├── .gitignore ├── README.md ├── ai-checkpoint ├── README.md ├── async-distributed-checkpoint-vision-vit-perlmutter.sh ├── async-distributed-checkpoint-vision-vit.py ├── checkpoint-vision-vit-perlmutter.sh ├── checkpoint-vision-vit.py ├── distributed-checkpoint-vision-vit-perlmutter.sh └── distributed-checkpoint-vision-vit.py ├── array ├── Makefile ├── array-mpiio-write-read.c ├── array-mpiio-write.c ├── array-pnetcdf-op-combine.c ├── array-pnetcdf-write-read.c ├── array-pnetcdf-write.c ├── array.h ├── description.c ├── master.c ├── mpi-util.h ├── pnetcdf-util.h ├── posix.c ├── solutions │ ├── Makefile │ ├── array-mpiio-write-read.c │ ├── array-mpiio-write-read.py │ ├── array-mpiio-write.c │ ├── array-mpiio-write.py │ ├── array-pnetcdf-op-combine-compare.c │ ├── array-pnetcdf-op-combine.c │ ├── array-pnetcdf-write-read.c │ ├── array-pnetcdf-write.c │ ├── array.h │ ├── master.c │ ├── master.py │ ├── mpi-util.h │ ├── pnetcdf-util.h │ ├── posix.c │ ├── posix.py │ ├── robl_3-master_id358771_7-31-70112-1035058853799806916_1.darshan │ ├── submit-ascent.sh │ ├── submit-polaris.sh │ ├── submit-theta.sh │ ├── util.c │ └── util.h ├── submit-aurora.sh ├── submit-polaris.sh ├── submit-theta.sh ├── util.c └── util.h ├── aurora-setup-env.sh ├── benchmarking ├── README.md ├── alignment-demo.out.stripe1 │ ├── aligned_1M.out │ ├── slurm-1502184.out │ └── unaligned_1M.out ├── alignment-demo.out.stripe4 │ ├── aligned_1M.out │ ├── slurm-1502206.out │ └── unaligned_1M.out ├── alignment-demo.sbatch ├── cache-demo.out.0 │ ├── cache_demo.0.darshan │ ├── cache_demo.1.darshan │ ├── cache_demo.2.darshan │ ├── cache_demo.3.darshan │ ├── cache_demo.4.darshan │ ├── cache_demo.5.darshan │ ├── cache_demo.out.0 │ ├── cache_demo.out.1 │ ├── cache_demo.out.2 │ ├── cache_demo.out.3 │ ├── cache_demo.out.4 │ ├── cache_demo.out.5 │ └── slurm-23448871.out ├── cache-demo.out.1 │ ├── cache_demo.0.darshan │ ├── cache_demo.1.darshan │ ├── cache_demo.2.darshan │ ├── cache_demo.3.darshan │ ├── cache_demo.4.darshan │ ├── cache_demo.5.darshan │ ├── cache_demo.out.0 │ ├── cache_demo.out.1 │ ├── cache_demo.out.2 │ ├── cache_demo.out.3 │ ├── cache_demo.out.4 │ ├── cache_demo.out.5 │ └── slurm-23449690.out ├── cache-demo.sbatch ├── hdf5.ior └── ior-3.2.1+atpesc │ ├── AUTHORS │ ├── COPYRIGHT │ ├── META │ ├── Makefile.am │ ├── Makefile.in │ ├── NEWS │ ├── README.md │ ├── aclocal.m4 │ ├── config │ ├── ax_prog_cc_mpi.m4 │ ├── compile │ ├── config.guess │ ├── config.sub │ ├── depcomp │ ├── install-sh │ ├── missing │ ├── test-driver │ └── x_ac_meta.m4 │ ├── configure │ ├── configure.ac │ ├── contrib │ ├── Makefile.am │ ├── Makefile.in │ └── cbif.c │ ├── doc │ ├── Makefile.am │ ├── Makefile.in │ ├── USER_GUIDE │ └── mdtest.1 │ ├── src │ ├── Makefile.am │ ├── Makefile.in │ ├── aiori-DUMMY.c │ ├── aiori-HDF5.c │ ├── aiori-HDFS.c │ ├── aiori-IME.c │ ├── aiori-MMAP.c │ ├── aiori-MPIIO.c │ ├── aiori-NCMPI.c │ ├── aiori-POSIX.c │ ├── aiori-RADOS.c │ ├── aiori-S3.c │ ├── aiori.c │ ├── aiori.h │ ├── config.h.in │ ├── ior-internal.h │ ├── ior-main.c │ ├── ior-output.c │ ├── ior.c │ ├── ior.h │ ├── iordef.h │ ├── mdtest-main.c │ ├── mdtest.c │ ├── mdtest.h │ ├── option.c │ ├── option.h │ ├── parse_options.c │ ├── parse_options.h │ ├── test │ │ └── lib.c │ ├── utilities.c │ └── utilities.h │ └── testing │ ├── basic-tests.sh │ ├── bug-multi-node.conf │ ├── complex-tests.sh │ ├── docker │ ├── README.md │ ├── centos6 │ │ ├── Dockerfile │ │ └── run-test.sh │ ├── centos7 │ │ ├── Dockerfile │ │ └── run-test.sh │ ├── ceph │ │ └── NOTES │ ├── prepare.sh │ ├── run-all-tests.sh │ ├── ubuntu14.04 │ │ ├── Dockerfile │ │ └── run-test.sh │ └── ubuntu16.04 │ │ ├── Dockerfile │ │ └── run-test.sh │ └── test-lib.sh ├── daos ├── job-dfs.sh ├── job-mpiio.sh ├── job-posix-il.sh ├── job-posix.sh └── src │ ├── Makefile │ ├── README │ ├── array.h │ ├── daos-hello-world │ ├── daos-hello-world.c │ ├── dfs-read │ ├── dfs-read.c │ ├── dfs-write │ ├── dfs-write.c │ ├── mpiio-read │ ├── mpiio-read.c │ ├── mpiio-write │ ├── mpiio-write.c │ ├── posix-read │ ├── posix-read.c │ ├── posix-write │ ├── posix-write.c │ ├── util.c │ └── util.h ├── darshan ├── README.txt ├── fidgetspinner │ ├── fidgetspinnerA-aurora.qsub │ ├── fidgetspinnerA.c │ ├── fidgetspinnerB-aurora.qsub │ └── fidgetspinnerB.c ├── helloworld │ ├── helloworld-aurora.qsub │ └── helloworld.c └── warpdrive │ ├── warpdriveA-aurora.qsub │ ├── warpdriveA.c │ ├── warpdriveB-aurora.qsub │ └── warpdriveB.c ├── h5bench ├── README.md ├── atpsec.json ├── h5bench-aurora.sh └── h5bench-perlmutter.sh ├── hdf5 ├── Makefile ├── h5par-comparison.c ├── h5par_ex1a.c ├── h5par_ex1b.c ├── h5par_ex1c.c ├── h5par_ex2a.c ├── h5par_ex2b.c └── submit-aurora.pbs ├── hello-io ├── Makefile ├── hello-aurora.sh ├── hello-hdf5.c ├── hello-hdf5.pbs ├── hello-hdf5.sh ├── hello-mpiio-noncontig.c ├── hello-mpiio-view.c ├── hello-mpiio.c ├── hello-pnetcdf.c ├── hello-pnetcdf.sh └── submit-polaris.sh ├── ior ├── README.md ├── aurora │ ├── ior-pnetcdf.sh │ └── ior-simple.sh ├── ior-simple-ascent.sh ├── noncontig │ ├── noncontig-plot.py │ ├── noncontig-sweep.pbs │ ├── noncontig.conf │ └── noncontig.pbs ├── polaris │ ├── ior-noncontig-collective.sh │ ├── ior-noncontig-segments.sh │ ├── ior-pnetcdf.sh │ ├── ior-simple.sh │ └── ior-stripes.sh └── theta │ ├── ior-noncontig-collective.sh │ ├── ior-noncontig.sh │ └── ior-simple.sh ├── mpi2tutorial ├── .cvsignore ├── COPYRIGHT ├── Makefile ├── README ├── configure.ac ├── examples │ ├── Makefile │ ├── life │ │ ├── .cvsignore │ │ ├── Makefile.in │ │ ├── mlife-fence.c │ │ ├── mlife-io-mpiio.c │ │ ├── mlife-io-pnetcdf.c │ │ ├── mlife-io-stdout.c │ │ ├── mlife-io.h │ │ ├── mlife-pscw.c │ │ ├── mlife-pt2pt.c │ │ ├── mlife.c │ │ ├── mlife.h │ │ ├── mlife2d-fence.c │ │ ├── mlife2d-io-stdout.c │ │ ├── mlife2d-io-stdout1.c │ │ ├── mlife2d-pt2pt.c │ │ ├── mlife2d.c │ │ ├── mlife2d.h │ │ ├── mlife2df-fence.f │ │ ├── mlife2df-io-stdout.f │ │ ├── mlife2df-pt2pt.f │ │ ├── mlife2df.f │ │ ├── mlife2df.h │ │ ├── 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