├── .dockerignore ├── .git-blame-ignore-revs ├── .gitattributes ├── .github ├── ISSUE_TEMPLATE │ ├── bug-report.yml │ ├── config.yml │ ├── developer.yml │ ├── documentation.yml │ └── feature-request.yml ├── PULL_REQUEST_TEMPLATE.md ├── config.yml ├── dependabot.yml ├── release.yml └── workflows │ ├── devcontainer-docker-image.yml │ ├── docker-image.yml │ ├── mypy.yml │ ├── pr-auto-label.yml │ ├── publish-release-notes-to-discourse.yml │ ├── release.yml │ ├── slash_dispatch.yml │ ├── tests.yml │ └── zizmor.yml ├── .gitignore ├── .gitpod.yml ├── .pre-commit-config.yaml ├── .readthedocs.yml ├── ARCHITECTURE.md ├── CITATION.cff ├── CODE_OF_CONDUCT.md ├── CONTRIBUTING.md ├── GOVERNANCE.md ├── LICENSE ├── MANIFEST.in ├── Makefile ├── README.rst ├── benchmarks ├── asv.conf.json └── benchmarks │ ├── __init__.py │ └── benchmarks.py ├── binder ├── apt.txt ├── requirements.txt └── trigger_binder.sh ├── codecov.yml ├── conda-envs ├── environment-alternative-backends.yml ├── environment-dev.yml ├── environment-docs.yml ├── environment-test.yml ├── windows-environment-dev.yml └── windows-environment-test.yml ├── docs ├── Architecture.png ├── community_diagram.png ├── logos │ ├── PyMC.ai │ ├── PyMC.eps │ ├── PyMC.ico │ ├── PyMC.jpg │ ├── PyMC.pdf │ ├── PyMC.png │ ├── sponsors │ │ ├── numfocus.png │ │ ├── odsc.png │ │ └── pymc-labs.png │ └── svg │ │ ├── PyMC_banner.svg │ │ ├── PyMC_circle.svg │ │ └── PyMC_square.svg └── source │ ├── 404.md │ ├── _templates │ ├── autosummary │ │ └── class.rst │ └── distribution.rst │ ├── api.rst │ ├── api │ ├── backends.rst │ ├── data.rst │ ├── dims.rst │ ├── dims │ │ ├── distributions.rst │ │ ├── math.rst │ │ ├── model.rst │ │ └── transforms.rst │ ├── distributions.rst │ ├── distributions │ │ ├── censored.rst │ │ ├── continuous.rst │ │ ├── custom.rst │ │ ├── discrete.rst │ │ ├── mixture.rst │ │ ├── multivariate.rst │ │ ├── simulator.rst │ │ ├── timeseries.rst │ │ ├── transforms.rst │ │ ├── truncated.rst │ │ └── utilities.rst │ ├── gp.rst │ ├── gp │ │ ├── cov.rst │ │ ├── implementations.rst │ │ ├── mean.rst │ │ └── util.rst │ ├── logprob.rst │ ├── math.rst │ ├── misc.rst │ ├── model.rst │ ├── model │ │ ├── conditioning.rst │ │ ├── core.rst │ │ ├── fgraph.rst │ │ └── optimization.rst │ ├── ode.rst │ ├── pytensorf.rst │ ├── samplers.rst │ ├── shape_utils.rst │ ├── smc.rst │ ├── testing.rst │ ├── tuning.rst │ └── vi.rst │ ├── conf.py │ ├── contributing │ ├── build_docs.md │ ├── developer_guide.md │ ├── docker_container.md │ ├── gitpod │ │ ├── gitpod_integration.png │ │ └── gitpod_workspace.png │ ├── implementing_distribution.md │ ├── index.md │ ├── jupyter_style.md │ ├── pr_checklist.md │ ├── pr_tutorial.md │ ├── python_style.md │ ├── release_checklist.md │ ├── review_pr_pymc_examples.md │ ├── running_the_test_suite.md │ ├── using_gitpod.md │ └── versioning_schemes_explanation.md │ ├── glossary.md │ ├── guides │ ├── Gaussian_Processes.rst │ └── Probability_Distributions.rst │ ├── images │ ├── forestplot.png │ └── model_to_graphviz.png │ ├── index.md │ ├── installation.md │ ├── learn.md │ └── learn │ ├── books.md │ ├── consulting.md │ ├── core_notebooks │ ├── GLM_linear.ipynb │ ├── Gaussian_Processes.rst │ ├── dimensionality.ipynb │ ├── dims_module.ipynb │ ├── index.md │ ├── model_comparison.ipynb │ ├── posterior_predictive.ipynb │ ├── pymc_overview.ipynb │ └── pymc_pytensor.ipynb │ ├── usage_overview.rst │ └── videos_and_podcasts.md ├── pymc ├── __init__.py ├── _version.py ├── backends │ ├── __init__.py │ ├── arviz.py │ ├── base.py │ ├── mcbackend.py │ ├── ndarray.py │ ├── report.py │ └── zarr.py ├── blocking.py ├── data.py ├── dims │ ├── __init__.py │ ├── distributions │ │ ├── __init__.py │ │ ├── core.py │ │ ├── scalar.py │ │ ├── transforms.py │ │ └── vector.py │ ├── math.py │ └── model.py ├── distributions │ ├── __init__.py │ ├── censored.py │ ├── continuous.py │ ├── custom.py │ ├── discrete.py │ ├── dist_math.py │ ├── distribution.py │ ├── mixture.py │ ├── moments │ │ ├── __init__.py │ │ └── means.py │ ├── multivariate.py │ ├── shape_utils.py │ ├── simulator.py │ ├── timeseries.py │ ├── transforms.py │ └── truncated.py ├── exceptions.py ├── func_utils.py ├── gp │ ├── __init__.py │ ├── cov.py │ ├── gp.py │ ├── hsgp_approx.py │ ├── mean.py │ └── util.py ├── initial_point.py ├── logprob │ ├── LICENSE_AEPPL.txt │ ├── __init__.py │ ├── abstract.py │ ├── basic.py │ ├── binary.py │ ├── censoring.py │ ├── checks.py │ ├── cumsum.py │ ├── linalg.py │ ├── mixture.py │ ├── order.py │ ├── rewriting.py │ ├── scan.py │ ├── tensor.py │ ├── transform_value.py │ ├── transforms.py │ └── utils.py ├── math.py ├── model │ ├── __init__.py │ ├── core.py │ ├── fgraph.py │ └── transform │ │ ├── __init__.py │ │ ├── basic.py │ │ ├── conditioning.py │ │ └── optimization.py ├── model_graph.py ├── ode │ ├── __init__.py │ ├── ode.py │ └── utils.py ├── plots │ └── __init__.py ├── printing.py ├── progress_bar.py ├── pytensorf.py ├── sampling │ ├── __init__.py │ ├── deterministic.py │ ├── forward.py │ ├── jax.py │ ├── mcmc.py │ ├── parallel.py │ └── population.py ├── smc │ ├── __init__.py │ ├── kernels.py │ └── sampling.py ├── stats │ ├── __init__.py │ ├── convergence.py │ └── log_density.py ├── step_methods │ ├── __init__.py │ ├── arraystep.py │ ├── compound.py │ ├── hmc │ │ ├── __init__.py │ │ ├── base_hmc.py │ │ ├── hmc.py │ │ ├── integration.py │ │ ├── nuts.py │ │ └── quadpotential.py │ ├── metropolis.py │ ├── slicer.py │ ├── state.py │ └── step_sizes.py ├── testing.py ├── tuning │ ├── __init__.py │ ├── scaling.py │ └── starting.py ├── util.py ├── variational │ ├── __init__.py │ ├── approximations.py │ ├── callbacks.py │ ├── inference.py │ ├── minibatch_rv.py │ ├── operators.py │ ├── opvi.py │ ├── stein.py │ ├── test_functions.py │ └── updates.py └── vartypes.py ├── pyproject.toml ├── requirements-dev.txt ├── requirements.txt ├── scripts ├── Dockerfile ├── check_all_tests_are_covered.py ├── dev.Dockerfile ├── docker_container.sh ├── generate_pip_deps_from_conda.py ├── publish_release_notes_to_discourse.py ├── run_mypy.py ├── slowest_tests │ ├── extract-slow-tests.py │ └── update-slowest-times-issue.sh ├── test.sh └── test_publish_release_notes.py ├── setup.py └── tests ├── __init__.py ├── backends ├── __init__.py ├── fixtures.py ├── test_arviz.py ├── test_base.py ├── test_mcbackend.py ├── test_ndarray.py └── test_zarr.py ├── conftest.py ├── dims ├── __init__.py ├── distributions │ ├── __init__.py │ ├── test_core.py │ ├── test_scalar.py │ └── test_vector.py ├── test_model.py └── utils.py ├── distributions ├── __init__.py ├── moments │ ├── __init__.py │ └── test_means.py ├── test_censored.py ├── test_continuous.py ├── test_custom.py ├── test_discrete.py ├── test_dist_math.py ├── test_distribution.py ├── test_mixture.py ├── test_multivariate.py ├── test_random_alternative_backends.py ├── test_shape_utils.py ├── test_simulator.py ├── test_timeseries.py ├── test_transform.py └── test_truncated.py ├── gp ├── __init__.py ├── test_cov.py ├── test_gp.py ├── test_hsgp_approx.py ├── test_mean.py └── test_util.py ├── helpers.py ├── logprob ├── __init__.py ├── test_abstract.py ├── test_basic.py ├── test_binary.py ├── test_censoring.py ├── test_checks.py ├── test_composite_logprob.py ├── test_cumsum.py ├── test_linalg.py ├── test_mixture.py ├── test_order.py ├── test_rewriting.py ├── test_scan.py ├── test_tensor.py ├── test_transform_value.py ├── test_transforms.py ├── test_utils.py └── utils.py ├── model ├── __init__.py ├── test_core.py ├── test_fgraph.py └── transform │ ├── __init__.py │ ├── test_basic.py │ ├── test_conditioning.py │ └── test_optimization.py ├── models.py ├── ode ├── __init__.py ├── test_ode.py └── test_utils.py ├── sampler_fixtures.py ├── sampling ├── __init__.py ├── test_deterministic.py ├── test_forward.py ├── test_jax.py ├── test_mcmc.py ├── test_mcmc_external.py ├── test_parallel.py └── test_population.py ├── smc ├── __init__.py └── test_smc.py ├── stats ├── __init__.py ├── test_convergence.py └── test_log_density.py 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