├── .gitignore ├── CheckPackage.ipynb ├── CrossBucketSimple.ipynb ├── LICENSE.txt ├── Package.diff.ipynb ├── Package.filter.ipynb ├── README.md ├── ShallowPush.ipynb ├── athena ├── QuiltAthena.ipynb ├── README.md ├── create_package_tables.py ├── manifests.ddl ├── manifests_view.ddl ├── named_packages.ddl └── named_packages_view.ddl ├── athena_cfn ├── .taskcat.yml ├── README.md └── athena-cfn.yml ├── interactive_data_dictionary ├── .quiltignore ├── dataDictionary.ipynb ├── dbtToBusinessDataDictionary.ipynb ├── quilt_summarize.json ├── requirements.txt └── salesforce.yaml ├── metadata └── work-with-metadata.ipynb ├── quilt2 ├── Examples.ipynb ├── JupyterSearch │ ├── AnalyzeNotebooks.ipynb │ ├── MeasureSearch.ipynb │ └── dec_sample.pkl ├── Numpy, easy package edit.ipynb ├── bio │ ├── BioExamples.ipynb │ └── example.fasta ├── dev │ ├── .gitignore │ └── modifying packages.ipynb ├── example.json ├── files_vs_packages │ ├── Files.ipynb │ └── Packages.ipynb ├── graphics │ └── FiveThirtyEight.ipynb ├── json.yml ├── machine_learning │ └── MLData.ipynb ├── matlab │ └── Satellite images.ipynb ├── netcdf │ └── NetCDF.ipynb ├── nginx-ssl │ ├── Dockerfile │ └── nginx-quilt.conf ├── requirements.txt └── src │ ├── ADAM21P1.mageck.gene_summary.txt │ ├── C17orf75.mageck.gene_summary.txt │ ├── CCDC182.mageck.gene_summary.txt │ ├── IER2.mageck.gene_summary.txt │ ├── MIR1226.mageck.gene_summary.xlsx │ ├── MIR651.mageck.gene_summary.xlsx │ ├── MITD1.mageck.gene_summary.xlsx │ ├── PRSS23.mageck.gene_summary.txt │ ├── README.md │ ├── USF3.mageck.gene_summary.txt │ └── build.yml └── visualizing-data-quality ├── QuiltAltairHistogram.ipynb ├── README.md ├── export-2021-10-08T22_27_38.805Z.json ├── justmadeit.json ├── nouns.txt └── words.txt /.gitignore: -------------------------------------------------------------------------------- 1 | .DS_Store 2 | .ipynb_checkpoints 3 | quilt_packages 4 | -------------------------------------------------------------------------------- /CheckPackage.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/CheckPackage.ipynb -------------------------------------------------------------------------------- /CrossBucketSimple.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/CrossBucketSimple.ipynb -------------------------------------------------------------------------------- /LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/LICENSE.txt -------------------------------------------------------------------------------- /Package.diff.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/Package.diff.ipynb -------------------------------------------------------------------------------- /Package.filter.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/Package.filter.ipynb -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/README.md -------------------------------------------------------------------------------- /ShallowPush.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/ShallowPush.ipynb -------------------------------------------------------------------------------- /athena/QuiltAthena.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/QuiltAthena.ipynb -------------------------------------------------------------------------------- /athena/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/README.md -------------------------------------------------------------------------------- /athena/create_package_tables.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/create_package_tables.py -------------------------------------------------------------------------------- /athena/manifests.ddl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/manifests.ddl -------------------------------------------------------------------------------- /athena/manifests_view.ddl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/manifests_view.ddl -------------------------------------------------------------------------------- /athena/named_packages.ddl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/named_packages.ddl -------------------------------------------------------------------------------- /athena/named_packages_view.ddl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena/named_packages_view.ddl -------------------------------------------------------------------------------- /athena_cfn/.taskcat.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena_cfn/.taskcat.yml -------------------------------------------------------------------------------- /athena_cfn/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena_cfn/README.md -------------------------------------------------------------------------------- /athena_cfn/athena-cfn.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/athena_cfn/athena-cfn.yml -------------------------------------------------------------------------------- /interactive_data_dictionary/.quiltignore: -------------------------------------------------------------------------------- 1 | .DS_Store 2 | .ipynb_* 3 | -------------------------------------------------------------------------------- /interactive_data_dictionary/dataDictionary.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/interactive_data_dictionary/dataDictionary.ipynb -------------------------------------------------------------------------------- /interactive_data_dictionary/dbtToBusinessDataDictionary.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/interactive_data_dictionary/dbtToBusinessDataDictionary.ipynb -------------------------------------------------------------------------------- /interactive_data_dictionary/quilt_summarize.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/interactive_data_dictionary/quilt_summarize.json -------------------------------------------------------------------------------- /interactive_data_dictionary/requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/interactive_data_dictionary/requirements.txt -------------------------------------------------------------------------------- /interactive_data_dictionary/salesforce.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/interactive_data_dictionary/salesforce.yaml -------------------------------------------------------------------------------- /metadata/work-with-metadata.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/metadata/work-with-metadata.ipynb -------------------------------------------------------------------------------- /quilt2/Examples.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/Examples.ipynb -------------------------------------------------------------------------------- /quilt2/JupyterSearch/AnalyzeNotebooks.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/JupyterSearch/AnalyzeNotebooks.ipynb -------------------------------------------------------------------------------- /quilt2/JupyterSearch/MeasureSearch.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/JupyterSearch/MeasureSearch.ipynb -------------------------------------------------------------------------------- /quilt2/JupyterSearch/dec_sample.pkl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/JupyterSearch/dec_sample.pkl -------------------------------------------------------------------------------- /quilt2/Numpy, easy package edit.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/Numpy, easy package edit.ipynb -------------------------------------------------------------------------------- /quilt2/bio/BioExamples.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/bio/BioExamples.ipynb -------------------------------------------------------------------------------- /quilt2/bio/example.fasta: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/bio/example.fasta -------------------------------------------------------------------------------- /quilt2/dev/.gitignore: -------------------------------------------------------------------------------- 1 | quilt_packages 2 | .ipynb* 3 | -------------------------------------------------------------------------------- /quilt2/dev/modifying packages.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/dev/modifying packages.ipynb -------------------------------------------------------------------------------- /quilt2/example.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/example.json -------------------------------------------------------------------------------- /quilt2/files_vs_packages/Files.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/files_vs_packages/Files.ipynb -------------------------------------------------------------------------------- /quilt2/files_vs_packages/Packages.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/files_vs_packages/Packages.ipynb -------------------------------------------------------------------------------- /quilt2/graphics/FiveThirtyEight.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/graphics/FiveThirtyEight.ipynb -------------------------------------------------------------------------------- /quilt2/json.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/json.yml -------------------------------------------------------------------------------- /quilt2/machine_learning/MLData.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/machine_learning/MLData.ipynb -------------------------------------------------------------------------------- /quilt2/matlab/Satellite images.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/matlab/Satellite images.ipynb -------------------------------------------------------------------------------- /quilt2/netcdf/NetCDF.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/netcdf/NetCDF.ipynb -------------------------------------------------------------------------------- /quilt2/nginx-ssl/Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/nginx-ssl/Dockerfile -------------------------------------------------------------------------------- /quilt2/nginx-ssl/nginx-quilt.conf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/nginx-ssl/nginx-quilt.conf -------------------------------------------------------------------------------- /quilt2/requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/requirements.txt -------------------------------------------------------------------------------- /quilt2/src/ADAM21P1.mageck.gene_summary.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/ADAM21P1.mageck.gene_summary.txt -------------------------------------------------------------------------------- /quilt2/src/C17orf75.mageck.gene_summary.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/C17orf75.mageck.gene_summary.txt -------------------------------------------------------------------------------- /quilt2/src/CCDC182.mageck.gene_summary.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/CCDC182.mageck.gene_summary.txt -------------------------------------------------------------------------------- /quilt2/src/IER2.mageck.gene_summary.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/IER2.mageck.gene_summary.txt -------------------------------------------------------------------------------- /quilt2/src/MIR1226.mageck.gene_summary.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/MIR1226.mageck.gene_summary.xlsx -------------------------------------------------------------------------------- /quilt2/src/MIR651.mageck.gene_summary.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/MIR651.mageck.gene_summary.xlsx -------------------------------------------------------------------------------- /quilt2/src/MITD1.mageck.gene_summary.xlsx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/MITD1.mageck.gene_summary.xlsx -------------------------------------------------------------------------------- /quilt2/src/PRSS23.mageck.gene_summary.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/PRSS23.mageck.gene_summary.txt -------------------------------------------------------------------------------- /quilt2/src/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/README.md -------------------------------------------------------------------------------- /quilt2/src/USF3.mageck.gene_summary.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/USF3.mageck.gene_summary.txt -------------------------------------------------------------------------------- /quilt2/src/build.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/quilt2/src/build.yml -------------------------------------------------------------------------------- /visualizing-data-quality/QuiltAltairHistogram.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/visualizing-data-quality/QuiltAltairHistogram.ipynb -------------------------------------------------------------------------------- /visualizing-data-quality/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/visualizing-data-quality/README.md -------------------------------------------------------------------------------- /visualizing-data-quality/export-2021-10-08T22_27_38.805Z.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/visualizing-data-quality/export-2021-10-08T22_27_38.805Z.json -------------------------------------------------------------------------------- /visualizing-data-quality/justmadeit.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/visualizing-data-quality/justmadeit.json -------------------------------------------------------------------------------- /visualizing-data-quality/nouns.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/visualizing-data-quality/nouns.txt -------------------------------------------------------------------------------- /visualizing-data-quality/words.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/quiltdata/examples/HEAD/visualizing-data-quality/words.txt --------------------------------------------------------------------------------