├── .gitignore ├── README-NOT.md ├── README.md ├── _config.yml ├── _layouts ├── default.html ├── nodisqus.html └── post.html ├── _posts └── 2014-03-02-Useful-Workflows.md ├── _site ├── 2014 │ └── 03 │ │ └── 30 │ │ └── Useful-Workflows.html ├── README.md ├── assets │ ├── css │ │ ├── bootstrap.css │ │ ├── font-awesome.min.css │ │ └── main.css │ ├── fonts │ │ ├── FontAwesome.otf │ │ ├── fontawesome-webfont.eot │ │ ├── fontawesome-webfont.svg │ │ ├── fontawesome-webfont.ttf │ │ ├── fontawesome-webfont.woff │ │ ├── glyphicons-halflings-regular.eot │ │ ├── glyphicons-halflings-regular.svg │ │ ├── glyphicons-halflings-regular.ttf │ │ └── glyphicons-halflings-regular.woff │ ├── img │ │ ├── 01.jpg │ │ ├── 01.png │ │ ├── 01jpg.jpg │ │ ├── 02.jpg │ │ ├── 03.jpg │ │ ├── 04.jpg │ │ ├── 05.jpg │ │ ├── 06.jpg │ │ ├── 07.png │ │ ├── 08.png │ │ ├── iphone.png │ │ ├── key.png │ │ ├── workflow01.png │ │ ├── workflow1.png │ │ ├── workflow1b.png │ │ ├── workflow2.png │ │ └── workflow3.png │ └── js │ │ ├── bootstrap.js │ │ └── chart.js ├── contributors │ └── index.html ├── correctLinks.R ├── index.html ├── reproducibility-guide.Rproj └── sections │ ├── collaborationGuide │ └── index.html │ ├── dataStorage │ └── index.html │ ├── introduction │ └── index.html │ ├── metaData │ └── index.html │ ├── references │ └── index.html │ ├── tools │ └── index.html │ ├── versionControl │ └── index.html │ ├── workflows │ ├── index.html │ ├── workflow1 │ │ └── index.html │ ├── workflow2 │ │ └── index.html │ ├── workflow3 │ │ └── index.html │ └── workflow4 │ │ └── index.html │ └── writingCode │ └── index.html ├── assets ├── css │ ├── bootstrap.css │ ├── font-awesome.min.css │ └── main.css ├── fonts │ ├── FontAwesome.otf │ ├── fontawesome-webfont.eot │ ├── fontawesome-webfont.svg │ ├── fontawesome-webfont.ttf │ ├── fontawesome-webfont.woff │ ├── glyphicons-halflings-regular.eot │ ├── glyphicons-halflings-regular.svg │ ├── glyphicons-halflings-regular.ttf │ └── glyphicons-halflings-regular.woff ├── img │ ├── 01.jpg │ ├── 01.png │ ├── 01jpg.jpg │ ├── 02.jpg │ ├── 03.jpg │ ├── 04.jpg │ ├── 05.jpg │ ├── 06.jpg │ ├── 07.png │ ├── 08.png │ ├── 10.png │ ├── 11.png │ ├── 12.png │ ├── iphone.png │ ├── key.png │ ├── workflow01.png │ ├── workflow1.png │ ├── workflow1b.png │ ├── workflow2.png │ └── workflow3.png └── js │ ├── bootstrap.js │ └── chart.js ├── contributors └── index.md ├── correctLinks.R ├── index.html └── sections ├── checklist └── index.md ├── collaborationGuide └── index.md ├── copyrightLicensing └── index.md ├── dataSharing └── index.md ├── dataStorage └── index.md ├── introduction └── index.md ├── metaData └── index.md ├── references └── index.md ├── tools └── index.md ├── versionControl └── index.md ├── workflows ├── index.md ├── workflow1 │ └── index.md ├── workflow2 │ └── index.md ├── workflow3 │ └── index.md └── workflow4 │ └── index.md └── writingCode └── index.md /.gitignore: -------------------------------------------------------------------------------- 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