├── .DS_Store ├── .gitignore ├── LICENSE ├── README.md ├── dist ├── .DS_Store ├── pandamap-4.0.0-py3-none-any.whl └── pandamap-4.0.0.tar.gz ├── example ├── 1els.pdb ├── 1els_interactions.png ├── 1els_interactions_report.txt ├── 1m17.pdb ├── 1m17_interactions.png ├── 1m17_interactions_report.txt ├── 4jmz.pdb ├── 4jmz_interactions.png ├── 4jmz_interactions_report.txt ├── complex.pdb ├── complex_3d_visualization.html ├── complex_interactions.png ├── complex_interactions_report.txt └── pandamap_3d_visualization.png ├── logo └── pandamap-logo.svg ├── pyproject.toml ├── setup.py ├── src ├── .DS_Store ├── pandamap.egg-info │ ├── PKG-INFO │ ├── SOURCES.txt │ ├── dependency_links.txt │ ├── entry_points.txt │ ├── requires.txt │ └── top_level.txt └── pandamap │ ├── 3d_backup.py │ ├── __init__.py │ ├── __pycache__ │ ├── __init__.cpython-310.pyc │ ├── __init__.cpython-312.pyc │ ├── __init__.cpython-313.pyc │ ├── cli.cpython-310.pyc │ ├── cli.cpython-312.pyc │ ├── cli.cpython-313.pyc │ ├── core.cpython-310.pyc │ ├── core.cpython-312.pyc │ ├── core.cpython-313.pyc │ ├── create_3d_view.cpython-312.pyc │ ├── create_3d_view.cpython-313.pyc │ ├── direct_3d.cpython-312.pyc │ ├── improved_interaction_detection.cpython-310.pyc │ ├── improved_interaction_detection.cpython-312.pyc │ ├── improved_interaction_detection.cpython-313.pyc │ └── visualization_3d.cpython-312.pyc │ ├── cli.py │ ├── core.py │ ├── create_3d_view.py │ ├── improved_interaction_detection.py │ └── utils │ ├── __init__.py │ ├── __pycache__ │ └── versioning.cpython-313.pyc │ └── versioning.py └── test ├── .DS_Store ├── 1els.pdb ├── 1els_interactions.png ├── 1els_interactions_report.txt ├── 1m17.pdb ├── 1m17.txt ├── 1m17_interactions.png ├── 1m17_interactions_report.txt ├── 4jmz.pdb ├── 4jmz_interactions.png ├── 4jmz_interactions_report.txt ├── A0152a.pdb ├── HEM.txt ├── PAH.txt ├── complex.pdb ├── complex.txt ├── complex_3d_visualization.html ├── complex_interactions.png └── pandamap_3d_visualization.png 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