├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── LICENSE.md ├── NAMESPACE ├── R ├── bets.covid19.R ├── data.R ├── functions.R ├── likelihood_inference.R ├── parse_infected.R └── simulate.R ├── README.md ├── bayesian ├── .DS_Store ├── README.md ├── SampleConditional.py ├── SamplePrior.py ├── SampleSimple.py ├── SampleTwoR.py ├── SampleTwoRGeomE.py └── results │ ├── compare_prior_post │ ├── .Rapp.history │ ├── compare_prior_post.pdf │ ├── plot.R │ └── prior_post_p14.csv │ ├── convergence │ ├── compute_rhat.R │ ├── simulations.csv │ ├── simulations_simple_alpha_1.000.csv │ ├── simulations_simple_alpha_10.000.csv │ ├── simulations_twoR_alpha_1.000.csv │ └── simulations_twoR_alpha_10.000.csv │ └── plot_of_w │ ├── plot_of_w.R │ ├── posterior_of_w.pdf │ ├── posterior_w.csv │ ├── posterior_w_age.csv │ └── posterior_w_gender.csv ├── data ├── .DS_Store ├── covid19_data.rda └── wuhan_exported.rda └── man ├── BETS.inference.Rd ├── BETS.likelihood.Rd ├── BETS.likelihood.conditional.Rd ├── BETS.likelihood.unconditional.Rd ├── age.process.Rd ├── bets.covid19.Rd ├── covid19_data.Rd ├── date.process.Rd ├── parse.infected.Rd ├── parse.one.infected.Rd ├── preprocess.data.Rd ├── simulate.case.Rd └── wuhan_exported.Rd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/qingyuanzhao/bets.covid19/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- 1 | .Rproj.user 2 | -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/qingyuanzhao/bets.covid19/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /LICENSE.md: 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