├── LICENSE ├── README.md ├── examples └── 01-basic-log │ ├── 00001.log │ ├── 00002.log │ └── parse-log.ipynb ├── pynamd ├── __init__.py ├── config.py ├── cphlog.py ├── log.py ├── msmle │ ├── __init__.py │ ├── hotest.py │ └── msmle.py └── xgs.py ├── scripts ├── cphanalyze ├── namd2flatfile ├── namd2histogram ├── namdavgs ├── namdlog2conf └── xgsanalyze ├── setup.py └── tests ├── data ├── 00002-err.log └── minimal.log └── test_log.py /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/radakb/pynamd/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/radakb/pynamd/HEAD/README.md -------------------------------------------------------------------------------- /examples/01-basic-log/00001.log: 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