├── .github └── workflows │ ├── build.yml │ ├── github_release.yml │ ├── scijava-maven.yml │ └── update-gradle.yml ├── .gitignore ├── LICENSE ├── README.md ├── gradle └── wrapper │ ├── gradle-wrapper.jar │ └── gradle-wrapper.properties ├── gradlew ├── gradlew.bat ├── qupath-intellij.png ├── settings.gradle.kts └── src └── main ├── java └── qupath │ └── ext │ └── instanseg │ ├── core │ ├── DetectionMeasurer.java │ ├── InstanSeg.java │ ├── InstanSegModel.java │ ├── InstanSegOutputToObjectConverter.java │ ├── InstanSegResults.java │ ├── MatTranslator.java │ ├── PruneObjectOutputHandler.java │ ├── PytorchManager.java │ └── TilePredictionProcessor.java │ └── ui │ ├── CheckModelCache.java │ ├── InputChannelItem.java │ ├── InstanSegController.java │ ├── InstanSegExtension.java │ ├── InstanSegPreferences.java │ ├── InstanSegResources.java │ ├── InstanSegTask.java │ ├── InstanSegUtils.java │ ├── MessageTextHelper.java │ ├── ModelListCell.java │ ├── OutputChannelItem.java │ ├── RemoteModel.java │ └── Watcher.java └── resources ├── META-INF └── services │ └── qupath.lib.gui.extensions.QuPathExtension └── qupath └── ext └── instanseg └── ui ├── instanseg.css ├── instanseg_control.fxml ├── model-index.json └── strings.properties /.github/workflows/build.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/qupath/qupath-extension-instanseg/HEAD/.github/workflows/build.yml -------------------------------------------------------------------------------- /.github/workflows/github_release.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/qupath/qupath-extension-instanseg/HEAD/.github/workflows/github_release.yml -------------------------------------------------------------------------------- /.github/workflows/scijava-maven.yml: -------------------------------------------------------------------------------- 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