├── LICENSE ├── README.md ├── csvsql.py └── iris.csv /LICENSE: -------------------------------------------------------------------------------- 1 | GNU GENERAL PUBLIC LICENSE 2 | Version 2, June 1991 3 | 4 | Copyright (C) 1989, 1991 Free Software Foundation, Inc., 5 | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA 6 | Everyone is permitted to copy and distribute verbatim copies 7 | of this license document, but changing it is not allowed. 8 | 9 | Preamble 10 | 11 | The licenses for most software are designed to take away your 12 | freedom to share and change it. By contrast, the GNU General Public 13 | License is intended to guarantee your freedom to share and change free 14 | software--to make sure the software is free for all its users. This 15 | General Public License applies to most of the Free Software 16 | Foundation's software and to any other program whose authors commit to 17 | using it. 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It is safest 289 | to attach them to the start of each source file to most effectively 290 | convey the exclusion of warranty; and each file should have at least 291 | the "copyright" line and a pointer to where the full notice is found. 292 | 293 | {description} 294 | Copyright (C) {year} {fullname} 295 | 296 | This program is free software; you can redistribute it and/or modify 297 | it under the terms of the GNU General Public License as published by 298 | the Free Software Foundation; either version 2 of the License, or 299 | (at your option) any later version. 300 | 301 | This program is distributed in the hope that it will be useful, 302 | but WITHOUT ANY WARRANTY; without even the implied warranty of 303 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the 304 | GNU General Public License for more details. 305 | 306 | You should have received a copy of the GNU General Public License along 307 | with this program; if not, write to the Free Software Foundation, Inc., 308 | 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. 309 | 310 | Also add information on how to contact you by electronic and paper mail. 311 | 312 | If the program is interactive, make it output a short notice like this 313 | when it starts in an interactive mode: 314 | 315 | Gnomovision version 69, Copyright (C) year name of author 316 | Gnomovision comes with ABSOLUTELY NO WARRANTY; for details type `show w'. 317 | This is free software, and you are welcome to redistribute it 318 | under certain conditions; type `show c' for details. 319 | 320 | The hypothetical commands `show w' and `show c' should show the appropriate 321 | parts of the General Public License. Of course, the commands you use may 322 | be called something other than `show w' and `show c'; they could even be 323 | mouse-clicks or menu items--whatever suits your program. 324 | 325 | You should also get your employer (if you work as a programmer) or your 326 | school, if any, to sign a "copyright disclaimer" for the program, if 327 | necessary. Here is a sample; alter the names: 328 | 329 | Yoyodyne, Inc., hereby disclaims all copyright interest in the program 330 | `Gnomovision' (which makes passes at compilers) written by James Hacker. 331 | 332 | {signature of Ty Coon}, 1 April 1989 333 | Ty Coon, President of Vice 334 | 335 | This General Public License does not permit incorporating your program into 336 | proprietary programs. If your program is a subroutine library, you may 337 | consider it more useful to permit linking proprietary applications with the 338 | library. If this is what you want to do, use the GNU Lesser General 339 | Public License instead of this License. 340 | 341 | -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- 1 | # csvsql 2 | 3 | Query CSV files using SQL. 4 | 5 | ## How to use it 6 | 7 | csvfile -f filename -s sql 8 | 9 | ## How it works 10 | 11 | The script loads CSV files into a SQLite3 database and queries them. It saves the database do disk, so the CSV files are actually cached. It uses Adler32 checksums to check if the data cached on the SQLite DB is the same as in disk. 12 | 13 | The CSV will have its filename as table name, so for instance you can query iris.csv as table iris. 14 | -------------------------------------------------------------------------------- /csvsql.py: -------------------------------------------------------------------------------- 1 | #!/usr/bin/env python 2 | import pandas as pd 3 | import ctypes 4 | import sqlite3 5 | import sys 6 | import zlib 7 | import argparse 8 | import csv 9 | import os 10 | 11 | # Always pass the database as the first argument. 12 | 13 | def signed_checksum(data): 14 | return ctypes.c_uint32(zlib.adler32(data)).value 15 | 16 | def open_connection(): 17 | conn = sqlite3.connect('csvsql.db') 18 | cur = conn.cursor() 19 | cur.execute('CREATE TABLE IF NOT EXISTS checksums (filename TEXT, checksum INTEGER)') 20 | conn.commit() 21 | return conn 22 | 23 | def needs_update(db, filename, checksum): 24 | cur = db.cursor() 25 | cur.execute('SELECT checksum FROM checksums WHERE filename=?', [filename]) 26 | rows = cur.fetchall() 27 | if len(rows) == 0: 28 | cur.execute('INSERT INTO checksums VALUES (?, ?)', [filename, checksum]) 29 | return True 30 | if rows[0][0] == checksum: 31 | return False 32 | return True 33 | 34 | def update_db(db, filename): 35 | with open(filename, 'rb') as input_file: 36 | data = input_file.read() 37 | checksum = signed_checksum(filename) 38 | if needs_update(db, filename, checksum): 39 | df = pd.read_csv(filename) 40 | df.to_sql(filename[0:-4], db) 41 | 42 | def main(argv): 43 | parser = argparse.ArgumentParser() 44 | parser.add_argument('-f', dest='input_filename', action='store', required=True) 45 | parser.add_argument('-s', dest='sql_command', action='store', required=True) 46 | options = parser.parse_args(argv) 47 | 48 | if not os.path.isfile(options.input_filename): 49 | sys.stderr.write('File {0} does not exist.'.format(options.input_filename)) 50 | return 51 | 52 | conn = open_connection() 53 | update_db(conn, options.input_filename) 54 | cur = conn.cursor() 55 | cur.execute(options.sql_command) 56 | for row in cur: 57 | print row 58 | 59 | main(sys.argv[1:]) 60 | -------------------------------------------------------------------------------- /iris.csv: -------------------------------------------------------------------------------- 1 | Sepal Length,Sepal Width,Petal Length,Petal Width,Species 2 | 5.1,3.5,1.4,0.2,setosa 3 | 4.9,3.0,1.4,0.2,setosa 4 | 4.7,3.2,1.3,0.2,setosa 5 | 4.6,3.1,1.5,0.2,setosa 6 | 5.0,3.6,1.4,0.2,setosa 7 | 5.4,3.9,1.7,0.4,setosa 8 | 4.6,3.4,1.4,0.3,setosa 9 | 5.0,3.4,1.5,0.2,setosa 10 | 4.4,2.9,1.4,0.2,setosa 11 | 4.9,3.1,1.5,0.1,setosa 12 | 5.4,3.7,1.5,0.2,setosa 13 | 4.8,3.4,1.6,0.2,setosa 14 | 4.8,3.0,1.4,0.1,setosa 15 | 4.3,3.0,1.1,0.1,setosa 16 | 5.8,4.0,1.2,0.2,setosa 17 | 5.7,4.4,1.5,0.4,setosa 18 | 5.4,3.9,1.3,0.4,setosa 19 | 5.1,3.5,1.4,0.3,setosa 20 | 5.7,3.8,1.7,0.3,setosa 21 | 5.1,3.8,1.5,0.3,setosa 22 | 5.4,3.4,1.7,0.2,setosa 23 | 5.1,3.7,1.5,0.4,setosa 24 | 4.6,3.6,1.0,0.2,setosa 25 | 5.1,3.3,1.7,0.5,setosa 26 | 4.8,3.4,1.9,0.2,setosa 27 | 5.0,3.0,1.6,0.2,setosa 28 | 5.0,3.4,1.6,0.4,setosa 29 | 5.2,3.5,1.5,0.2,setosa 30 | 5.2,3.4,1.4,0.2,setosa 31 | 4.7,3.2,1.6,0.2,setosa 32 | 4.8,3.1,1.6,0.2,setosa 33 | 5.4,3.4,1.5,0.4,setosa 34 | 5.2,4.1,1.5,0.1,setosa 35 | 5.5,4.2,1.4,0.2,setosa 36 | 4.9,3.1,1.5,0.1,setosa 37 | 5.0,3.2,1.2,0.2,setosa 38 | 5.5,3.5,1.3,0.2,setosa 39 | 4.9,3.1,1.5,0.1,setosa 40 | 4.4,3.0,1.3,0.2,setosa 41 | 5.1,3.4,1.5,0.2,setosa 42 | 5.0,3.5,1.3,0.3,setosa 43 | 4.5,2.3,1.3,0.3,setosa 44 | 4.4,3.2,1.3,0.2,setosa 45 | 5.0,3.5,1.6,0.6,setosa 46 | 5.1,3.8,1.9,0.4,setosa 47 | 4.8,3.0,1.4,0.3,setosa 48 | 5.1,3.8,1.6,0.2,setosa 49 | 4.6,3.2,1.4,0.2,setosa 50 | 5.3,3.7,1.5,0.2,setosa 51 | 5.0,3.3,1.4,0.2,setosa 52 | 7.0,3.2,4.7,1.4,versicolor 53 | 6.4,3.2,4.5,1.5,versicolor 54 | 6.9,3.1,4.9,1.5,versicolor 55 | 5.5,2.3,4.0,1.3,versicolor 56 | 6.5,2.8,4.6,1.5,versicolor 57 | 5.7,2.8,4.5,1.3,versicolor 58 | 6.3,3.3,4.7,1.6,versicolor 59 | 4.9,2.4,3.3,1.0,versicolor 60 | 6.6,2.9,4.6,1.3,versicolor 61 | 5.2,2.7,3.9,1.4,versicolor 62 | 5.0,2.0,3.5,1.0,versicolor 63 | 5.9,3.0,4.2,1.5,versicolor 64 | 6.0,2.2,4.0,1.0,versicolor 65 | 6.1,2.9,4.7,1.4,versicolor 66 | 5.6,2.9,3.6,1.3,versicolor 67 | 6.7,3.1,4.4,1.4,versicolor 68 | 5.6,3.0,4.5,1.5,versicolor 69 | 5.8,2.7,4.1,1.0,versicolor 70 | 6.2,2.2,4.5,1.5,versicolor 71 | 5.6,2.5,3.9,1.1,versicolor 72 | 5.9,3.2,4.8,1.8,versicolor 73 | 6.1,2.8,4.0,1.3,versicolor 74 | 6.3,2.5,4.9,1.5,versicolor 75 | 6.1,2.8,4.7,1.2,versicolor 76 | 6.4,2.9,4.3,1.3,versicolor 77 | 6.6,3.0,4.4,1.4,versicolor 78 | 6.8,2.8,4.8,1.4,versicolor 79 | 6.7,3.0,5.0,1.7,versicolor 80 | 6.0,2.9,4.5,1.5,versicolor 81 | 5.7,2.6,3.5,1.0,versicolor 82 | 5.5,2.4,3.8,1.1,versicolor 83 | 5.5,2.4,3.7,1.0,versicolor 84 | 5.8,2.7,3.9,1.2,versicolor 85 | 6.0,2.7,5.1,1.6,versicolor 86 | 5.4,3.0,4.5,1.5,versicolor 87 | 6.0,3.4,4.5,1.6,versicolor 88 | 6.7,3.1,4.7,1.5,versicolor 89 | 6.3,2.3,4.4,1.3,versicolor 90 | 5.6,3.0,4.1,1.3,versicolor 91 | 5.5,2.5,4.0,1.3,versicolor 92 | 5.5,2.6,4.4,1.2,versicolor 93 | 6.1,3.0,4.6,1.4,versicolor 94 | 5.8,2.6,4.0,1.2,versicolor 95 | 5.0,2.3,3.3,1.0,versicolor 96 | 5.6,2.7,4.2,1.3,versicolor 97 | 5.7,3.0,4.2,1.2,versicolor 98 | 5.7,2.9,4.2,1.3,versicolor 99 | 6.2,2.9,4.3,1.3,versicolor 100 | 5.1,2.5,3.0,1.1,versicolor 101 | 5.7,2.8,4.1,1.3,versicolor 102 | 6.3,3.3,6.0,2.5,virginica 103 | 5.8,2.7,5.1,1.9,virginica 104 | 7.1,3.0,5.9,2.1,virginica 105 | 6.3,2.9,5.6,1.8,virginica 106 | 6.5,3.0,5.8,2.2,virginica 107 | 7.6,3.0,6.6,2.1,virginica 108 | 4.9,2.5,4.5,1.7,virginica 109 | 7.3,2.9,6.3,1.8,virginica 110 | 6.7,2.5,5.8,1.8,virginica 111 | 7.2,3.6,6.1,2.5,virginica 112 | 6.5,3.2,5.1,2.0,virginica 113 | 6.4,2.7,5.3,1.9,virginica 114 | 6.8,3.0,5.5,2.1,virginica 115 | 5.7,2.5,5.0,2.0,virginica 116 | 5.8,2.8,5.1,2.4,virginica 117 | 6.4,3.2,5.3,2.3,virginica 118 | 6.5,3.0,5.5,1.8,virginica 119 | 7.7,3.8,6.7,2.2,virginica 120 | 7.7,2.6,6.9,2.3,virginica 121 | 6.0,2.2,5.0,1.5,virginica 122 | 6.9,3.2,5.7,2.3,virginica 123 | 5.6,2.8,4.9,2.0,virginica 124 | 7.7,2.8,6.7,2.0,virginica 125 | 6.3,2.7,4.9,1.8,virginica 126 | 6.7,3.3,5.7,2.1,virginica 127 | 7.2,3.2,6.0,1.8,virginica 128 | 6.2,2.8,4.8,1.8,virginica 129 | 6.1,3.0,4.9,1.8,virginica 130 | 6.4,2.8,5.6,2.1,virginica 131 | 7.2,3.0,5.8,1.6,virginica 132 | 7.4,2.8,6.1,1.9,virginica 133 | 7.9,3.8,6.4,2.0,virginica 134 | 6.4,2.8,5.6,2.2,virginica 135 | 6.3,2.8,5.1,1.5,virginica 136 | 6.1,2.6,5.6,1.4,virginica 137 | 7.7,3.0,6.1,2.3,virginica 138 | 6.3,3.4,5.6,2.4,virginica 139 | 6.4,3.1,5.5,1.8,virginica 140 | 6.0,3.0,4.8,1.8,virginica 141 | 6.9,3.1,5.4,2.1,virginica 142 | 6.7,3.1,5.6,2.4,virginica 143 | 6.9,3.1,5.1,2.3,virginica 144 | 5.8,2.7,5.1,1.9,virginica 145 | 6.8,3.2,5.9,2.3,virginica 146 | 6.7,3.3,5.7,2.5,virginica 147 | 6.7,3.0,5.2,2.3,virginica 148 | 6.3,2.5,5.0,1.9,virginica 149 | 6.5,3.0,5.2,2.0,virginica 150 | 6.2,3.4,5.4,2.3,virginica 151 | 5.9,3.0,5.1,1.8,virginica 152 | --------------------------------------------------------------------------------