ls │ ├── out3.h5import │ ├── packedbits.ddl │ ├── packedbits.h5 │ ├── taindices.h5 │ ├── tall-1.ddl │ ├── tall-1.ls │ ├── tall-2.ddl │ ├── tall-2.ls │ ├── tall-2A.ddl │ ├── tall-2A.h5.xml │ ├── tall-2A0.ddl │ ├── tall-2B.ddl │ ├── tall-3.ddl │ ├── tall-4s.ddl │ ├── tall-5s.ddl │ ├── tall-6.ddl │ ├── tall-6.exp │ ├── tall-7.ddl │ ├── tall-7N.ddl │ ├── tall.h5 │ ├── tall.h5.xml │ ├── tallfilters.ddl │ ├── tarray1.ddl │ ├── tarray1.h5 │ ├── tarray1.h5.xml │ ├── tarray1.ls │ ├── tarray1_big.ddl │ ├── tarray1_big.h5 │ ├── tarray2.ddl │ ├── tarray2.h5 │ ├── tarray2.h5.xml │ ├── tarray3.ddl │ ├── tarray3.h5 │ ├── tarray3.h5.xml │ ├── tarray4.ddl │ ├── tarray4.h5 │ ├── tarray5.ddl │ ├── tarray5.h5 │ ├── tarray6.ddl │ ├── tarray6.h5 │ ├── tarray6.h5.xml │ ├── tarray7.ddl │ ├── tarray7.h5 │ ├── tarray7.h5.xml │ ├── tarray8.ddl │ ├── tarray8.h5 │ ├── tattr-1.ddl │ ├── tattr-2.ddl │ ├── tattr-3.ddl │ ├── tattr-4_be.ddl │ ├── tattr.h5 │ ├── tattr.h5.xml │ ├── tattr2.h5 │ ├── tattr2.ls │ ├── tattr4_be.h5 │ ├── tattrcontents1.ddl │ ├── tattrcontents2.ddl │ ├── tattrintsize.ddl │ ├── tattrintsize.h5 │ ├── tattrreg.ddl │ ├── tattrreg.h5 │ ├── tattrregR.ddl │ ├── tattrreg_be.ls │ ├── tattrreg_le.ls │ ├── tbigdims.ddl │ ├── tbigdims.h5 │ ├── tbin1.ddl │ ├── tbin2.ddl │ ├── tbin3.ddl │ ├── tbin4.ddl │ ├── tbinary.h5 │ ├── tbinregR.ddl │ ├── tbinregR.exp │ ├── tbitfields.h5 │ ├── tbitfields.h5.xml │ ├── tboot1.ddl │ ├── tboot2.ddl │ ├── tboot2A.ddl │ ├── tboot2B.ddl │ ├── tchar.h5 │ ├── tchar1.ddl │ ├── tchunked.ddl │ ├── tcmpdattrintsize.ddl │ ├── tcmpdattrintsize.h5 │ ├── tcmpdintarray.ddl │ ├── tcmpdintarray.h5 │ ├── tcmpdints.ddl │ ├── tcmpdints.h5 │ ├── tcmpdintsize.ddl │ ├── tcmpdintsize.h5 │ ├── tcomp-1.ddl │ ├── tcomp-1.ls │ ├── tcomp-2.ddl │ ├── tcomp-3.ddl │ ├── tcomp-4.ddl │ ├── tcompact.ddl │ ├── tcompound.h5 │ ├── tcompound.h5.xml │ ├── tcompound2.h5 │ ├── tcompound2.h5.xml │ ├── tcompound_complex.h5 │ ├── tcompound_complex.h5.xml │ ├── tcontents.ddl │ ├── tcontiguos.ddl │ ├── tdatareg.ddl │ ├── tdatareg.h5 │ ├── tdatareg.h5.xml │ ├── tdataregR.ddl │ ├── tdataregbe.ls │ ├── tdataregle.ls │ ├── tdeflate.ddl │ ├── tdset-1.ddl │ ├── tdset-1.ls │ ├── tdset-2.ddl │ ├── tdset-3s.ddl │ ├── tdset.h5 │ ├── tdset.h5.xml │ ├── tdset2.h5 │ ├── tdset2.h5.xml │ ├── tempty-dtd-2.h5.xml │ ├── tempty-dtd-uri.h5.xml │ ├── tempty-dtd.h5.xml │ ├── tempty-nons-2.h5.xml │ ├── tempty-nons-uri.h5.xml │ ├── tempty-nons.h5.xml │ ├── tempty-ns-2.h5.xml │ ├── tempty-ns.h5.xml │ ├── tempty.ddl │ ├── tempty.h5 │ ├── tempty.h5.xml │ ├── tempty.ls │ ├── tenum.h5 │ ├── tenum.h5.xml │ ├── texceedsubblock.ddl │ ├── texceedsubcount.ddl │ ├── texceedsubstart.ddl │ ├── texceedsubstride.ddl │ ├── texternal.ddl │ ├── textlink-1.ls │ ├── textlink.ddl │ ├── textlink.h5 │ ├── textlink.h5.xml │ ├── textlinkfar.ddl │ ├── textlinkfar.h5 │ ├── textlinksrc-1-old.ls │ ├── textlinksrc-1.ls │ ├── textlinksrc-2-old.ls │ ├── textlinksrc-2.ls │ ├── textlinksrc-3-old.ls │ ├── textlinksrc-3.ls │ ├── textlinksrc-4.ls │ ├── textlinksrc-5.ls │ ├── textlinksrc-6-old.ls │ ├── textlinksrc-6.ls │ ├── textlinksrc-7-old.ls │ ├── textlinksrc-7.ls │ ├── textlinksrc-nodangle-1.ls │ ├── textlinksrc-nodangle-2.ls │ ├── textlinksrc.ddl │ ├── textlinksrc.h5 │ ├── textlinktar.h5 │ ├── tfamily.ddl │ ├── tfamily00000.h5 │ ├── tfamily00001.h5 │ ├── tfamily00002.h5 │ ├── tfamily00003.h5 │ ├── tfamily00004.h5 │ ├── tfamily00005.h5 │ ├── tfamily00006.h5 │ ├── tfamily00007.h5 │ ├── tfamily00008.h5 │ ├── tfamily00009.h5 │ ├── tfamily00010.h5 │ ├── tfcontents1.h5 │ ├── tfcontents2.h5 │ ├── tfill.ddl │ ├── tfilters.h5 │ ├── tfletcher32.ddl │ ├── tfpformat.ddl │ ├── tfpformat.h5 │ ├── tfpformat.h5.xml │ ├── tfvalues.h5 │ ├── tgroup-1.ddl │ ├── tgroup-1.ls │ ├── tgroup-2.ddl │ ├── tgroup-2.ls │ ├── tgroup-3.ls │ ├── tgroup.h5 │ ├── tgroup.h5.xml │ ├── tgroup.ls │ ├── tgrp_comments.ddl │ ├── tgrp_comments.h5 │ ├── tgrp_comments.ls │ ├── thlink-1.ddl │ ├── thlink-1.ls │ ├── thlink-2.ddl │ ├── thlink-3.ddl │ ├── thlink-4.ddl │ ├── thlink-5.ddl │ ├── thlink.h5 │ ├── thlink.h5.xml │ ├── thlinks-nodangle-1.ls │ ├── thyperslab.ddl │ ├── thyperslab.h5 │ ├── tindicesno.ddl │ ├── tindicessub1.ddl │ ├── tindicessub2.ddl │ ├── tindicessub3.ddl │ ├── tindicessub4.ddl │ ├── tindicesyes.ddl │ ├── tintsattrs.ddl │ ├── tintsattrs.h5 │ ├── tlarge_objname.ddl │ ├── tlarge_objname.h5 │ ├── tldouble.h5 │ ├── tlonglinks.ddl │ ├── tlonglinks.h5 │ ├── tloop-1.ddl │ ├── tloop-1.ls │ ├── tloop.h5 │ ├── tloop.h5.xml │ ├── tloop2.h5 │ ├── tloop2.h5.xml │ ├── tmany.h5 │ ├── tmany.h5.xml │ ├── tmulti-b.h5 │ ├── tmulti-g.h5 │ ├── tmulti-l.h5 │ ├── tmulti-o.h5 │ ├── tmulti-r.h5 │ ├── tmulti-s.h5 │ ├── tmulti.ddl │ ├── tmultifile.ddl │ ├── tmultifile.ls │ ├── tname-amp.h5 │ ├── tname-amp.h5.xml │ ├── tname-apos.h5 │ ├── tname-apos.h5.xml │ ├── tname-gt.h5 │ ├── tname-gt.h5.xml │ ├── tname-lt.h5 │ ├── tname-lt.h5.xml │ ├── tname-quot.h5 │ ├── tname-quot.h5.xml │ ├── tname-sp.h5 │ ├── tname-sp.h5.xml │ ├── tnamed_dtype_attr.ddl │ ├── tnamed_dtype_attr.h5 │ ├── tnamed_dtype_attr.h5.xml │ ├── tnbit.ddl │ ├── tnestcomp-1.ddl │ ├── tnestcomp-1.ls │ ├── tnestcomp-2.ls │ ├── tnestcomp-3.ls │ ├── tnestcomp-4.ls │ ├── tnestedcmpddt.ddl │ ├── tnestedcmpddt.h5 │ ├── tnestedcomp.h5 │ ├── tnestedcomp.h5.xml │ ├── tno-subset.ddl │ ├── tno-subset.h5 │ ├── tnoattrdata.ddl │ ├── tnoattrddl.ddl │ ├── tnodata.ddl │ ├── tnodata.h5 │ ├── tnodata.h5.xml │ ├── tnoddl.ddl │ ├── tnoddlfile.ddl │ ├── tnoddlfile.exp │ ├── tnofilename-with-packed-bits.ddl │ ├── tnullspace.ddl │ ├── tnullspace.h5 │ ├── tobjref.h5 │ ├── tobjref.h5.xml │ ├── topaque.h5 │ ├── topaque.h5.xml │ ├── torderattr.h5 │ ├── torderattr1.ddl │ ├── torderattr1.h5.xml │ ├── torderattr2.ddl │ ├── torderattr2.h5.xml │ ├── torderattr3.ddl │ ├── torderattr3.h5.xml │ ├── torderattr4.ddl │ ├── torderattr4.h5.xml │ ├── tordercontents1.ddl │ ├── tordercontents2.ddl │ ├── tordergr.h5 │ ├── tordergr1.ddl │ ├── tordergr2.ddl │ ├── tordergr3.ddl │ ├── tordergr4.ddl │ ├── tordergr5.ddl │ ├── torderlinks1.ddl │ ├── torderlinks2.ddl │ ├── tpbitsArray.ddl │ ├── tpbitsCharLengthExceeded.ddl │ ├── tpbitsCharOffsetExceeded.ddl │ ├── tpbitsCompound.ddl │ ├── tpbitsIncomplete.ddl │ ├── tpbitsIntLengthExceeded.ddl │ ├── tpbitsIntOffsetExceeded.ddl │ ├── tpbitsLengthExceeded.ddl │ ├── tpbitsLengthPositive.ddl │ ├── tpbitsLongLengthExceeded.ddl │ ├── tpbitsLongOffsetExceeded.ddl │ ├── tpbitsMax.ddl │ ├── tpbitsMaxExceeded.ddl │ ├── tpbitsOffsetExceeded.ddl │ ├── tpbitsOffsetNegative.ddl │ ├── tpbitsOverlapped.ddl │ ├── tpbitsSigned.ddl │ ├── tpbitsSigned2.ddl │ ├── tpbitsSigned4.ddl │ ├── tpbitsSignedInt.ddl │ ├── tpbitsSignedInt4.ddl │ ├── tpbitsSignedInt8.ddl │ ├── tpbitsSignedIntWhole.ddl │ ├── tpbitsSignedLong.ddl │ ├── tpbitsSignedLong16.ddl │ ├── tpbitsSignedLong8.ddl │ ├── tpbitsSignedLongLong.ddl │ ├── tpbitsSignedLongLong16.ddl │ ├── tpbitsSignedLongLong32.ddl │ ├── tpbitsSignedLongLongWhole.ddl │ ├── tpbitsSignedLongLongWhole1.ddl │ ├── tpbitsSignedLongLongWhole63.ddl │ ├── tpbitsSignedLongWhole.ddl │ ├── tpbitsSignedWhole.ddl │ ├── tpbitsUnsigned.ddl │ ├── tpbitsUnsigned2.ddl │ ├── tpbitsUnsigned4.ddl │ ├── tpbitsUnsignedInt.ddl │ ├── tpbitsUnsignedInt4.ddl │ ├── tpbitsUnsignedInt8.ddl │ ├── tpbitsUnsignedIntWhole.ddl │ ├── tpbitsUnsignedLong.ddl │ ├── tpbitsUnsignedLong16.ddl │ ├── tpbitsUnsignedLong8.ddl │ ├── tpbitsUnsignedLongLong.ddl │ ├── tpbitsUnsignedLongLong16.ddl │ ├── tpbitsUnsignedLongLong32.ddl │ ├── tpbitsUnsignedLongLongWhole.ddl │ ├── tpbitsUnsignedLongLongWhole1.ddl │ ├── tpbitsUnsignedLongLongWhole63.ddl │ ├── tpbitsUnsignedLongWhole.ddl │ ├── tpbitsUnsignedWhole.ddl │ ├── tperror.ddl │ ├── tqmarkfile.ddl │ ├── trawdatafile.ddl │ ├── trawdatafile.exp │ ├── trawssetfile.ddl │ ├── trawssetfile.exp │ ├── treadfilter.ddl │ ├── treadintfilter.ddl │ ├── tref-escapes-at.h5 │ ├── tref-escapes-at.h5.xml │ ├── tref-escapes.h5 │ ├── tref-escapes.h5.xml │ ├── tref.h5 │ ├── tref.h5.xml │ ├── treference.ddl │ ├── tsaf.ddl │ ├── tsaf.h5 │ ├── tsaf.h5.xml │ ├── tsaf.ls │ ├── tscalarattrintsize.ddl │ ├── tscalarattrintsize.h5 │ ├── tscalarintattrsize.ddl │ ├── tscalarintattrsize.h5 │ ├── tscalarintsize.ddl │ ├── tscalarintsize.h5 │ ├── tscalarstring.ddl │ ├── tscalarstring.h5 │ ├── tscaleoffset.ddl │ ├── tshuffle.ddl │ ├── tslink-1.ddl │ ├── tslink-1.ls │ ├── tslink-2.ddl │ ├── tslink-D.ddl │ ├── tslink.h5 │ ├── tslink.h5.xml │ ├── tsoftlinks-1.ls │ ├── tsoftlinks-2.ls │ ├── tsoftlinks-3.ls │ ├── tsoftlinks-4.ls │ ├── tsoftlinks-5.ls │ ├── tsoftlinks-nodangle-1.ls │ ├── tsoftlinks.h5 │ ├── tsplit_file-m.h5 │ ├── tsplit_file-r.h5 │ ├── tsplit_file.ddl │ ├── tstarfile.ddl │ ├── tstr-1.ddl │ ├── tstr-1.ls │ ├── tstr-2.ddl │ ├── tstr.h5 │ ├── tstr.h5.xml │ ├── tstr2.h5 │ ├── tstr2.h5.xml │ ├── tstr2bin2.exp │ ├── tstr2bin6.exp │ ├── tstr3.h5 │ ├── tstring-at.h5 │ ├── tstring-at.h5.xml │ ├── tstring.ddl │ ├── tstring.h5 │ ├── tstring.h5.xml │ ├── tstring2.ddl │ ├── tstringe.ddl │ ├── tszip.ddl │ ├── tudlink-1.ddl │ ├── tudlink-1.ls │ ├── tudlink-2.ddl │ ├── tudlink.h5 │ ├── tudlink.h5.xml │ ├── tuserfilter.ddl │ ├── tvldtypes1.ddl │ ├── tvldtypes1.h5 │ ├── tvldtypes1.h5.xml │ ├── tvldtypes1.ls │ ├── tvldtypes2.ddl │ ├── tvldtypes2.h5 │ ├── tvldtypes2.h5.xml │ ├── tvldtypes2be.ls │ ├── tvldtypes2le.ls │ ├── tvldtypes3.ddl │ ├── tvldtypes3.h5 │ ├── tvldtypes3.h5.xml │ ├── tvldtypes4.ddl │ ├── tvldtypes4.h5 │ ├── tvldtypes4.h5.xml │ ├── tvldtypes5.ddl │ ├── tvldtypes5.h5 │ ├── tvldtypes5.h5.xml │ ├── tvlstr.ddl │ ├── tvlstr.h5 │ ├── tvlstr.h5.xml │ ├── tvms.ddl │ ├── tvms.h5 │ ├── twidedisplay.ddl │ ├── twithddl.exp │ ├── twithddlfile.ddl │ ├── twithddlfile.exp │ ├── zerodim.ddl │ └── zerodim.h5 └── vms ├── COPYING ├── build.com ├── c++ ├── examples │ ├── check.com │ └── make.com ├── src │ └── make.com └── test │ ├── H5srcdir_str.h │ ├── check.com │ └── make.com ├── examples ├── check.com └── make.com ├── fortran ├── examples │ ├── check.com │ └── make.com ├── src │ └── make.com └── test │ ├── check.com │ └── make.com ├── install.com ├── make.com ├── src ├── h5pubconf.h └── make.com ├── test ├── H5srcdir_str.h ├── check.com └── make.com └── tools ├── h5copy ├── check_h5copy.com └── make.com ├── h5diff ├── check_h5diff.com ├── make.com └── remove_exit.sh ├── h5dump ├── check_h5dump.com └── make.com ├── h5import ├── check_h5import.com └── make.com ├── h5jam ├── check_h5jam.com └── make.com ├── h5ls ├── check_h5ls.com └── make.com ├── h5repack ├── check_h5repack.com └── make.com ├── h5stat └── make.com ├── lib └── make.com ├── misc └── make.com └── testfiles ├── tattr-3.ddl ├── tdset-2.ddl ├── tgroup-2.ddl └── tperror.ddl /.gitignore: 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