├── .Rbuildignore ├── .github └── workflows │ └── R-CMD-check.yaml ├── .gitignore ├── CITATION.cff ├── DESCRIPTION ├── NAMESPACE ├── NEWS ├── R ├── BinSeg_one_func_minseglen.R ├── CROPS.R ├── CptReg.R ├── PELT_one_func_minseglen.R ├── SegNeigh_one_func_minseglen.R ├── class_input.R ├── cpt.R ├── cpt.class.R ├── data_input.R ├── decision.R ├── exp.R ├── fit.R ├── gamma.R ├── multiple.nonparametric.R ├── multiple.norm.R ├── penalty_decision.R ├── poisson.R ├── range_of_penalties.R ├── single.nonparametric.R ├── single.norm.R └── zzz.R ├── changepoint.Rproj ├── data ├── HC1.RData ├── Lai2005fig3.RData ├── Lai2005fig4.RData ├── ftse100.RData └── wave.c44137.RData ├── inst └── CITATION ├── man ├── BINSEG.Rd ├── HC1.Rd ├── Lai2005fig3.Rd ├── Lai2005fig4.Rd ├── PELT.Rd ├── changepoint-package.Rd ├── class_input.Rd ├── coef-methods.Rd ├── cpt-class.Rd ├── cpt.mean.Rd ├── cpt.meanvar.Rd ├── cpt.range-class.Rd ├── cpt.reg-class.Rd ├── cpt.reg.Rd ├── cpt.var.Rd ├── cpts--methods.Rd ├── cpts-.Rd ├── cpts-methods.Rd ├── cpts.Rd ├── cpts.full--methods.Rd ├── cpts.full-.Rd ├── cpts.full-methods.Rd ├── cpts.full.Rd ├── cpts.ts-methods.Rd ├── cpts.ts.Rd ├── cpttype--methods.Rd ├── cpttype-.Rd ├── cpttype-methods.Rd ├── cpttype.Rd ├── data.set--methods.Rd ├── data.set-.Rd ├── data.set-methods.Rd ├── data.set.Rd ├── data.set.ts-methods.Rd ├── data.set.ts.Rd ├── decision.Rd ├── distribution--methods.Rd ├── distribution-.Rd ├── distribution-methods.Rd ├── distribution.Rd ├── fitted-methods.Rd ├── ftse100.Rd ├── likelihood-methods.Rd ├── likelihood.Rd ├── logLik-methods.Rd ├── method--methods.Rd ├── method-.Rd ├── method-methods.Rd ├── method.Rd ├── minseglen--methods.Rd ├── minseglen-.Rd ├── minseglen-methods.Rd ├── minseglen.Rd ├── ncpts-methods.Rd ├── ncpts.Rd ├── ncpts.max--methods.Rd ├── ncpts.max-.Rd ├── ncpts.max-methods.Rd ├── ncpts.max.Rd ├── nseg-methods.Rd ├── nseg.Rd ├── param-methods.Rd ├── param.Rd ├── param.est--methods.Rd ├── param.est-.Rd ├── param.est-methods.Rd ├── param.est.Rd ├── pen.type--methods.Rd ├── pen.type-.Rd ├── pen.type-methods.Rd ├── pen.type.Rd ├── pen.value--methods.Rd ├── pen.value-.Rd ├── pen.value-methods.Rd ├── pen.value.Rd ├── pen.value.full--methods.Rd ├── pen.value.full-.Rd ├── pen.value.full-methods.Rd ├── pen.value.full.Rd ├── penalty_decision.Rd ├── plot-methods.Rd ├── residuals-methods.Rd ├── seg.len-methods.Rd ├── seg.len.Rd ├── show-methods.Rd ├── summary-methods.Rd ├── test.stat--methods.Rd ├── test.stat-.Rd ├── test.stat-methods.Rd ├── test.stat.Rd └── wave.c44137.Rd ├── src ├── BinSeg_one_func_minseglen.c ├── C_cptreg.c ├── Makevars ├── PELT_one_func_minseglen.c ├── changepoint_init.c └── cost_general_functions.c └── tests ├── figs └── plot-diagnostic-true-tests │ ├── diagnostic-plot-default.svg │ └── diagnostic-plot-histogram.svg ├── testthat.R └── testthat ├── Rplots.pdf ├── _snaps └── plot │ ├── diagnostic-plot-default.svg │ └── diagnostic-plot-histogram.svg ├── test-cptmean.R ├── test-cptmeanvar.R ├── 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