├── LICENSE ├── commands ├── run_cradle.sh └── run_mimic.sh ├── cradle ├── cradle_disease_name_gpt_summary.jsonl ├── cradle_medication_name_gpt_summary.jsonl └── cradle_procedure_name_gpt_summary.jsonl ├── mesh.txt ├── mimic ├── hyperedges-mimic-text-test-example.jsonl ├── hyperedges-mimic-text-train-example.jsonl ├── hyperedges-mimic-text-valid-example.jsonl ├── mimic_disease_id_name_gpt_summary.jsonl ├── mimic_prescription_name_gpt_summary.jsonl └── mimic_procedure_id_name_gpt_summary.jsonl ├── model_src ├── commands │ ├── run_cradle.sh │ └── run_mimic.sh ├── main.py ├── model.py ├── trainer.py └── utils.py ├── prompt_gpt_def.py ├── query_drugbank.py ├── query_pubmed.py └── readme.md /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ritaranx/RAM-EHR/HEAD/LICENSE -------------------------------------------------------------------------------- /commands/run_cradle.sh: 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