├── .Rbuildignore ├── .github ├── .gitignore └── workflows │ ├── R-CMD-check.yaml │ └── pkgdown.yaml ├── .gitignore ├── .lintr ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── NEWS.md ├── R ├── actions.R ├── ae.R ├── ae_workload.R ├── article.R ├── articles.R ├── assignments.R ├── author-email.R ├── convert_landing.R ├── crossref.R ├── current.R ├── doi.R ├── email.R ├── git.R ├── id.R ├── issue.R ├── late.R ├── llm_copyedit.R ├── match.R ├── path.R ├── publish.R ├── report.R ├── reviewers-utils.R ├── reviewers.R ├── rfc822.R ├── rj.R ├── status.R ├── submissions.R ├── summary_plots.R ├── sysdata.rda └── utils.R ├── README.md ├── README.nm ├── _pkgdown.yml ├── data-raw └── keywords_list_concat.R ├── inst ├── RJwrapper_template.tex ├── associate-editors.csv ├── auth │ └── client_id.json ├── editors.csv ├── examples │ └── example.R ├── issue_template.Rmd ├── keywords-list.csv ├── pandoc-metadata │ └── RJournal.sty ├── sample │ ├── Accepted │ │ ├── 2012-01 │ │ │ └── DESCRIPTION │ │ └── 2012-02 │ │ │ └── DESCRIPTION │ ├── Rejected │ │ ├── 2012-03 │ │ │ └── DESCRIPTION │ │ └── 2012-04 │ │ │ └── DESCRIPTION │ └── Submitted │ │ └── 2012-05 │ │ └── DESCRIPTION └── templates │ ├── accept.txt │ ├── acknowledge.txt │ ├── acknowledge_revision.txt │ ├── ae-invitation.txt │ ├── gmail_acknowledge.txt │ ├── gmail_proofing.txt │ ├── issue.txt │ ├── online.txt │ ├── reject.txt │ ├── reject_format.txt │ ├── resubmission.txt │ ├── review-template.txt │ ├── review-updated.txt │ ├── review.txt │ ├── revision-major.txt │ ├── revision-minor.txt │ └── withdraw.txt ├── man ├── AEs.Rd ├── acknowledge_revision.Rd ├── acknowledge_submission.Rd ├── action.Rd ├── actionable_articles.Rd ├── active_articles.Rd ├── add_ae.Rd ├── add_review.Rd ├── add_reviewer.Rd ├── address.Rd ├── ae_workload.Rd ├── article.Rd ├── article_status_plot.Rd ├── assignments.Rd ├── author_emails.Rd ├── build_latex.Rd ├── corr_author.Rd ├── decline_reviewer.Rd ├── email_template.Rd ├── email_text.Rd ├── filter_status.Rd ├── future_ids.Rd ├── get_accepted_but_not_online.Rd ├── get_article_keywords.Rd ├── get_articles_path.Rd ├── get_md_from_pdf.Rd ├── get_reviewer_keywords.Rd ├── get_reviewers.Rd ├── get_submissions.Rd ├── git_user.Rd ├── invite_reviewers.Rd ├── late_aes.Rd ├── late_reviewers.Rd ├── llm_copyedit.Rd ├── make_proof.Rd ├── match_keywords.Rd ├── need_decision.Rd ├── need_reviewers.Rd ├── new_id.Rd ├── online_metadata.Rd ├── online_metadata_for_article.Rd ├── parse_address_list.Rd ├── proofing.Rd ├── publish_article.Rd ├── publish_issue.Rd ├── publish_news.Rd ├── reexports.Rd ├── report.Rd ├── reviewer_status.Rd ├── reviewer_summary.Rd ├── rj.Rd ├── set_articles_path.Rd ├── status.Rd ├── summarise_articles.Rd ├── tabulate_articles.Rd ├── time_to_accept_plot.Rd ├── update_status.Rd ├── valid_reviewer_status.Rd └── valid_status.Rd ├── rj.Rproj ├── tests ├── test-all.R └── testthat │ ├── test-actions.R │ ├── test-id.r │ ├── test-rfc822.r │ ├── test-status.r │ └── valid-article.dcf └── 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