20 | * The default metrics calculated are found in {@link org.tribuo.anomaly.evaluation.AnomalyMetrics}. 21 | *
22 | * User specified metrics are not currently supported.
23 | */
24 | package org.tribuo.anomaly.evaluation;
--------------------------------------------------------------------------------
/AnomalyDetection/Core/src/main/java/org/tribuo/anomaly/example/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides anomaly data generators used for demos and testing implementations.
19 | */
20 | package org.tribuo.anomaly.example;
--------------------------------------------------------------------------------
/AnomalyDetection/Core/src/main/java/org/tribuo/anomaly/protos/AnomalyInfoProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-anomaly-core.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.anomaly.protos;
6 |
7 | public interface AnomalyInfoProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.anomaly.AnomalyInfoProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * int64 expectedCount = 1;
13 | * @return The expectedCount.
14 | */
15 | long getExpectedCount();
16 |
17 | /**
18 | * int64 anomalyCount = 2;
19 | * @return The anomalyCount.
20 | */
21 | long getAnomalyCount();
22 |
23 | /**
24 | * int32 unknownCount = 3;
25 | * @return The unknownCount.
26 | */
27 | int getUnknownCount();
28 | }
29 |
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/AnomalyDetection/Core/src/main/java/org/tribuo/anomaly/protos/EventProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-anomaly-core.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.anomaly.protos;
6 |
7 | public interface EventProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.anomaly.EventProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * .tribuo.anomaly.EventProto.EventType event = 1;
13 | * @return The enum numeric value on the wire for event.
14 | */
15 | int getEventValue();
16 | /**
17 | * .tribuo.anomaly.EventProto.EventType event = 1;
18 | * @return The event.
19 | */
20 | org.tribuo.anomaly.protos.EventProto.EventType getEvent();
21 |
22 | /**
23 | * double score = 2;
24 | * @return The score.
25 | */
26 | double getScore();
27 | }
28 |
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/AnomalyDetection/Core/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/AnomalyDetection/Core/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/AnomalyDetection/Core/src/test/resources/org/tribuo/anomaly/event-anomaly-431.tribuo:
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/AnomalyDetection/Core/src/test/resources/org/tribuo/anomaly/factory-anomaly-431.tribuo:
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1 | !org.tribuo.anomaly.AnomalyFactory
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/AnomalyDetection/Core/src/test/resources/org/tribuo/anomaly/immutableinfo-anomaly-431.tribuo:
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1 | 'org.tribuo.anomaly.ImmutableAnomalyInfo=
2 | 3type.googleapis.com/tribuo.anomaly.AnomalyInfoProto
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/AnomalyDetection/Core/src/test/resources/org/tribuo/anomaly/mutableinfo-anomaly-431.tribuo:
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1 | %org.tribuo.anomaly.MutableAnomalyInfo=
2 | 3type.googleapis.com/tribuo.anomaly.AnomalyInfoProto
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/AnomalyDetection/LibLinear/src/main/java/org/tribuo/anomaly/liblinear/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an interface to LibLinear-java for anomaly detection problems.
19 | */
20 | package org.tribuo.anomaly.liblinear;
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/AnomalyDetection/LibLinear/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/AnomalyDetection/LibLinear/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/AnomalyDetection/LibLinear/src/test/resources/org/tribuo/anomaly/liblinear/liblinear-anomaly-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/AnomalyDetection/LibLinear/src/test/resources/org/tribuo/anomaly/liblinear/liblinear-anomaly-431.tribuo
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/AnomalyDetection/LibSVM/src/main/java/org/tribuo/anomaly/libsvm/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an interface to LibSVM for anomaly detection problems.
19 | */
20 | package org.tribuo.anomaly.libsvm;
--------------------------------------------------------------------------------
/AnomalyDetection/LibSVM/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/AnomalyDetection/LibSVM/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/AnomalyDetection/LibSVM/src/test/resources/org/tribuo/anomaly/libsvm/libsvm-anomaly-431.tribuo:
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/Classification/Core/src/main/java/org/tribuo/classification/baseline/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides simple baseline multiclass classifiers.
19 | *
20 | * If you can't beat these baselines then your ML system isn't working. 21 | *
22 | */ 23 | package org.tribuo.classification.baseline; -------------------------------------------------------------------------------- /Classification/Core/src/main/java/org/tribuo/classification/ensemble/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides majority vote ensemble combiners for classification 19 | * along with an implementation of multiclass Adaboost. 20 | */ 21 | package org.tribuo.classification.ensemble; -------------------------------------------------------------------------------- /Classification/Core/src/main/java/org/tribuo/classification/example/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2021, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides a multiclass data generator used for testing implementations, along with several synthetic data generators 19 | * for 2d binary classification problems to be used in demos or tutorials. 20 | */ 21 | package org.tribuo.classification.example; -------------------------------------------------------------------------------- /Classification/Core/src/main/java/org/tribuo/classification/protos/LabelProtoOrBuilder.java: -------------------------------------------------------------------------------- 1 | // Generated by the protocol buffer compiler. DO NOT EDIT! 2 | // source: tribuo-classification-core.proto 3 | 4 | // Protobuf Java Version: 3.25.6 5 | package org.tribuo.classification.protos; 6 | 7 | public interface LabelProtoOrBuilder extends 8 | // @@protoc_insertion_point(interface_extends:tribuo.classification.LabelProto) 9 | com.google.protobuf.MessageOrBuilder { 10 | 11 | /** 12 | *string label = 1;
13 | * @return The label.
14 | */
15 | java.lang.String getLabel();
16 | /**
17 | * string label = 1;
18 | * @return The bytes for label.
19 | */
20 | com.google.protobuf.ByteString
21 | getLabelBytes();
22 |
23 | /**
24 | * double score = 2;
25 | * @return The score.
26 | */
27 | double getScore();
28 | }
29 |
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/Classification/Core/src/main/java/org/tribuo/classification/sequence/example/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a classification sequence data generator for smoke testing implementations.
19 | */
20 | package org.tribuo.classification.sequence.example;
--------------------------------------------------------------------------------
/Classification/Core/src/main/java/org/tribuo/classification/sequence/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides infrastructure for {@link org.tribuo.sequence.SequenceModel}s which
19 | * emit {@link org.tribuo.classification.Label}s at each step of the sequence.
20 | */
21 | package org.tribuo.classification.sequence;
--------------------------------------------------------------------------------
/Classification/Core/src/main/java/org/tribuo/classification/sequence/viterbi/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of Viterbi for generating structured outputs, which can sit on top of any
19 | * {@link org.tribuo.classification.Label} based classification model.
20 | */
21 | package org.tribuo.classification.sequence.viterbi;
--------------------------------------------------------------------------------
/Classification/Core/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/Classification/Core/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/Core/src/test/resources/org/tribuo/classification/baseline/dummyclf-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Classification/Core/src/test/resources/org/tribuo/classification/baseline/dummyclf-431.tribuo
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/Classification/Core/src/test/resources/org/tribuo/classification/factory-clf-431.tribuo:
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1 | &org.tribuo.classification.LabelFactory
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/Classification/Core/src/test/resources/org/tribuo/classification/fullvote-combiner-clf-431.tribuo:
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1 | >org.tribuo.classification.ensemble.FullyWeightedVotingCombiner
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/Classification/Core/src/test/resources/org/tribuo/classification/immutableinfo-clf-431.tribuo:
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1 | ,org.tribuo.classification.ImmutableLabelInfoZ
2 | Atype.googleapis.com/tribuo.classification.ImmutableLabelInfoProto
3 | OTHER
4 | TEST
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/Classification/Core/src/test/resources/org/tribuo/classification/label-clf-431.tribuo:
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/Classification/Core/src/test/resources/org/tribuo/classification/mutableinfo-clf-431.tribuo:
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1 | *org.tribuo.classification.MutableLabelInfoV
2 | ?type.googleapis.com/tribuo.classification.MutableLabelInfoProto
3 | OTHER
4 | TEST
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/Classification/Core/src/test/resources/org/tribuo/classification/vote-combiner-clf-431.tribuo:
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1 | 1org.tribuo.classification.ensemble.VotingCombiner
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/Classification/DecisionTree/src/main/java/org/tribuo/classification/dtree/impl/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides internal implementation classes for classification decision trees.
19 | */
20 | package org.tribuo.classification.dtree.impl;
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/Classification/DecisionTree/src/main/java/org/tribuo/classification/dtree/impurity/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides classification impurity metrics for decision trees.
19 | */
20 | package org.tribuo.classification.dtree.impurity;
--------------------------------------------------------------------------------
/Classification/DecisionTree/src/main/java/org/tribuo/classification/dtree/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides implementations of decision trees for classification problems.
19 | */
20 | package org.tribuo.classification.dtree;
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/Classification/DecisionTree/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/Classification/DecisionTree/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/DecisionTree/src/test/resources/org/tribuo/classification/dtree/adaboost-clf-431.tribuo:
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/Classification/DecisionTree/src/test/resources/org/tribuo/classification/dtree/cart-clf-431.tribuo:
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/Classification/DecisionTree/src/test/resources/pure_leaf_data.csv:
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1 | Label,F1,F2,F3,F4
2 | A,1,0,0,0
3 | B,1,1,0,0
4 | C,0,0,1,0
5 | C,0,0,1,1
6 | D,0,0,1,1
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/Classification/Experiments/src/main/java/org/tribuo/classification/experiments/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a set of main methods for interacting with classification tasks.
19 | */
20 | package org.tribuo.classification.experiments;
--------------------------------------------------------------------------------
/Classification/Experiments/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Classification/Experiments/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/Explanations/src/main/java/org/tribuo/classification/explanations/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides core infrastructure for local model based explanations.
19 | */
20 | package org.tribuo.classification.explanations;
--------------------------------------------------------------------------------
/Classification/Explanations/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/Classification/Explanations/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/Explanations/src/test/resources/org/tribuo/classification/explanations/lime/test-columnar.csv:
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1 | Response,A,B,C,D,TextField
2 | Y,Small, 1.0,-1.0,Red,Many fields have text.
3 | Y,Small, 1.0,1.0,Green,In this case the word text.
4 | N,Small, 4.0,9.0,Green,Is the signifier for the class label.
5 | N,Medium,6.0,25.0,Yellow,Without that word it's not positive.
6 | N,Medium,8.0,40.0,Red,Doesn't matter what the other features are.
7 | N,Medium,9.0,20.0,Yellow,Not in the slightest.
8 | Y,Large, -1.,15.0,Green,Just needs the word text.
9 | N,Large, -2.,14.0,Red,Otherwise it's all irrelevant.
10 | N,Large, -5.,13.0,Red,Bored of typing now.
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/Classification/LibLinear/src/main/java/org/tribuo/classification/liblinear/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an interface to LibLinear-java for classification problems.
19 | */
20 | package org.tribuo.classification.liblinear;
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/Classification/LibLinear/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Classification/LibLinear/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/LibLinear/src/test/resources/models/L1R_L2LOSS_SVC.model:
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/Classification/LibLinear/src/test/resources/models/L1R_LR.model:
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/Classification/LibLinear/src/test/resources/models/L2R_L1LOSS_SVC_DUAL.model:
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/Classification/LibLinear/src/test/scripts/generate-model.sh:
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1 | #!/usr/bin/env bash
2 |
3 | LLTYPE=$1
4 | MODEL_NAME=$2
5 | TRAINDATA=$3
6 | TESTDATA=$4
7 |
8 | MAINCLASS="org.tribuo.classification.liblinear.TrainTest"
9 | CLASSPATH=target/tribuo-classification-liblinear-4.0.0-jar-with-dependencies.jar
10 |
11 | java -cp $CLASSPATH $MAINCLASS -s TEXT --liblinear-solver-type ${LLTYPE} -f ${MODEL_NAME}.model -u $TRAINDATA -v $TESTDATA
12 |
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/Classification/LibSVM/src/main/java/org/tribuo/classification/libsvm/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an interface to LibSVM for classification problems.
19 | */
20 | package org.tribuo.classification.libsvm;
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/Classification/LibSVM/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Classification/LibSVM/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/LibSVM/src/test/scripts/generate-model.sh:
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1 | #!/usr/bin/env bash
2 |
3 | LSTYPE=$1
4 | KTYPE=$2
5 | MODEL_NAME=$3
6 | TRAINDATA=$4
7 | TESTDATA=$5
8 |
9 | MAINCLASS="org.tribuo.classification.libsvm.TrainTest"
10 | CLASSPATH=target/tribuo-classification-libsvm-4.0.0-jar-with-dependencies.jar
11 |
12 | java -cp $CLASSPATH $MAINCLASS -s TEXT --svm-type ${LSTYPE} --svm-kernel ${KTYPE} -f ${MODEL_NAME}.model -u ${TRAINDATA} -v ${TESTDATA}
13 |
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/Classification/MultinomialNaiveBayes/src/main/java/org/tribuo/classification/mnb/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of multinomial naive bayes (i.e., naive bayes for non-negative count data).
19 | */
20 | package org.tribuo.classification.mnb;
--------------------------------------------------------------------------------
/Classification/MultinomialNaiveBayes/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Classification/MultinomialNaiveBayes/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/MultinomialNaiveBayes/src/test/resources/org/tribuo/classification/mnb/mnb-431.tribuo:
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/Classification/SGD/src/main/java/org/tribuo/classification/sgd/crf/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of a linear chain CRF trained using Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.classification.sgd.crf;
--------------------------------------------------------------------------------
/Classification/SGD/src/main/java/org/tribuo/classification/sgd/fm/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of a classification factorization machine using Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.classification.sgd.fm;
--------------------------------------------------------------------------------
/Classification/SGD/src/main/java/org/tribuo/classification/sgd/kernel/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a SGD implementation of a Kernel SVM using the Pegasos algorithm.
19 | */
20 | package org.tribuo.classification.sgd.kernel;
--------------------------------------------------------------------------------
/Classification/SGD/src/main/java/org/tribuo/classification/sgd/linear/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of a classification linear model using Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.classification.sgd.linear;
--------------------------------------------------------------------------------
/Classification/SGD/src/main/java/org/tribuo/classification/sgd/objectives/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides classification loss functions for Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.classification.sgd.objectives;
--------------------------------------------------------------------------------
/Classification/SGD/src/main/java/org/tribuo/classification/sgd/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides infrastructure for Stochastic Gradient Descent for classification problems.
19 | */
20 | package org.tribuo.classification.sgd;
--------------------------------------------------------------------------------
/Classification/SGD/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/Classification/SGD/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Classification/XGBoost/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Classification/XGBoost/src/test/scripts/generate-model.sh:
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1 | #!/usr/bin/env bash
2 |
3 | NUM_TREES=$1
4 | MODEL_NAME=$2
5 | TRAINDATA=$3
6 | TESTDATA=$4
7 |
8 | MAINCLASS="org.tribuo.classification.xgboost.TrainTest"
9 | CLASSPATH=target/tribuo-classification-xgboost-4.0.0-jar-with-dependencies.jar
10 |
11 | java -cp $CLASSPATH $MAINCLASS -s TEXT --xgb-ensemble-size ${NUM_TREES} --xgb-num-threads 1 -f ${MODEL_NAME}.model -u $TRAINDATA -v $TESTDATA
12 |
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/Clustering/Core/src/main/java/org/tribuo/clustering/evaluation/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Evaluation classes for clustering.
19 | * 20 | * The default metrics calculated are found in {@link org.tribuo.clustering.evaluation.ClusteringMetrics}. 21 | *
22 | * User specified metrics are not currently supported.
23 | */
24 | package org.tribuo.clustering.evaluation;
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/Clustering/Core/src/main/java/org/tribuo/clustering/example/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides clustering data generators used for demos and testing implementations.
19 | */
20 | package org.tribuo.clustering.example;
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/Clustering/Core/src/main/java/org/tribuo/clustering/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides classes and infrastructure for working with clustering problems.
19 | */
20 | package org.tribuo.clustering;
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/Clustering/Core/src/main/java/org/tribuo/clustering/protos/ClusterIDProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-clustering-core.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.clustering.protos;
6 |
7 | public interface ClusterIDProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.clustering.ClusterIDProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * int32 id = 1;
13 | * @return The id.
14 | */
15 | int getId();
16 |
17 | /**
18 | * double score = 2;
19 | * @return The score.
20 | */
21 | double getScore();
22 | }
23 |
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/Clustering/Core/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Clustering/Core/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Clustering/Core/src/test/resources/org/tribuo/clustering/clusterid-clustering-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Clustering/Core/src/test/resources/org/tribuo/clustering/clusterid-clustering-431.tribuo
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/Clustering/Core/src/test/resources/org/tribuo/clustering/factory-clustering-431.tribuo:
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1 | 'org.tribuo.clustering.ClusteringFactory
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/Clustering/Core/src/test/resources/org/tribuo/clustering/immutableinfo-clustering-431.tribuo:
--------------------------------------------------------------------------------
1 | -org.tribuo.clustering.ImmutableClusteringInfoG
2 | 9type.googleapis.com/tribuo.clustering.ClusteringInfoProto
3 |
4 |
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/Clustering/Core/src/test/resources/org/tribuo/clustering/mutableinfo-clustering-431.tribuo:
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1 | +org.tribuo.clustering.MutableClusteringInfoI
2 | 9type.googleapis.com/tribuo.clustering.ClusteringInfoProto
3 |
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/Clustering/GMM/src/main/java/org/tribuo/clustering/gmm/package-info.java:
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1 | /*
2 | * Copyright (c) 2024, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Gaussian Mixture Model training and inference.
19 | */
20 | package org.tribuo.clustering.gmm;
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/Clustering/Hdbscan/src/main/java/org/tribuo/clustering/hdbscan/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of HDBSCAN*.
19 | */
20 | package org.tribuo.clustering.hdbscan;
21 |
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/Clustering/Hdbscan/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Clustering/Hdbscan/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Clustering/Hdbscan/src/test/resources/Hdbscan_minClSize7_L2_k7_nt1_v4.2.model:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Clustering/Hdbscan/src/test/resources/Hdbscan_minClSize7_L2_k7_nt1_v4.2.model
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/Clustering/Hdbscan/src/test/resources/basic-gaussians-predict-with-outliers.csv:
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1 | Feature1,Feature2,Feature3
2 | -2.3302356259487063,3.9431416146381046,1.0315528543744679
3 | 12.5,15.0,17.1
4 | 0.41679363204429154,8.247732287302664,9.810651956897404
5 | -16.0,-13.3,14.4
6 | 1.2947698963877157,-1.0272570581099394,1.6991984313559259
7 | -14.9,-13.9,-15.5
8 |
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/Clustering/Hdbscan/src/test/resources/org/tribuo/clustering/hdbscan/hdbscan-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Clustering/Hdbscan/src/test/resources/org/tribuo/clustering/hdbscan/hdbscan-431.tribuo
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/Clustering/KMeans/src/main/java/org/tribuo/clustering/kmeans/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a multithreaded implementation of K-Means, with a
19 | * configurable distance function.
20 | */
21 | package org.tribuo.clustering.kmeans;
--------------------------------------------------------------------------------
/Clustering/KMeans/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/Clustering/KMeans/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Clustering/KMeans/src/test/resources/org/tribuo/clustering/kmeans/kmeans-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Clustering/KMeans/src/test/resources/org/tribuo/clustering/kmeans/kmeans-431.tribuo
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/Common/LibLinear/src/main/java/org/tribuo/common/liblinear/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides base classes for using liblinear from Tribuo.
19 | */
20 | package org.tribuo.common.liblinear;
--------------------------------------------------------------------------------
/Common/LibLinear/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/Common/LibLinear/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Common/LibSVM/src/main/java/org/tribuo/common/libsvm/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * The base interface to LibSVM.
19 | */
20 | package org.tribuo.common.libsvm;
--------------------------------------------------------------------------------
/Common/LibSVM/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Common/LibSVM/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Common/NearestNeighbour/src/main/java/org/tribuo/common/nearest/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a K-Nearest Neighbours implementation which works across
19 | * all Tribuo {@link org.tribuo.Output} types.
20 | */
21 | package org.tribuo.common.nearest;
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/Common/NearestNeighbour/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Common/NearestNeighbour/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Common/NearestNeighbour/src/test/resources/KNNTrainerRegressor_k3_L2_nt2_voting_streams_v4.2.model:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Common/NearestNeighbour/src/test/resources/KNNTrainerRegressor_k3_L2_nt2_voting_streams_v4.2.model
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/Common/NearestNeighbour/src/test/resources/org/tribuo/common/nearest/knn-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Common/NearestNeighbour/src/test/resources/org/tribuo/common/nearest/knn-431.tribuo
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/Common/SGD/src/main/java/org/tribuo/common/sgd/package-info.java:
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1 | /*
2 | * Copyright (c) 2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides the base classes for models trained with stochastic gradient descent.
19 | */
20 | package org.tribuo.common.sgd;
--------------------------------------------------------------------------------
/Common/SGD/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Common/SGD/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Common/Trees/src/main/java/org/tribuo/common/tree/impl/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides internal implementation classes for building decision trees.
19 | */
20 | package org.tribuo.common.tree.impl;
--------------------------------------------------------------------------------
/Common/Trees/src/main/java/org/tribuo/common/tree/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides common functionality for building decision trees, irrespective
19 | * of the predicted {@link org.tribuo.Output}. Also
20 | * has implementations of Random Forests and Extra Trees.
21 | */
22 | package org.tribuo.common.tree;
--------------------------------------------------------------------------------
/Common/Trees/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Common/Trees/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Common/XGBoost/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Common/XGBoost/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Core/src/main/java/org/tribuo/WeightedExamples.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | package org.tribuo;
18 |
19 | /**
20 | * Tag interface denoting that a {@link Trainer} can use example weights.
21 | */
22 | public interface WeightedExamples { }
23 |
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/Core/src/main/java/org/tribuo/dataset/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides utility datasets which subsample or otherwise
19 | * transform the wrapped dataset.
20 | */
21 | package org.tribuo.dataset;
--------------------------------------------------------------------------------
/Core/src/main/java/org/tribuo/datasource/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Simple data sources for ingesting or aggregating data.
19 | */
20 | package org.tribuo.datasource;
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/Core/src/main/java/org/tribuo/ensemble/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an interface for model prediction combinations,
19 | * two base classes for ensemble models, a base class for
20 | * ensemble excuses, and a Bagging implementation.
21 | */
22 | package org.tribuo.ensemble;
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/Core/src/main/java/org/tribuo/evaluation/metrics/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * This package contains the infrastructure classes for building evaluation metrics.
19 | */
20 | package org.tribuo.evaluation.metrics;
--------------------------------------------------------------------------------
/Core/src/main/java/org/tribuo/evaluation/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Evaluation base classes, along with code for train/test splits and cross validation.
19 | */
20 | package org.tribuo.evaluation;
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/Core/src/main/java/org/tribuo/protos/core/IDFTransformerProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-core-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.protos.core;
6 |
7 | public interface IDFTransformerProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.core.IDFTransformerProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * double df = 1;
13 | * @return The df.
14 | */
15 | double getDf();
16 |
17 | /**
18 | * double N = 2;
19 | * @return The n.
20 | */
21 | double getN();
22 | }
23 |
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/Core/src/main/java/org/tribuo/protos/core/LinearScalingTransformerProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-core-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.protos.core;
6 |
7 | public interface LinearScalingTransformerProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.core.LinearScalingTransformerProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * double observedMin = 1;
13 | * @return The observedMin.
14 | */
15 | double getObservedMin();
16 |
17 | /**
18 | * double observedMax = 2;
19 | * @return The observedMax.
20 | */
21 | double getObservedMax();
22 |
23 | /**
24 | * double targetMin = 3;
25 | * @return The targetMin.
26 | */
27 | double getTargetMin();
28 |
29 | /**
30 | * double targetMax = 4;
31 | * @return The targetMax.
32 | */
33 | double getTargetMax();
34 | }
35 |
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/Core/src/main/java/org/tribuo/protos/core/MeanStdDevTransformerProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-core-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.protos.core;
6 |
7 | public interface MeanStdDevTransformerProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.core.MeanStdDevTransformerProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * double observedMean = 1;
13 | * @return The observedMean.
14 | */
15 | double getObservedMean();
16 |
17 | /**
18 | * double observedStdDev = 2;
19 | * @return The observedStdDev.
20 | */
21 | double getObservedStdDev();
22 |
23 | /**
24 | * double targetMean = 3;
25 | * @return The targetMean.
26 | */
27 | double getTargetMean();
28 |
29 | /**
30 | * double targetStdDev = 4;
31 | * @return The targetStdDev.
32 | */
33 | double getTargetStdDev();
34 | }
35 |
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/Core/src/main/java/org/tribuo/protos/core/MessageDigestHasherProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-core-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.protos.core;
6 |
7 | public interface MessageDigestHasherProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.core.MessageDigestHasherProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * string hash_type = 1;
13 | * @return The hashType.
14 | */
15 | java.lang.String getHashType();
16 | /**
17 | * string hash_type = 1;
18 | * @return The bytes for hashType.
19 | */
20 | com.google.protobuf.ByteString
21 | getHashTypeBytes();
22 | }
23 |
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/Core/src/main/java/org/tribuo/protos/core/ModHashCodeHasherProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-core-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.protos.core;
6 |
7 | public interface ModHashCodeHasherProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.core.ModHashCodeHasherProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * int32 dimension = 1;
13 | * @return The dimension.
14 | */
15 | int getDimension();
16 | }
17 |
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/Core/src/main/java/org/tribuo/protos/core/SimpleTransformProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-core-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.protos.core;
6 |
7 | public interface SimpleTransformProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.core.SimpleTransformProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * string op = 1;
13 | * @return The op.
14 | */
15 | java.lang.String getOp();
16 | /**
17 | * string op = 1;
18 | * @return The bytes for op.
19 | */
20 | com.google.protobuf.ByteString
21 | getOpBytes();
22 |
23 | /**
24 | * double first_operand = 2;
25 | * @return The firstOperand.
26 | */
27 | double getFirstOperand();
28 |
29 | /**
30 | * double second_operand = 3;
31 | * @return The secondOperand.
32 | */
33 | double getSecondOperand();
34 | }
35 |
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/Core/src/main/java/org/tribuo/provenance/DataProvenance.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | package org.tribuo.provenance;
18 |
19 | import com.oracle.labs.mlrg.olcut.provenance.ObjectProvenance;
20 |
21 | /**
22 | * Tag interface for data sources provenances.
23 | */
24 | public interface DataProvenance extends ObjectProvenance { }
25 |
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/Core/src/main/java/org/tribuo/provenance/FeatureSelectorProvenance.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | package org.tribuo.provenance;
18 |
19 | import com.oracle.labs.mlrg.olcut.provenance.ConfiguredObjectProvenance;
20 |
21 | /**
22 | * A tag interface for feature selection algorithms.
23 | */
24 | public interface FeatureSelectorProvenance extends ConfiguredObjectProvenance { }
25 |
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/Core/src/main/java/org/tribuo/provenance/impl/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides internal implementations for empty provenance classes and TrainerProvenance.
19 | */
20 | package org.tribuo.provenance.impl;
--------------------------------------------------------------------------------
/Core/src/main/java/org/tribuo/provenance/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides Tribuo specific infrastructure for the
19 | * {@link com.oracle.labs.mlrg.olcut.provenance.Provenance} system which
20 | * tracks models and datasets.
21 | */
22 | package org.tribuo.provenance;
--------------------------------------------------------------------------------
/Core/src/main/java/org/tribuo/sequence/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides core classes for working with sequences of {@link org.tribuo.Example}s.
19 | *
20 | * Mirrors the classes in {@link org.tribuo} but operating on {@link org.tribuo.sequence.SequenceExample}. 21 | *
22 | */ 23 | package org.tribuo.sequence; -------------------------------------------------------------------------------- /Core/src/main/java/org/tribuo/transform/TransformationProvenance.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | package org.tribuo.transform; 18 | 19 | import com.oracle.labs.mlrg.olcut.provenance.ConfiguredObjectProvenance; 20 | 21 | /** 22 | * A tag interface for provenances in the transformation system. 23 | */ 24 | public interface TransformationProvenance extends ConfiguredObjectProvenance { 25 | } 26 | -------------------------------------------------------------------------------- /Core/src/main/java/org/tribuo/transform/transformations/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides implementations of standard transformations like binning, scaling, taking logs and exponents. 19 | */ 20 | package org.tribuo.transform.transformations; -------------------------------------------------------------------------------- /Core/src/main/java/org/tribuo/util/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides utilities which don't have other Tribuo dependencies. 19 | *20 | * The main class is {@link org.tribuo.util.Util} which has static methods for 21 | * working with arrays and sampling various distributions using an rng. 22 | */ 23 | package org.tribuo.util; -------------------------------------------------------------------------------- /Core/src/main/javadoc/overview.html: -------------------------------------------------------------------------------- 1 | 2 |
3 | 4 |string label = 1;
13 | * @return The label.
14 | */
15 | java.lang.String getLabel();
16 | /**
17 | * string label = 1;
18 | * @return The bytes for label.
19 | */
20 | com.google.protobuf.ByteString
21 | getLabelBytes();
22 | }
23 |
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1 | 1 0:-0.5 1:2.7 2:50 3:-1.3 5:9 6:86
2 | 1 0:-1 1:2.7 3:-1.3 5:-1.3 6:86
3 | 0 0:1 2:50 3:-1.3 5:2.3
4 | 1 1:2.7 2:25 3:-1.3 5:-1.3 6:86
5 | 0 0:5.5 1:2.7 2:70 3:-1.6 6:86
6 | 1 0:3.5 1:2.7 2:10 5:-1.3 6:86
7 | 0 1:2.7 2:50 3:-1.3 5:-5.3 6:86
8 | 0 0:5.5 1:2.7 3:-1.3 5:-1.3
9 | 1 0:1 1:2.7 3:-1.3 4:2 6:86
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1 |
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/Core/src/test/resources/org/tribuo/hash/hc-hasher-431.tribuo:
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1 | org.tribuo.hash.HashCodeHasher
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/Core/src/test/resources/org/tribuo/hash/md-hasher-431.tribuo:
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1 | #org.tribuo.hash.MessageDigestHasherE
2 | 8type.googleapis.com/tribuo.core.MessageDigestHasherProto
3 | SHA-256
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/Core/src/test/resources/org/tribuo/hash/mod-hasher-431.tribuo:
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1 | !org.tribuo.hash.ModHashCodeHasher<
2 | 6type.googleapis.com/tribuo.core.ModHashCodeHasherProtod
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/Data/src/main/java/org/tribuo/data/columnar/processors/feature/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides implementations of {@link org.tribuo.data.columnar.FeatureProcessor}.
19 | */
20 | package org.tribuo.data.columnar.processors.feature;
--------------------------------------------------------------------------------
/Data/src/main/java/org/tribuo/data/columnar/processors/field/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides implementations of {@link org.tribuo.data.columnar.FieldProcessor}.
19 | */
20 | package org.tribuo.data.columnar.processors.field;
--------------------------------------------------------------------------------
/Data/src/main/java/org/tribuo/data/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides classes for loading in data from disk, processing it into examples, and splitting datasets for
19 | * things like cross-validation and train-test splits.
20 | */
21 | package org.tribuo.data;
--------------------------------------------------------------------------------
/Data/src/main/java/org/tribuo/data/text/impl/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides implementations of text data processors.
19 | */
20 | package org.tribuo.data.text.impl;
--------------------------------------------------------------------------------
/Data/src/main/java/org/tribuo/data/text/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides interfaces for converting text inputs into {@link org.tribuo.Feature}s and {@link org.tribuo.Example}s.
19 | */
20 | package org.tribuo.data.text;
--------------------------------------------------------------------------------
/Data/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Data/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../THIRD_PARTY_LICENSES.txt
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-bom.csv:
--------------------------------------------------------------------------------
1 | A,B,C,D,RESPONSE
2 | 1,2,3,4,monkey
3 | 2,5,3,4,monkey
4 | 1,2,5,9,baboon
5 | 3,5,8,4,monkey
6 | 6,7,8,9,baboon
7 | 0,7,8,9,baboon
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-double-line-break.csv:
--------------------------------------------------------------------------------
1 | A,B,C,D,RESPONSE
2 | 1,2,3,4,monkey
3 | 2,5,3,4,monkey
4 | 1,2,5,9,baboon
5 |
6 | 3,5,8,4,monkey
7 | 6,7,8,9,baboon
8 | 0,7,8,9,baboon
9 |
10 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-missingoutput.csv:
--------------------------------------------------------------------------------
1 | A,B,C,D,R1,R2
2 | 1,2,3,4,TRUE,
3 | 6,7,8,9,TRUE,TRUE
4 | 6,7,8,9,,
5 | 2,5,3,4,TRUE,
6 | 1,2,5,9,,TRUE
7 | 0,2,5,9,,TRUE
8 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-multioutput-singlecolumn.csv:
--------------------------------------------------------------------------------
1 | A,B,C,D,Label
2 | 1,2,3,4,"R1"
3 | 6,7,8,9,"R1,R2"
4 | 6,7,8,9,
5 | 2,5,3,4,"R1"
6 | 1,2,5,9,"R2"
7 | 0,2,5,9,"R2"
8 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-multioutput.csv:
--------------------------------------------------------------------------------
1 | A,B,C,D,R1,R2
2 | 1,2,3,4,TRUE,FALSE
3 | 6,7,8,9,TRUE,TRUE
4 | 6,7,8,9,FALSE,FALSE
5 | 2,5,3,4,TRUE,FALSE
6 | 1,2,5,9,FALSE,TRUE
7 | 0,2,5,9,FALSE,TRUE
8 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-noheader.csv:
--------------------------------------------------------------------------------
1 | 1,2,3,4,monkey
2 | 2,5,3,4,monkey
3 | 1,2,5,9,baboon
4 | 3,5,8,4,monkey
5 | 6,7,8,9,baboon
6 | 0,7,8,9,baboon
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test-regexmapping.csv:
--------------------------------------------------------------------------------
1 | fooA,fooB,fooC,fooD,RESPONSE
2 | 1,2,3,4,monkey
3 | 2,5,3,4,monkey
4 | 1,2,5,9,baboon
5 | 3,5,8,4,monkey
6 | 6,7,8,9,baboon
7 | 0,7,8,9,baboon
8 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/test.csv:
--------------------------------------------------------------------------------
1 | A,B,C,D,RESPONSE
2 | 1,2,3,4,monkey
3 | 2,5,3,4,monkey
4 | 1,2,5,9,baboon
5 | 3,5,8,4,monkey
6 | 6,7,8,9,baboon
7 | 0,7,8,9,baboon
8 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/testQuote.csv:
--------------------------------------------------------------------------------
1 | "A","B","C","D","RESPONSE"
2 | "1","2","3","4","monkey"
3 | "2","5","3","4","monkey"
4 | "1","2","5","9","baboon"
5 | "3","5","8","4","monkey"
6 | "6","7","8","9","baboon"
7 | "0","7","8","9","baboon"
8 |
--------------------------------------------------------------------------------
/Data/src/test/resources/org/tribuo/data/csv/testQuote.tsv:
--------------------------------------------------------------------------------
1 | |A| |B| |C| |D| |RESPONSE|
2 | |1| |2| |3| |4| |monkey|
3 | |2| |5| |3| |4| |monkey|
4 | |1| |2| |5| |9| |baboon|
5 | |3| |5| |8| |4| |monkey|
6 | |6| |7| |8| |9| |baboon|
7 | |0| |7| |8| |9| |baboon|
8 |
--------------------------------------------------------------------------------
/Interop/Core/src/main/java/org/tribuo/interop/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * This package contains the abstract implementation of an external model
19 | * trained by something outside of Tribuo. It also contains provenance
20 | * classes for describing external models.
21 | */
22 | package org.tribuo.interop;
--------------------------------------------------------------------------------
/Interop/Core/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Interop/Core/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
--------------------------------------------------------------------------------
/Interop/ModelCard/src/test/resources/classificationSampleData.csv:
--------------------------------------------------------------------------------
1 | response, a, b, c, d
2 | a, 1, 2, 2, 3
3 | a, 4, 4, 5, 7
4 | b, 9, 0, 1, 2
5 | b, 2, 3, 5, 8
6 | b, 4, 4, 5, 7
7 | a, 9, 0, 1, 2
8 | b, 2, 3, 5, 8
9 | b, 2, 3, 5, 8
10 | a, 4, 4, 5, 7
11 | b, 2, 3, 5, 8
12 |
--------------------------------------------------------------------------------
/Interop/ModelCard/src/test/resources/externalModelPath.xgb:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/ModelCard/src/test/resources/externalModelPath.xgb
--------------------------------------------------------------------------------
/Interop/ModelCard/src/test/resources/multiClassificationSampleData.svm:
--------------------------------------------------------------------------------
1 | 1,3 1:0.034 2:0.555 3:-0.567
2 | 9,4 1:0.234 2:-0.655 3:-0.67
3 | 1,3 1:0.034 2:0.555 3:-0.567
4 | 9,4 1:0.234 2:-0.655 3:-0.67
5 | 1,3 1:0.034 2:0.555 3:-0.567
6 | 9,4 1:0.234 2:-0.655 3:-0.67
7 | 1,3 1:0.034 2:0.555 3:-0.567
8 | 9,4 1:0.234 2:-0.655 3:-0.67
9 | 1,3 1:0.034 2:0.555 3:-0.567
10 | 9,4 1:0.234 2:-0.655 3:-0.67
--------------------------------------------------------------------------------
/Interop/ModelCard/src/test/resources/regressionSampleData.csv:
--------------------------------------------------------------------------------
1 | response, a, b, c
2 | 1, 9, 3, 2
3 | 3, 3, 4, 5
4 | 2, 5, 6, 8
5 | 3, 2, 1, 1
6 | 2, 5, 6, 7
7 | 0, 1, 9, 1
8 | 2, 5, 6, 8
9 | 3, 2, 1, 1
10 | 1, 9, 3, 2
11 | 3, 3, 4, 5
--------------------------------------------------------------------------------
/Interop/OCI/src/main/java/org/tribuo/interop/oci/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Code for uploading models to Oracle Cloud Infrastructure Data Science, and also for scoring models deployed
19 | * in Oracle Cloud Infrastructure Data Science.
20 | */
21 | package org.tribuo.interop.oci;
--------------------------------------------------------------------------------
/Interop/OCI/src/main/java/org/tribuo/interop/oci/protos/OCILabelConverterProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-oci.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.interop.oci.protos;
6 |
7 | public interface OCILabelConverterProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.interop.oci.OCILabelConverterProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * bool generates_probabilities = 1;
13 | * @return The generatesProbabilities.
14 | */
15 | boolean getGeneratesProbabilities();
16 | }
17 |
--------------------------------------------------------------------------------
/Interop/OCI/src/main/java/org/tribuo/interop/oci/protos/OCIMultiLabelConverterProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-oci.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.interop.oci.protos;
6 |
7 | public interface OCIMultiLabelConverterProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.interop.oci.OCIMultiLabelConverterProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * bool generates_probabilities = 1;
13 | * @return The generatesProbabilities.
14 | */
15 | boolean getGeneratesProbabilities();
16 |
17 | /**
18 | * double threshold = 2;
19 | * @return The threshold.
20 | */
21 | double getThreshold();
22 | }
23 |
--------------------------------------------------------------------------------
/Interop/OCI/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Interop/OCI/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
--------------------------------------------------------------------------------
/Interop/OCI/src/main/resources/org/tribuo/interop/oci/runtime.yaml:
--------------------------------------------------------------------------------
1 | # Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
2 | # This software is available under the Apache License 2.0 as shown at http://www.apache.org/licenses/LICENSE-2.0.
3 | MODEL_ARTIFACT_VERSION: '3.0'
4 | MODEL_DEPLOYMENT:
5 | INFERENCE_CONDA_ENV:
6 | INFERENCE_ENV_SLUG: onnx17_p37_cpu_v1
7 | INFERENCE_ENV_TYPE: data_science
8 | INFERENCE_ENV_PATH: oci://service-conda-packs@id19sfcrra6z/service_pack/cpu/Onnx for CPU Python 3.7/1.0/onnx17_p37_cpu_v1
9 | INFERENCE_PYTHON_VERSION: '3.7'
--------------------------------------------------------------------------------
/Interop/OCI/src/test/resources/org/tribuo/interop/oci/iris-lr-model.onnx:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/OCI/src/test/resources/org/tribuo/interop/oci/iris-lr-model.onnx
--------------------------------------------------------------------------------
/Interop/OCI/src/test/resources/org/tribuo/interop/oci/label-431.tribuo:
--------------------------------------------------------------------------------
1 | (org.tribuo.interop.oci.OCILabelConverterC
2 | =type.googleapis.com/tribuo.interop.oci.OCILabelConverterProto
--------------------------------------------------------------------------------
/Interop/OCI/src/test/resources/org/tribuo/interop/oci/multilabel-431.tribuo:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/OCI/src/test/resources/org/tribuo/interop/oci/multilabel-431.tribuo
--------------------------------------------------------------------------------
/Interop/OCI/src/test/resources/org/tribuo/interop/oci/regressor-431.tribuo:
--------------------------------------------------------------------------------
1 | ,org.tribuo.interop.oci.OCIRegressorConverter
--------------------------------------------------------------------------------
/Interop/ONNX/src/main/java/org/tribuo/interop/onnx/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015, 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * This package contains a Tribuo wrapper around ONNX Runtime.
19 | *
20 | * ONNX Runtime allows the deployment of models trained in scikit-learn, pytorch and other packages
21 | * without requiring them to be present at runtime.
22 | */
23 | package org.tribuo.interop.onnx;
--------------------------------------------------------------------------------
/Interop/ONNX/src/main/java/org/tribuo/interop/onnx/protos/ImageTransformerProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-onnx.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.interop.onnx.protos;
6 |
7 | public interface ImageTransformerProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.interop.onnx.ImageTransformerProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * int32 width = 1;
13 | * @return The width.
14 | */
15 | int getWidth();
16 |
17 | /**
18 | * int32 height = 2;
19 | * @return The height.
20 | */
21 | int getHeight();
22 |
23 | /**
24 | * int32 channels = 3;
25 | * @return The channels.
26 | */
27 | int getChannels();
28 | }
29 |
--------------------------------------------------------------------------------
/Interop/ONNX/src/main/java/org/tribuo/interop/onnx/protos/LabelTransformerProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-onnx.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.interop.onnx.protos;
6 |
7 | public interface LabelTransformerProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.interop.onnx.LabelTransformerProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * bool generates_probabilities = 1;
13 | * @return The generatesProbabilities.
14 | */
15 | boolean getGeneratesProbabilities();
16 | }
17 |
--------------------------------------------------------------------------------
/Interop/ONNX/src/main/java/org/tribuo/interop/onnx/protos/MultiLabelTransformerProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-onnx.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.interop.onnx.protos;
6 |
7 | public interface MultiLabelTransformerProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.interop.onnx.MultiLabelTransformerProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * bool generates_probabilities = 1;
13 | * @return The generatesProbabilities.
14 | */
15 | boolean getGeneratesProbabilities();
16 |
17 | /**
18 | * double threshold = 2;
19 | * @return The threshold.
20 | */
21 | double getThreshold();
22 | }
23 |
--------------------------------------------------------------------------------
/Interop/ONNX/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Interop/ONNX/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/cnn_mnist.onnx:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/cnn_mnist.onnx
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/dense-431.tribuo:
--------------------------------------------------------------------------------
1 | (org.tribuo.interop.onnx.DenseTransformer
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/extractors/bert-base-cased-tokenizer.json.README:
--------------------------------------------------------------------------------
1 | The bert-base-cased-tokenizer.json file is licensed under Apache 2.0 and copyright Huggingface.
2 | It is from the Huggingface Transformers library and represents a trained Wordpiece tokenizer
3 | which is based on the one released by Google with the original bert-base-cased model.
4 |
5 | More details on the bert-base-cased model and tokenizer are available here - https://huggingface.co/bert-base-cased
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/extractors/tinybert.onnx:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/extractors/tinybert.onnx
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/image-431.tribuo:
--------------------------------------------------------------------------------
1 | (org.tribuo.interop.onnx.ImageTransformerG
2 | =type.googleapis.com/tribuo.interop.onnx.ImageTransformerProto@@
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/label-431.tribuo:
--------------------------------------------------------------------------------
1 | (org.tribuo.interop.onnx.LabelTransformerC
2 | =type.googleapis.com/tribuo.interop.onnx.LabelTransformerProto
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/lovo-431.tribuo:
--------------------------------------------------------------------------------
1 | /org.tribuo.interop.onnx.LabelOneVOneTransformer
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/lr_mnist.onnx:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/lr_mnist.onnx
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/multilabel-431.tribuo:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/multilabel-431.tribuo
--------------------------------------------------------------------------------
/Interop/ONNX/src/test/resources/org/tribuo/interop/onnx/regressor-431.tribuo:
--------------------------------------------------------------------------------
1 | ,org.tribuo.interop.onnx.RegressorTransformer
--------------------------------------------------------------------------------
/Interop/Tensorflow/configs/cnn-mnist-v0.3.1.pb:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Interop/Tensorflow/configs/cnn-mnist-v0.3.1.pb
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/main/java/org/tribuo/interop/tensorflow/example/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021 Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Example architectures for use with Tribuo's TF interface.
19 | *
20 | * Also used to provide architectures for the unit tests.
21 | */
22 | package org.tribuo.interop.tensorflow.example;
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/main/java/org/tribuo/interop/tensorflow/protos/DenseFeatureConverterProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-tensorflow.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.interop.tensorflow.protos;
6 |
7 | public interface DenseFeatureConverterProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.interop.tensorflow.DenseFeatureConverterProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * string input_name = 1;
13 | * @return The inputName.
14 | */
15 | java.lang.String getInputName();
16 | /**
17 | * string input_name = 1;
18 | * @return The bytes for inputName.
19 | */
20 | com.google.protobuf.ByteString
21 | getInputNameBytes();
22 | }
23 |
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/test/resources/org/tribuo/interop/tensorflow/dense-431.tribuo:
--------------------------------------------------------------------------------
1 | 3org.tribuo.interop.tensorflow.DenseFeatureConverterQ
2 | Htype.googleapis.com/tribuo.interop.tensorflow.DenseFeatureConverterProto
3 | foo
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/test/resources/org/tribuo/interop/tensorflow/image-431.tribuo:
--------------------------------------------------------------------------------
1 | ,org.tribuo.interop.tensorflow.ImageConverterP
2 | Atype.googleapis.com/tribuo.interop.tensorflow.ImageConverterProto
3 | foo@@
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/test/resources/org/tribuo/interop/tensorflow/label-431.tribuo:
--------------------------------------------------------------------------------
1 | ,org.tribuo.interop.tensorflow.LabelConverter
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/test/resources/org/tribuo/interop/tensorflow/multilabel-431.tribuo:
--------------------------------------------------------------------------------
1 | 1org.tribuo.interop.tensorflow.MultiLabelConverter
--------------------------------------------------------------------------------
/Interop/Tensorflow/src/test/resources/org/tribuo/interop/tensorflow/regressor-431.tribuo:
--------------------------------------------------------------------------------
1 | 0org.tribuo.interop.tensorflow.RegressorConverter
--------------------------------------------------------------------------------
/Json/src/main/java/org/tribuo/json/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides interop with JSON formatted data, along with tools for interacting with JSON provenance objects.
19 | */
20 | package org.tribuo.json;
--------------------------------------------------------------------------------
/Json/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../LICENSE.txt
--------------------------------------------------------------------------------
/Json/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../THIRD_PARTY_LICENSES.txt
--------------------------------------------------------------------------------
/Json/src/test/resources/org/tribuo/json/empty.json:
--------------------------------------------------------------------------------
1 | [ ]
2 |
3 |
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/Math/src/main/java/org/tribuo/math/distance/package-info.java:
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1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * An interface for distance computations between two {@link org.tribuo.math.la.SGDVector} instances
19 | * along with some standard implementations.
20 | */
21 | package org.tribuo.math.distance;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/distributions/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * A package of statistical distributions.
19 | */
20 | package org.tribuo.math.distributions;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/kernel/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a {@link org.tribuo.math.kernel.Kernel} interface for Mercer kernels, along with implementations of standard kernels.
19 | */
20 | package org.tribuo.math.kernel;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/neighbour/bruteforce/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a brute-force nearest neighbour query implementation.
19 | */
20 | package org.tribuo.math.neighbour.bruteforce;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/neighbour/kdtree/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a k-d tree nearest neighbour query implementation.
19 | */
20 | package org.tribuo.math.neighbour.kdtree;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/neighbour/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides nearest neighbour query functionality.
19 | */
20 | package org.tribuo.math.neighbour;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/onnx/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2022, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Utilities for converting Tribuo math objects into ONNX representations.
19 | */
20 | package org.tribuo.math.onnx;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/optimisers/util/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides some utility tensors for use in gradient optimisers.
19 | */
20 | package org.tribuo.math.optimisers.util;
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/protos/LinearParametersProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-math-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.math.protos;
6 |
7 | public interface LinearParametersProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.math.impl.LinearParametersProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * .tribuo.math.TensorProto weightMatrix = 1;
13 | * @return Whether the weightMatrix field is set.
14 | */
15 | boolean hasWeightMatrix();
16 | /**
17 | * .tribuo.math.TensorProto weightMatrix = 1;
18 | * @return The weightMatrix.
19 | */
20 | org.tribuo.math.protos.TensorProto getWeightMatrix();
21 | /**
22 | * .tribuo.math.TensorProto weightMatrix = 1;
23 | */
24 | org.tribuo.math.protos.TensorProtoOrBuilder getWeightMatrixOrBuilder();
25 | }
26 |
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/Math/src/main/java/org/tribuo/math/protos/PolynomialKernelProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-math-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.math.protos;
6 |
7 | public interface PolynomialKernelProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.math.impl.PolynomialKernelProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * double gamma = 1;
13 | * @return The gamma.
14 | */
15 | double getGamma();
16 |
17 | /**
18 | * double intercept = 2;
19 | * @return The intercept.
20 | */
21 | double getIntercept();
22 |
23 | /**
24 | * double degree = 3;
25 | * @return The degree.
26 | */
27 | double getDegree();
28 | }
29 |
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/Math/src/main/java/org/tribuo/math/protos/RBFKernelProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-math-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.math.protos;
6 |
7 | public interface RBFKernelProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.math.impl.RBFKernelProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * double gamma = 1;
13 | * @return The gamma.
14 | */
15 | double getGamma();
16 | }
17 |
--------------------------------------------------------------------------------
/Math/src/main/java/org/tribuo/math/protos/SigmoidKernelProtoOrBuilder.java:
--------------------------------------------------------------------------------
1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-math-impl.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.math.protos;
6 |
7 | public interface SigmoidKernelProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.math.impl.SigmoidKernelProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * double gamma = 1;
13 | * @return The gamma.
14 | */
15 | double getGamma();
16 |
17 | /**
18 | * double intercept = 2;
19 | * @return The intercept.
20 | */
21 | double getIntercept();
22 | }
23 |
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/Math/src/main/resources/LICENSE.txt:
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1 | ../../../../LICENSE.txt
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/Math/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../THIRD_PARTY_LICENSES.txt
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/Math/src/test/resources/org/tribuo/math/distance/cosine-distance-431.tribuo:
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1 | 'org.tribuo.math.distance.CosineDistance
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/Math/src/test/resources/org/tribuo/math/distance/l1-distance-431.tribuo:
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1 | #org.tribuo.math.distance.L1Distance
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/Math/src/test/resources/org/tribuo/math/distance/l2-distance-431.tribuo:
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1 | #org.tribuo.math.distance.L2Distance
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/Math/src/test/resources/org/tribuo/math/la/dense-matrix-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/la/dense-vector-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/la/densesparse-matrix-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/la/sparse-vector-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/linear-kernel-431.tribuo:
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1 | org.tribuo.math.kernel.Linear
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/Math/src/test/resources/org/tribuo/math/neighbour/brute-factory-431.tribuo:
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1 | @org.tribuo.math.neighbour.bruteforce.NeighboursBruteForceFactoryh
2 | ;type.googleapis.com/tribuo.math.impl.BruteForceFactoryProto)%#org.tribuo.math.distance.L2Distance
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/Math/src/test/resources/org/tribuo/math/neighbour/kdtree-factory-431.tribuo:
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1 | .org.tribuo.math.neighbour.kdtree.KDTreeFactoryd
2 | 7type.googleapis.com/tribuo.math.impl.KDTreeFactoryProto)%#org.tribuo.math.distance.L2Distance
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/Math/src/test/resources/org/tribuo/math/optimisers/util/shrinking-matrix-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/optimisers/util/shrinking-vector-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/poly-kernel-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/rbf-kernel-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/sigmoid-kernel-431.tribuo:
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/Math/src/test/resources/org/tribuo/math/util/exp-normalizer-431.tribuo:
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1 | "org.tribuo.math.util.ExpNormalizer
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/Math/src/test/resources/org/tribuo/math/util/heap-merger-431.tribuo:
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1 | org.tribuo.math.util.HeapMerger
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/Math/src/test/resources/org/tribuo/math/util/matrix-merger-431.tribuo:
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1 | %org.tribuo.math.util.MatrixHeapMerger
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/Math/src/test/resources/org/tribuo/math/util/noop-normalizer-431.tribuo:
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1 | #org.tribuo.math.util.NoopNormalizer
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/Math/src/test/resources/org/tribuo/math/util/normalizer-431.tribuo:
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1 | org.tribuo.math.util.Normalizer
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/Math/src/test/resources/org/tribuo/math/util/sigmoid-normalizer-431.tribuo:
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1 | &org.tribuo.math.util.SigmoidNormalizer
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/MultiLabel/Core/src/main/java/org/tribuo/multilabel/ensemble/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a multi-label ensemble combiner that performs a (possibly
19 | * weighted) majority vote among each label independently, along with an
20 | * implementation of classifier chain ensembles.
21 | */
22 | package org.tribuo.multilabel.ensemble;
--------------------------------------------------------------------------------
/MultiLabel/Core/src/main/java/org/tribuo/multilabel/example/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides a multi-label data generator for testing implementations and a
19 | * configurable data source suitable for demos and tests.
20 | */
21 | package org.tribuo.multilabel.example;
--------------------------------------------------------------------------------
/MultiLabel/Core/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
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/MultiLabel/Core/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/baseline/cc-431.tribuo:
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/baseline/iml-431.tribuo:
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/combiner-multilabel-431.tribuo:
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1 | 7org.tribuo.multilabel.ensemble.MultiLabelVotingCombiner
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/factory-multilabel-431.tribuo:
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1 | 'org.tribuo.multilabel.MultiLabelFactory
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/immutableinfo-multilabel-431.tribuo:
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1 | -org.tribuo.multilabel.ImmutableMultiLabelInfob
2 | Btype.googleapis.com/tribuo.multilabel.ImmutableMultiLabelInfoProto
3 | A
4 | B
5 | C
6 | ONE (
7 |
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/multilabel-431.tribuo:
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/MultiLabel/Core/src/test/resources/org/tribuo/multilabel/mutableinfo-multilabel-431.tribuo:
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1 | +org.tribuo.multilabel.MutableMultiLabelInfo\
2 | @type.googleapis.com/tribuo.multilabel.MutableMultiLabelInfoProto
3 | A
4 | B
5 | C
6 | ONE
7 |
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/MultiLabel/SGD/src/main/java/org/tribuo/multilabel/sgd/fm/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2021, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of a multi-label classification factorization machine model using Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.multilabel.sgd.fm;
--------------------------------------------------------------------------------
/MultiLabel/SGD/src/main/java/org/tribuo/multilabel/sgd/linear/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides an implementation of a multi-label classification linear model using Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.multilabel.sgd.linear;
--------------------------------------------------------------------------------
/MultiLabel/SGD/src/main/java/org/tribuo/multilabel/sgd/objectives/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides multi-label classification loss functions for Stochastic Gradient Descent.
19 | */
20 | package org.tribuo.multilabel.sgd.objectives;
--------------------------------------------------------------------------------
/MultiLabel/SGD/src/main/java/org/tribuo/multilabel/sgd/package-info.java:
--------------------------------------------------------------------------------
1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides infrastructure for Stochastic Gradient Descent for multi-label classification problems.
19 | */
20 | package org.tribuo.multilabel.sgd;
--------------------------------------------------------------------------------
/MultiLabel/SGD/src/main/resources/LICENSE.txt:
--------------------------------------------------------------------------------
1 | ../../../../../LICENSE.txt
--------------------------------------------------------------------------------
/MultiLabel/SGD/src/main/resources/THIRD_PARTY_LICENSES.txt:
--------------------------------------------------------------------------------
1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/MultiLabel/SGD/src/test/resources/org/tribuo/multilabel/sgd/fm/fm-ml-431.tribuo:
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/MultiLabel/SGD/src/test/resources/org/tribuo/multilabel/sgd/linear/lin-ml-431.tribuo:
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/Regression/Core/src/main/java/org/tribuo/regression/baseline/package-info.java:
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1 | /*
2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved.
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | /**
18 | * Provides simple baseline regression predictors.
19 | *
20 | * If you can't beat these baselines then your ML system isn't working. 21 | *
22 | */ 23 | package org.tribuo.regression.baseline; -------------------------------------------------------------------------------- /Regression/Core/src/main/java/org/tribuo/regression/ensemble/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides {@link org.tribuo.ensemble.EnsembleCombiner} implementations 19 | * for working with multi-output regression problems. 20 | */ 21 | package org.tribuo.regression.ensemble; -------------------------------------------------------------------------------- /Regression/Core/src/main/java/org/tribuo/regression/example/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides some example regression data generators for testing implementations. 19 | */ 20 | package org.tribuo.regression.example; -------------------------------------------------------------------------------- /Regression/Core/src/main/java/org/tribuo/regression/impl/package-info.java: -------------------------------------------------------------------------------- 1 | /* 2 | * Copyright (c) 2015-2020, Oracle and/or its affiliates. All rights reserved. 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | /** 18 | * Provides skeletal implementations of {@link org.tribuo.regression.Regressor} 19 | * {@link org.tribuo.Trainer} that can wrap a single 20 | * dimension trainer/model and produce one prediction per dimension independently. 21 | */ 22 | package org.tribuo.regression.impl; -------------------------------------------------------------------------------- /Regression/Core/src/main/java/org/tribuo/regression/protos/DimensionTupleProtoOrBuilder.java: -------------------------------------------------------------------------------- 1 | // Generated by the protocol buffer compiler. DO NOT EDIT! 2 | // source: tribuo-regression-core.proto 3 | 4 | // Protobuf Java Version: 3.25.6 5 | package org.tribuo.regression.protos; 6 | 7 | public interface DimensionTupleProtoOrBuilder extends 8 | // @@protoc_insertion_point(interface_extends:tribuo.regression.DimensionTupleProto) 9 | com.google.protobuf.MessageOrBuilder { 10 | 11 | /** 12 | *string name = 1;
13 | * @return The name.
14 | */
15 | java.lang.String getName();
16 | /**
17 | * string name = 1;
18 | * @return The bytes for name.
19 | */
20 | com.google.protobuf.ByteString
21 | getNameBytes();
22 |
23 | /**
24 | * double value = 2;
25 | * @return The value.
26 | */
27 | double getValue();
28 |
29 | /**
30 | * double variance = 3;
31 | * @return The variance.
32 | */
33 | double getVariance();
34 | }
35 |
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/Regression/Core/src/main/java/org/tribuo/regression/protos/RegressionFactoryProtoOrBuilder.java:
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1 | // Generated by the protocol buffer compiler. DO NOT EDIT!
2 | // source: tribuo-regression-core.proto
3 |
4 | // Protobuf Java Version: 3.25.6
5 | package org.tribuo.regression.protos;
6 |
7 | public interface RegressionFactoryProtoOrBuilder extends
8 | // @@protoc_insertion_point(interface_extends:tribuo.regression.RegressionFactoryProto)
9 | com.google.protobuf.MessageOrBuilder {
10 |
11 | /**
12 | * string splitChar = 1;
13 | * @return The splitChar.
14 | */
15 | java.lang.String getSplitChar();
16 | /**
17 | * string splitChar = 1;
18 | * @return The bytes for splitChar.
19 | */
20 | com.google.protobuf.ByteString
21 | getSplitCharBytes();
22 | }
23 |
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/Regression/Core/src/main/resources/LICENSE.txt:
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1 | ../../../../../LICENSE.txt
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/Regression/Core/src/main/resources/THIRD_PARTY_LICENSES.txt:
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1 | ../../../../../THIRD_PARTY_LICENSES.txt
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/Regression/Core/src/test/resources/org/tribuo/regression/baseline/dummyreg-431.tribuo:
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https://raw.githubusercontent.com/oracle/tribuo/64d7ec12d5094ee6a327de691a21451d07bc3bb5/Regression/Core/src/test/resources/org/tribuo/regression/baseline/dummyreg-431.tribuo
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/Regression/Core/src/test/resources/org/tribuo/regression/combiner-regression-431.tribuo:
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1 | 0org.tribuo.regression.ensemble.AveragingCombiner
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/Regression/Core/src/test/resources/org/tribuo/regression/dimension-431.tribuo:
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/Regression/Core/src/test/resources/org/tribuo/regression/factory-regression-431.tribuo:
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1 | 'org.tribuo.regression.RegressionFactoryC
2 |