├── .gitignore ├── LICENSE ├── README.md ├── example ├── args.txt ├── example_importance_sampling.sh ├── example_ldtable.sh ├── proposal.txt └── table.txt ├── ldpop ├── __init__.py ├── compute_likelihoods.py ├── compute_stationary.py ├── lookup_table.py ├── moran_augmented.py ├── moran_finite.py └── proposal.py ├── run ├── ImportanceSampler.jar ├── ldproposal.py └── ldtable.py ├── setup.py └── test ├── example_ldproposal.txt ├── example_ldtable.txt └── test_ldpop.py /.gitignore: -------------------------------------------------------------------------------- 1 | *~ 2 | *pyc 3 | .cache 4 | ldpop.egg-info/* 5 | build/* 6 | -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/popgenmethods/ldpop/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: 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