├── Results ├── Spatial_Transcriptomic_Heart │ ├── heart_w5_sample1_dwls.txt │ ├── heart_w5_sample2_dwls.txt │ ├── heart_w5_sample3_dwls.txt │ ├── heart_w5_sample4_dwls.txt │ ├── heart_w6_sample10_dwls.txt │ ├── heart_w6_sample11_dwls.txt │ ├── heart_w6_sample12_dwls.txt │ ├── heart_w6_sample13_dwls.txt │ ├── heart_w6_sample5_dwls.txt │ ├── heart_w6_sample6_dwls.txt │ ├── heart_w6_sample7_dwls.txt │ ├── heart_w6_sample8_dwls.txt │ ├── heart_w6_sample9_dwls.txt │ ├── heart_w9_sample14_dwls.txt │ ├── heart_w9_sample15_dwls.txt │ ├── heart_w9_sample16_dwls.txt │ ├── heart_w9_sample17_dwls.txt │ ├── heart_w9_sample18_dwls.txt │ └── heart_w9_sample19_dwls.txt └── Visium_Brain │ ├── visium_brain_1-10.pdf │ ├── visium_brain_11-21.pdf │ └── visium_brain_proportion.txt ├── codes ├── Heart_ST_tutorial_spatialDWLS.Rmd ├── Visium_Brain_spatialDWLS.Rmd └── seqFISH_plus_deconvolution.Rmd └── datasets ├── heart_development_ST ├── all_cells_count_matrix_filtered.tsv.zip ├── ens2symbol.txt ├── sample10_w6_exp.txt ├── sample10_w6_loc.txt ├── sc_meta.txt └── sig_exp.RData ├── mouse_brain_visium ├── sig_ct_exp.RData └── tissue_positions_list.csv └── simulate_data_seqFISH_plus ├── groudtruth_cell_percentage.txt ├── raw_somatosensory_sc_exp.txt.zip ├── simulated_seqFISH_grid_norm_exp.txt ├── simulated_seqFISH_grid_norm_exp.txt.zip └── somatosensory_sc_labels.txt /Results/Spatial_Transcriptomic_Heart/heart_w5_sample1_dwls.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/rdong08/spatialDWLS_dataset/HEAD/Results/Spatial_Transcriptomic_Heart/heart_w5_sample1_dwls.txt -------------------------------------------------------------------------------- /Results/Spatial_Transcriptomic_Heart/heart_w5_sample2_dwls.txt: -------------------------------------------------------------------------------- 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