├── .gitignore ├── .travis.yml ├── LICENSE ├── README.md ├── docs ├── index.html ├── multitax.html ├── multitax │ ├── multitax.html │ └── utils.html └── search.js ├── make_docs.sh ├── multitax ├── __init__.py ├── customtx.py ├── dummytx.py ├── greengenestx.py ├── gtdbtx.py ├── multitax.py ├── ncbitx.py ├── otttx.py ├── silvatx.py └── utils.py ├── pyproject.toml ├── setup.py └── tests └── multitax ├── data_minimal ├── custom.tsv.gz ├── custom2.tsv.gz ├── custom_unit_test.tsv.gz ├── gg.txt.gz ├── gtdb_ar.tsv.gz ├── gtdb_ar_metadata.tsv.gz ├── gtdb_bac.tsv.gz ├── gtdb_bac_metadata.tsv.gz ├── ncbi.tar.gz ├── ott.tgz └── silva.txt.gz ├── integration ├── test_common.py ├── test_empty.py └── test_online.py ├── unit ├── test_functions.py └── test_init.py └── utils.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pirovc/multitax/HEAD/.gitignore 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