├── .Rbuildignore ├── .Rprofile ├── .github ├── .gitignore └── workflows │ ├── checks.yml │ ├── pkgdown.yaml │ └── tests.yml ├── .gitignore ├── .travis.yml ├── DESCRIPTION ├── Makefile ├── NAMESPACE ├── NEWS.md ├── R ├── AnalyseIf.R ├── Attach.R ├── Bradley1978.R ├── Design.R ├── GenerateIf.R ├── PBA.R ├── RobbinsMonro.R ├── SFA.R ├── Serlin2000.R ├── SimAnova.R ├── SimBoot.R ├── SimCheck.R ├── SimClean.R ├── SimCollect.R ├── SimDesign.R ├── SimExtract.R ├── SimFunctions.R ├── SimResults.R ├── SimShiny.R ├── SimSolve.R ├── addMissing.R ├── analysis.R ├── bootPredict.R ├── functions.R ├── getArrayID.R ├── manageMessages.R ├── manageWarnings.R ├── notifications.R ├── rbind.SimDesign.R ├── reSummarise.R ├── rejectionSampling.R ├── rgenerate.R ├── rtruncate.R ├── runArraySimulation.R ├── runSimulation.R ├── summary_functions.R ├── util.R └── zzz.R ├── README.md ├── SimDesign-logo.png ├── SimDesign.Rproj ├── _pkgdown.yml ├── data ├── BF_sim.RData └── BF_sim_alternative.RData ├── dev ├── brms.slurm ├── brms_example.R └── brms_precompile.R ├── inst └── CITATION ├── man ├── Analyse.Rd ├── AnalyseIf.Rd ├── Attach.Rd ├── BF_sim.Rd ├── BF_sim_alternative.Rd ├── Bradley1978.Rd ├── CC.Rd ├── ECR.Rd ├── EDR.Rd ├── Generate.Rd ├── GenerateIf.Rd ├── IRMSE.Rd ├── MAE.Rd ├── MSRSE.Rd ├── PBA.Rd ├── RAB.Rd ├── RD.Rd ├── RE.Rd ├── RMSE.Rd ├── RSE.Rd ├── RobbinsMonro.Rd ├── SFA.Rd ├── Serlin2000.Rd ├── SimAnova.Rd ├── SimCheck.Rd ├── SimClean.Rd ├── SimCollect.Rd ├── SimDesign.Rd ├── SimExtract.Rd ├── SimFunctions.Rd ├── SimResults.Rd ├── SimShiny.Rd ├── SimSolve.Rd ├── Summarise.Rd ├── addMissing.Rd ├── bias.Rd ├── bootPredict.Rd ├── clusterSetRNGSubStream.Rd ├── colVars.Rd ├── createDesign.Rd ├── expandDesign.Rd ├── expandReplications.Rd ├── genSeeds.Rd ├── getArrayID.Rd ├── listAvailableNotifiers.Rd ├── manageMessages.Rd ├── manageWarnings.Rd ├── nc.Rd ├── new_PushbulletNotifier.Rd ├── new_TelegramNotifier.Rd ├── notify.PushbulletNotifier.Rd ├── notify.Rd ├── 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