├── .github └── workflows │ ├── ci.yml │ └── notebook-test.yml ├── .gitignore ├── LICENSE ├── MANIFEST.in ├── README.md ├── docs ├── Makefile ├── changelogs.md ├── conf.py ├── dms.rst ├── index.rst ├── make.bat ├── solvers.rst └── utils.rst ├── environment.yml ├── examples ├── amb+.ipynb ├── amh_b+.ipynb ├── banner.jpeg ├── diffusionEquation.ipynb ├── fourierMethod.ipynb ├── gray-scott.ipynb ├── modelB.ipynb └── modelB_ST.ipynb ├── makefile ├── pygl ├── __init__.py ├── dms.pyx ├── modelB_correlations.ipynb ├── models.py ├── solvers.pyx ├── tests │ ├── installTests.py │ └── testNotebooks.py └── utils.pyx ├── requirements.txt ├── setup.py └── tests ├── installTests.py └── testNotebooks.py /.github/workflows/ci.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/.github/workflows/ci.yml -------------------------------------------------------------------------------- /.github/workflows/notebook-test.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/.github/workflows/notebook-test.yml -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/LICENSE -------------------------------------------------------------------------------- /MANIFEST.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/MANIFEST.in -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/README.md -------------------------------------------------------------------------------- /docs/Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/Makefile -------------------------------------------------------------------------------- /docs/changelogs.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/changelogs.md -------------------------------------------------------------------------------- /docs/conf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/conf.py -------------------------------------------------------------------------------- /docs/dms.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/dms.rst -------------------------------------------------------------------------------- /docs/index.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/index.rst -------------------------------------------------------------------------------- /docs/make.bat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/make.bat -------------------------------------------------------------------------------- /docs/solvers.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/solvers.rst -------------------------------------------------------------------------------- /docs/utils.rst: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/docs/utils.rst -------------------------------------------------------------------------------- /environment.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/environment.yml -------------------------------------------------------------------------------- /examples/amb+.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/amb+.ipynb -------------------------------------------------------------------------------- /examples/amh_b+.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/amh_b+.ipynb -------------------------------------------------------------------------------- /examples/banner.jpeg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/banner.jpeg -------------------------------------------------------------------------------- /examples/diffusionEquation.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/diffusionEquation.ipynb -------------------------------------------------------------------------------- /examples/fourierMethod.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/fourierMethod.ipynb -------------------------------------------------------------------------------- /examples/gray-scott.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/gray-scott.ipynb -------------------------------------------------------------------------------- /examples/modelB.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/modelB.ipynb -------------------------------------------------------------------------------- /examples/modelB_ST.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/examples/modelB_ST.ipynb -------------------------------------------------------------------------------- /makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/makefile -------------------------------------------------------------------------------- /pygl/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/__init__.py -------------------------------------------------------------------------------- /pygl/dms.pyx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/dms.pyx -------------------------------------------------------------------------------- /pygl/modelB_correlations.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/modelB_correlations.ipynb -------------------------------------------------------------------------------- /pygl/models.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/models.py -------------------------------------------------------------------------------- /pygl/solvers.pyx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/solvers.pyx -------------------------------------------------------------------------------- /pygl/tests/installTests.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/tests/installTests.py -------------------------------------------------------------------------------- /pygl/tests/testNotebooks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/tests/testNotebooks.py -------------------------------------------------------------------------------- /pygl/utils.pyx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/pygl/utils.pyx -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- 1 | numpy 2 | jupyter 3 | matplotlib 4 | cython 5 | scipy 6 | -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/setup.py -------------------------------------------------------------------------------- /tests/installTests.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/tests/installTests.py -------------------------------------------------------------------------------- /tests/testNotebooks.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rajeshrinet/pygl/HEAD/tests/testNotebooks.py --------------------------------------------------------------------------------