├── .github └── workflows │ ├── build_and_upload_wheels.yml │ └── test_bamread.yml ├── .gitignore ├── CHANGELOG.txt ├── README.md ├── bamread ├── __init__.py ├── read.py └── src │ ├── __init__.py │ └── bamread.pyx ├── pyproject.toml ├── setup.py └── tests └── control.bam /.github/workflows/build_and_upload_wheels.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/.github/workflows/build_and_upload_wheels.yml -------------------------------------------------------------------------------- /.github/workflows/test_bamread.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/.github/workflows/test_bamread.yml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/.gitignore -------------------------------------------------------------------------------- /CHANGELOG.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/CHANGELOG.txt -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/README.md -------------------------------------------------------------------------------- /bamread/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/bamread/__init__.py -------------------------------------------------------------------------------- /bamread/read.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/bamread/read.py -------------------------------------------------------------------------------- /bamread/src/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /bamread/src/bamread.pyx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/bamread/src/bamread.pyx -------------------------------------------------------------------------------- /pyproject.toml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/pyproject.toml -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/setup.py -------------------------------------------------------------------------------- /tests/control.bam: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/pyranges/bamread/HEAD/tests/control.bam --------------------------------------------------------------------------------