├── .all-contributorsrc ├── .autorc ├── .circleci └── config.yml ├── .coveragerc ├── .gitattributes ├── .github ├── ISSUE_TEMPLATE │ ├── ISSUE_TEMPLATE_BUGS.md │ ├── ISSUE_TEMPLATE_DISCUSSION.md │ ├── ISSUE_TEMPLATE_FEATURE_REQUEST.md │ ├── ISSUE_TEMPLATE_GENERAL.md │ └── ISSUE_TEMPLATE_MEETING.md ├── PULL_REQUEST_TEMPLATE.md ├── config.yml ├── dependabot.yml ├── labeler.yml └── workflows │ ├── auto-author-assign.yml │ ├── auto-label.yml │ ├── auto-release.yml │ ├── codespell.yml │ └── python-publish.yml ├── .gitignore ├── .mailmap ├── .pre-commit-config.yaml ├── .readthedocs.yml ├── .requires.yml ├── .zenodo.json ├── CHANGELOG.md ├── LICENSE ├── MANIFEST.in ├── Makefile ├── README.md ├── codecov.yml ├── docs ├── Makefile ├── _static │ ├── favicon.txt │ ├── favicon │ │ ├── android-icon-144x144.png │ │ ├── android-icon-192x192.png │ │ ├── android-icon-36x36.png │ │ ├── android-icon-48x48.png │ │ ├── android-icon-72x72.png │ │ ├── android-icon-96x96.png │ │ ├── apple-icon-114x114.png │ │ ├── apple-icon-120x120.png │ │ ├── apple-icon-144x144.png │ │ ├── apple-icon-152x152.png │ │ ├── apple-icon-180x180.png │ │ ├── apple-icon-57x57.png │ │ ├── apple-icon-60x60.png │ │ ├── apple-icon-72x72.png │ │ ├── apple-icon-76x76.png │ │ ├── apple-icon-precomposed.png │ │ ├── apple-icon.png │ │ ├── browserconfig.xml │ │ ├── favicon-16x16.png │ │ ├── favicon-32x32.png │ │ ├── favicon-96x96.png │ │ ├── favicon.ico │ │ ├── manifest.json │ │ ├── ms-icon-144x144.png │ │ ├── ms-icon-150x150.png │ │ ├── ms-icon-310x310.png │ │ ├── ms-icon-70x70.png │ │ ├── phys2bids_onlyBrain.jpg │ │ └── phys2bids_onlyBrain.png │ ├── phys2bids_card.jpg │ ├── phys2bids_logo1280×640.png │ ├── phys2bids_logo2000x400.png │ ├── phys2bids_logo2_1280×640.png │ ├── phys2bids_logo_1280x649.png │ ├── phys2bids_logo_2000x400.png │ ├── phys2bids_negativeReadTheDocs_500x150.png │ ├── physiopy_logo_1280x640.png │ ├── physiopy_logo_small.png │ ├── physiopy_negativeReadTheDocs_500x150.png │ ├── theme_overrides.css │ ├── tutorial_file.png │ ├── tutorial_file_trigger_time.png │ ├── tutorial_file_v2_trigger_time_Tmissing.png │ └── tutorial_header.png ├── _templates │ ├── class.rst │ └── function.rst ├── api.rst ├── bestpractice.rst ├── bids.rst ├── cli.rst ├── conduct.rst ├── conf.py ├── contributing.rst ├── contributorfile.rst ├── heuristic.rst ├── howto.rst ├── index.rst ├── installation.rst └── license.rst ├── phys2bids ├── __init__.py ├── _version.py ├── bids.py ├── cli │ ├── __init__.py │ └── run.py ├── due.py ├── heuristics │ ├── heur_euskalibur.py │ ├── heur_test_acq.py │ ├── heur_test_multifreq.py │ ├── heur_tutorial.py │ └── participant.yml ├── io.py ├── phys2bids.py ├── physio_obj.py ├── slice4phys.py ├── tests │ ├── __init__.py │ ├── conftest.py │ ├── data │ │ ├── README.md │ │ └── tutorial_file_INFO.json │ ├── test_bids.py │ ├── test_integration.py │ ├── test_io.py │ ├── test_phys2bids.py │ ├── test_physio_obj.py │ ├── test_utils.py │ └── test_viz.py ├── utils.py └── viz.py ├── pyproject.toml 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