├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── pkgdown.yaml │ └── test-coverage.yaml ├── .gitignore ├── DESCRIPTION ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── AllGenerics.R ├── concordex-internals.R ├── concordex.R ├── utils-labels.R └── utils.R ├── README.Rmd ├── README.md ├── _pkgdown.yml ├── codecov.yml ├── dev └── config_attachment.yaml ├── man ├── calculateConcordex.Rd └── figures │ └── README-plot-shr-1.png ├── tests ├── testthat.R └── testthat │ ├── test-concordex.R │ └── test-label-utils.R └── vignettes ├── .gitignore ├── concordex-nonspatial.Rmd ├── overview.Rmd └── ref.bib /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pachterlab/concordexR/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | 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