├── .Rbuildignore ├── .gitignore ├── .travis.yml ├── DESCRIPTION ├── NAMESPACE ├── NEWS ├── R ├── DAG_node_R6.R ├── action_node_indexing.R ├── distributions.R ├── interface.r ├── network.R ├── network_distributions.R ├── node.R ├── parserfunctions_R6.r ├── simcausal-package.r ├── simcausal.r ├── simulation.r ├── targetparam.r └── zzz.R ├── README.md ├── cran-comments.md ├── inst └── CITATION ├── man ├── A.Rd ├── DAG.empty.Rd ├── DF.to.long.Rd ├── DF.to.longDT.Rd ├── Define_sVar.Rd ├── N.Rd ├── NetInd.to.sparseAdjMat.Rd ├── NetIndClass.Rd ├── add.action.Rd ├── add.nodes.Rd ├── distr.list.Rd ├── doLTCF.Rd ├── eval.target.Rd ├── igraph.to.sparseAdjMat.Rd ├── net.list.Rd ├── network.Rd ├── node.Rd ├── parents.Rd ├── plotDAG.Rd ├── plotSurvEst.Rd ├── print.DAG.Rd ├── print.DAG.action.Rd ├── print.DAG.node.Rd ├── rbern.Rd ├── rcat.b1.Rd ├── rcat.factor.Rd ├── rconst.Rd ├── rdistr.template.Rd ├── rnet.SmWorld.Rd ├── rnet.gnm.Rd ├── rnet.gnp.Rd ├── set.DAG.Rd ├── set.targetE.Rd ├── set.targetMSM.Rd ├── sim.Rd ├── simcausal.Rd ├── simfull.Rd ├── simobs.Rd ├── sparseAdjMat.to.NetInd.Rd ├── sparseAdjMat.to.igraph.Rd ├── vecfun.add.Rd ├── vecfun.all.print.Rd ├── vecfun.print.Rd ├── vecfun.remove.Rd └── vecfun.reset.Rd ├── tests ├── RUnit │ ├── RUnit_tests_00.R │ ├── RUnit_tests_00_wide_to_long.R │ ├── RUnit_tests_01_nets.R │ ├── RUnit_tests_02_MV.R │ └── RUnit_tests_03_NSE_bug.R ├── examples │ ├── MSM.examples.R │ ├── add.action.R │ ├── example.simnets.R │ ├── set.DAG.R │ ├── set.targetE.examples.R │ └── sim.impute.examples12.R └── test-all.R └── vignettes ├── R-Pckgs.bib ├── SimCausal_2014.bib ├── SimCausal_Networks_2016.bib ├── mystyles.sty ├── psi.n.mat.rda ├── simcausal_vignette.Rnw └── vignette_dat ├── repstudy1_psi0.t0.MSM.Rdata ├── repstudy1_psi0.t0.NP.Rdata ├── restabSc1_all_1Ksims.Rdata ├── restabSc3_all_1Ksims.Rdata ├── restabwLefSc1_all_1Ksims.Rdata ├── restabwLefSc3_all_1Ksims.Rdata ├── sim50K.stratQg.notrunc.g.Rdata ├── sim50K.stratQg.notrunc.missg.Rdata 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