├── Makefile ├── README ├── README.md ├── SampleData ├── make_tarball ├── seeds ├── yeast.dict.authors ├── yeast.dict.proteins ├── yeast.dict.words ├── yeast.ppi ├── yeast.pubs └── yeast.pubs.domains └── src ├── cpp ├── align.cpp ├── component.h ├── config.cpp ├── config.h ├── corpus.cpp ├── corpus.h ├── entropy.cpp ├── hdp.cpp ├── hungarian.c ├── hungarian.cpp ├── hungarian.h ├── jsd.cpp ├── jsd_pair.cpp ├── knn.cpp ├── knn_2part.cpp ├── link_lda.cpp ├── link_lda_backup.cpp ├── links.cpp ├── links.h ├── model.cpp ├── model.h ├── options.cpp ├── options.h ├── soft_hungarian_match.cpp ├── sort_kl.cpp ├── stats.cpp ├── stats.h ├── test.cpp ├── test_rand.cpp ├── tst.cpp ├── util.cpp └── util.h ├── python ├── BeautifulSoup.py ├── BeautifulSoup.pyc ├── add_lda_feats_svm.py ├── combine_topic_distr_by_domain.py ├── compute_mse.py ├── convert_frank_kmeans_to_blocklda_topics.py ├── convert_link_lda.py ├── convert_linklda_to_svm.py ├── convert_mark.py ├── count_labels.py ├── get_diff_topic_1_2.py ├── make_na_targets.py ├── make_seed_topic_labels.py ├── make_splits.py ├── node_labels.py ├── pos_histogram.py ├── rand_split.py ├── tokenize.py ├── tokenize.pyc └── view_model.py └── run-scripts ├── EMNLPProject ├── run.sh └── svm.sh ├── MarkDredze ├── run_slda.sh └── tokenize.sh ├── MultiDomain ├── make_domains.py └── run-jake.sh ├── TaeBlogData ├── get_comment_volume.pl ├── get_max_min.pl ├── normalize_volume_cnts.pl ├── run_cmnts.sh ├── run_cmt_vol.sh └── tokenize.sh └── Yeast └── run_regularization.sh /Makefile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rbalasub/jigsaw/HEAD/Makefile -------------------------------------------------------------------------------- /README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rbalasub/jigsaw/HEAD/README 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