├── .gitignore ├── .gitmodules ├── AUTHORS ├── LICENSE ├── README.md ├── hipBone.cpp ├── hipBone.hpp ├── hipBone_poly ├── include ├── comm.hpp ├── core.hpp ├── linAlg.hpp ├── linearSolver.hpp ├── memory.hpp ├── mesh.hpp ├── ogs.hpp ├── ogs │ ├── ogsBase.hpp │ ├── ogsExchange.hpp │ ├── ogsOperator.hpp │ └── ogsUtils.hpp ├── parameters.hpp ├── platform.hpp ├── primitives.hpp ├── settings.hpp ├── solver.hpp ├── timer.hpp ├── types.h └── utils.hpp ├── json ├── hipBoneAx.json ├── linAlg.json ├── linearSolver.json └── ogs.json ├── libs ├── core │ ├── comm.cpp │ ├── exception.cpp │ ├── linAlg.cpp │ ├── linAlgSetup.cpp │ ├── linearSolverCG.cpp │ ├── matrixEig.cpp │ ├── matrixInverse.cpp │ ├── matrixRightSolve.cpp │ ├── memory.cpp │ ├── okl │ │ ├── linAlgAXPY.okl │ │ ├── linAlgInnerProd.okl │ │ ├── linAlgNorm2.okl │ │ ├── linAlgSet.okl │ │ └── linearSolverUpdateCG.okl │ ├── parameters.cpp │ ├── platformBuildKernel.cpp │ ├── platformDeviceConfig.cpp │ ├── platformProperties.cpp │ ├── platformSettings.cpp │ ├── rankDecomp.cpp │ ├── settings.cpp │ └── timer.cpp ├── makefile ├── mesh │ ├── mesh.cpp │ ├── meshBasis1D.cpp │ ├── meshBasisHex3D.cpp │ ├── meshConnect.cpp │ ├── meshConnectFaceNodes.cpp │ ├── meshConnectFaceVertices.cpp │ ├── meshConnectNodes.cpp │ ├── meshGatherScatterSetup.cpp │ ├── meshGeometricFactors.cpp │ ├── meshHaloSetup.cpp │ ├── meshOccaSetup.cpp │ ├── meshPhysicalNodes.cpp │ ├── meshReferenceNodes.cpp │ ├── meshSettings.cpp │ └── meshSetupBox.cpp ├── ogs │ ├── ogs.cpp │ ├── ogsAllToAll.cpp │ ├── ogsAuto.cpp │ ├── ogsCrystalRouter.cpp │ ├── ogsHalo.cpp │ ├── ogsOperator.cpp │ ├── ogsPairwise.cpp │ ├── ogsSetup.cpp │ ├── ogsUtils.cpp │ └── okl │ │ └── ogsKernels.okl └── primitives │ ├── adjacentDifference.cpp │ ├── count.cpp │ ├── numeric.cpp │ ├── random.cpp │ ├── reduce.cpp │ ├── runLengthEncode.cpp │ ├── scan.cpp │ ├── select.cpp │ ├── sort.cpp │ └── transform.cpp ├── make.top ├── makefile ├── okl ├── hipBoneAx.okl └── hipBoneRhs.okl ├── run.sh 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