├── LICENSE ├── MANIFEST.in ├── Plascad.jpg ├── README.md ├── example.jpg ├── plas_cad ├── __init__.py ├── __main__.py ├── database │ ├── ARGsdb │ │ ├── ARGsDB.fasta │ │ ├── ARGsDB.phr │ │ ├── ARGsDB.pin │ │ ├── ARGsDB.psq │ │ └── ARGsDB_des.txt │ └── hmm_module │ │ ├── ATPase_hmm │ │ ├── MPFF_ATPase.hmm │ │ ├── MPFG_ATPase.hmm │ │ ├── MPFI_ATPase.hmm │ │ └── MPFT_ATPase.hmm │ │ ├── MOB_hmm │ │ ├── MOBB.hmm │ │ ├── MOBC.hmm │ │ ├── MOBF.hmm │ │ ├── MOBH.hmm │ │ ├── MOBP.hmm │ │ ├── MOBPB.hmm │ │ ├── MOBQ.hmm │ │ ├── MOBT.hmm │ │ └── MOBV.hmm │ │ ├── MPFF_hmm │ │ ├── MPFF_traC.hmm │ │ ├── MPFF_traE.hmm │ │ ├── MPFF_traH.hmm │ │ ├── MPFF_traK.hmm │ │ ├── MPFF_traL.hmm │ │ ├── MPFF_traN.hmm │ │ ├── MPFF_traU.hmm │ │ ├── MPFF_traV.hmm │ │ └── MPFF_traW.hmm │ │ ├── MPFG_hmm │ │ ├── MPFG_41.hmm │ │ ├── MPFG_44.hmm │ │ ├── MPFG_51.hmm │ │ └── MPFG_52.hmm │ │ ├── MPFI_hmm │ │ ├── MPFI_traI.hmm │ │ ├── MPFI_traK.hmm │ │ ├── MPFI_traL.hmm │ │ ├── MPFI_traM.hmm │ │ ├── MPFI_traN.hmm │ │ ├── MPFI_traP.hmm │ │ ├── MPFI_traQ.hmm │ │ ├── MPFI_traR.hmm │ │ ├── MPFI_traW.hmm │ │ └── MPFI_traY.hmm │ │ ├── MPFT_hmm │ │ ├── MPFT_virB3.hmm │ │ ├── MPFT_virB6.hmm │ │ ├── MPFT_virB8.hmm │ │ └── MPFT_virB9.hmm │ │ ├── MPF_system_hmm │ │ ├── MPFF_ATPase.hmm │ │ ├── MPFF_T4CP_1.hmm │ │ ├── MPFF_T4CP_2.hmm │ │ ├── MPFF_traC.hmm │ │ ├── MPFF_traE.hmm │ │ ├── MPFF_traH.hmm │ │ ├── MPFF_traK.hmm │ │ ├── MPFF_traL.hmm │ │ ├── MPFF_traN.hmm │ │ ├── MPFF_traU.hmm │ │ ├── MPFF_traV.hmm │ │ ├── MPFF_traW.hmm │ │ ├── MPFG_41.hmm │ │ ├── MPFG_44.hmm │ │ ├── MPFG_51.hmm │ │ ├── MPFG_52.hmm │ │ ├── MPFG_ATPase.hmm │ │ ├── MPFG_T4CP_1.hmm │ │ ├── MPFG_T4CP_2.hmm │ │ ├── MPFI_ATPase.hmm │ │ ├── MPFI_T4CP_1.hmm │ │ ├── MPFI_T4CP_2.hmm │ │ ├── MPFI_traI.hmm │ │ ├── MPFI_traK.hmm │ │ ├── MPFI_traL.hmm │ │ ├── MPFI_traM.hmm │ │ ├── MPFI_traN.hmm │ │ ├── MPFI_traP.hmm │ │ ├── MPFI_traQ.hmm │ │ ├── MPFI_traR.hmm │ │ ├── MPFI_traW.hmm │ │ ├── MPFI_traY.hmm │ │ ├── MPFT_ATPase.hmm │ │ ├── MPFT_T4CP_1.hmm │ │ 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