├── .github
    ├── .gitignore
    ├── actions
    │   └── install-ghostscript
    │   │   └── action.yml
    ├── workflows
    │   ├── update-examples.yaml
    │   ├── check-pandoc-daily.yaml
    │   └── R-CMD-check.yaml
    ├── CONTRIBUTING.md
    └── CODE_OF_CONDUCT.md
├── .gitattributes
├── LICENSE
├── tests
    ├── test-cran.R
    ├── test-ci.R
    ├── test-ci
    │   ├── test-page-breaks.Rmd
    │   ├── test-chrome.Rmd
    │   ├── test-outline.Rmd
    │   ├── test-revealjs.Rmd
    │   ├── test-formats.R
    │   ├── test-features.R
    │   └── test-chrome.R
    └── test-cran
    │   └── test-utils.R
├── .gitignore
├── man
    ├── figures
    │   └── logo.png
    ├── book_crc.Rd
    ├── find_chrome.Rd
    ├── business_card.Rd
    ├── html_letter.Rd
    ├── thesis_paged.Rd
    ├── jss_paged.Rd
    ├── html_resume.Rd
    ├── poster_relaxed.Rd
    ├── pagedown-package.Rd
    ├── html_paged.Rd
    └── chrome_print.Rd
├── inst
    ├── rmarkdown
    │   └── templates
    │   │   ├── html-letter
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   ├── business-card
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   ├── html-resume
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   ├── html-paged
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   ├── thesis-paged
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   ├── poster-relaxed
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   ├── jss-paged
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │       │   └── skeleton.Rmd
    │   │   └── poster-jacobs
    │   │       ├── template.yaml
    │   │       └── skeleton
    │   │           └── skeleton.Rmd
    ├── resources
    │   ├── css
    │   │   ├── crc-page.css
    │   │   ├── default-fonts.css
    │   │   ├── letter.css
    │   │   ├── jss-page.css
    │   │   ├── jss-fonts.css
    │   │   ├── poster-jacobs.css
    │   │   ├── default-page.css
    │   │   ├── poster-relaxed.css
    │   │   ├── default.css
    │   │   ├── crc.css
    │   │   ├── jss.css
    │   │   └── resume.css
    │   ├── js
    │   │   ├── paged-latest.js
    │   │   ├── chrome_print.js
    │   │   └── config.js
    │   ├── lua
    │   │   ├── footnotes.lua
    │   │   ├── uri-to-fn.lua
    │   │   ├── jss.lua
    │   │   └── loft.lua
    │   └── html
    │   │   ├── poster-jacobs.html
    │   │   ├── poster-relaxed.html
    │   │   ├── resume.html
    │   │   ├── paged.html
    │   │   ├── card.html
    │   │   ├── thesis.html
    │   │   └── jss_paged.html
    └── examples
    │   └── zh-CN.Rmd
├── .Rbuildignore
├── R
    ├── pagedown-package.R
    ├── card.R
    ├── resume.R
    ├── poster.R
    ├── utils.R
    └── paged.R
├── tools
    ├── update.R
    └── website.R
├── codecov.yml
├── NAMESPACE
├── pagedown.Rproj
├── LICENSE.md
├── DESCRIPTION
└── README.md


/.github/.gitignore:
--------------------------------------------------------------------------------
1 | *.html
2 | 


--------------------------------------------------------------------------------
/.gitattributes:
--------------------------------------------------------------------------------
1 | inst/resources/js/paged.js linguist-vendored
2 | 


--------------------------------------------------------------------------------
/LICENSE:
--------------------------------------------------------------------------------
1 | YEAR: 2023
2 | COPYRIGHT HOLDER: pagedown authors
3 | 


--------------------------------------------------------------------------------
/tests/test-cran.R:
--------------------------------------------------------------------------------
1 | testit::test_pkg('pagedown', 'test-cran')
2 | 


--------------------------------------------------------------------------------
/.gitignore:
--------------------------------------------------------------------------------
1 | .Rproj.user
2 | .Rhistory
3 | .RData
4 | .Ruserdata
5 | 


--------------------------------------------------------------------------------
/man/figures/logo.png:
--------------------------------------------------------------------------------
https://raw.githubusercontent.com/rstudio/pagedown/HEAD/man/figures/logo.png


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/html-letter/template.yaml:
--------------------------------------------------------------------------------
1 | name: HTML Letter
2 | description: >
3 |    Create a letter in HTML.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/.Rbuildignore:
--------------------------------------------------------------------------------
1 | ^\.travis\.yml$
2 | ^.*\.Rproj$
3 | ^\.Rproj\.user$
4 | ^tools$
5 | inst/examples$
6 | ^codecov\.yml$
7 | ^\.github$
8 | ^LICENSE\.md$
9 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/business-card/template.yaml:
--------------------------------------------------------------------------------
1 | name: Business Card
2 | description: >
3 |    Create a simple business card.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/R/pagedown-package.R:
--------------------------------------------------------------------------------
1 | #' @keywords internal
2 | #' @keywords internal
3 | "_PACKAGE"
4 | 
5 | ## usethis namespace: start
6 | ## usethis namespace: end
7 | NULL
8 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/html-resume/template.yaml:
--------------------------------------------------------------------------------
1 | name: HTML Resume
2 | description: >
3 |    An HTML resume that can be printed to PDF.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/html-paged/template.yaml:
--------------------------------------------------------------------------------
1 | name: Paged HTML Document
2 | description: >
3 |    Create a paged HTML document based on Paged.js.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/thesis-paged/template.yaml:
--------------------------------------------------------------------------------
1 | name: HTML Thesis Document
2 | description: >
3 |    Create a paged HTML thesis document based on Paged.js.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/tools/update.R:
--------------------------------------------------------------------------------
1 | xfun::in_dir('tools', {
2 |   # download paged.js
3 |   xfun::download_file('https://unpkg.com/pagedjs/dist/paged.polyfill.js', '../inst/resources/js/paged.js')
4 | })
5 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/poster-relaxed/template.yaml:
--------------------------------------------------------------------------------
1 | name: HTML Poster (the ReLaXed style)
2 | description: >
3 |    Create a poster in HTML with the ReLaXed style.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/inst/resources/css/crc-page.css:
--------------------------------------------------------------------------------
 1 | @page {
 2 |   size: 6in 9in;
 3 |   margin: 4pc 4pc 7pc 4pc;
 4 | }
 5 | 
 6 | /* page breaks */
 7 | div.abstract {
 8 |   page-break-before: always;
 9 | }
10 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/jss-paged/template.yaml:
--------------------------------------------------------------------------------
1 | name: Journal of Statistical Software HTML Document
2 | description: >
3 |    Create a paged HTML article for the Journal of Statistical Software.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/poster-jacobs/template.yaml:
--------------------------------------------------------------------------------
1 | name: HTML Poster (Jacobs University)
2 | description: >
3 |    A poster mimicking the LaTeX style created by the Computational Physics and Biophysics Group, Jacobs University.
4 | create_dir: FALSE
5 | 


--------------------------------------------------------------------------------
/codecov.yml:
--------------------------------------------------------------------------------
 1 | comment: false
 2 | 
 3 | coverage:
 4 |   status:
 5 |     project:
 6 |       default:
 7 |         target: auto
 8 |         threshold: 1%
 9 |         informational: true
10 |     patch:
11 |       default:
12 |         target: auto
13 |         threshold: 1%
14 |         informational: true
15 | 


--------------------------------------------------------------------------------
/tests/test-ci.R:
--------------------------------------------------------------------------------
 1 | # run tests on CI (these tests depend on Chrome)
 2 | 
 3 | print_pdf = function(input, output = tempfile(), ...) {
 4 |   chrome_print(input, output, ...)
 5 | }
 6 | 
 7 | if (!is.na(Sys.getenv('CI', NA))) {
 8 |   options(pagedown.remote.maxattempts = 100L)
 9 |   testit::test_pkg('pagedown', 'test-ci')
10 | }
11 | 


--------------------------------------------------------------------------------
/NAMESPACE:
--------------------------------------------------------------------------------
 1 | # Generated by roxygen2: do not edit by hand
 2 | 
 3 | export(book_crc)
 4 | export(business_card)
 5 | export(chrome_print)
 6 | export(find_chrome)
 7 | export(html_letter)
 8 | export(html_paged)
 9 | export(html_resume)
10 | export(jss_paged)
11 | export(poster_jacobs)
12 | export(poster_relaxed)
13 | export(thesis_paged)
14 | import(stats)
15 | import(utils)
16 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-page-breaks.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "Test page breaks"
 3 | output:
 4 |   pagedown::html_paged:
 5 |     self_contained: false
 6 |     css: null
 7 | ---
 8 | 
 9 | # First page
10 | 
11 | \newpage
12 | 
13 | # Second page
14 | 
15 | \pagebreak
16 | 
17 | # Third page {.page-break-after}
18 | 
19 | # Fourth page
20 | 
21 | # Fifth page {.page-break-before}
22 | 


--------------------------------------------------------------------------------
/.github/actions/install-ghostscript/action.yml:
--------------------------------------------------------------------------------
 1 | name: 'Install Ghostscript'
 2 | description: 'Install Ghostscript on all OS'
 3 | runs:
 4 |   using: "composite"
 5 |   steps:
 6 |       - if: ${{ runner.os == 'Linux' }}
 7 |         run: sudo apt-get install -y ghostscript
 8 |         shell: bash
 9 |       - if: ${{ runner.os == 'Windows' }}
10 |         run: choco install ghostscript
11 |         shell: pwsh
12 |       - if: ${{ runner.os == 'macOS' }}
13 |         run: brew install ghostscript
14 |         shell: bash
15 | 


--------------------------------------------------------------------------------
/pagedown.Rproj:
--------------------------------------------------------------------------------
 1 | Version: 1.0
 2 | ProjectId: 89f133bc-10c3-4fbf-926c-a1ce35320145
 3 | 
 4 | RestoreWorkspace: Default
 5 | SaveWorkspace: Default
 6 | AlwaysSaveHistory: Default
 7 | 
 8 | EnableCodeIndexing: Yes
 9 | UseSpacesForTab: Yes
10 | NumSpacesForTab: 2
11 | Encoding: UTF-8
12 | 
13 | RnwWeave: knitr
14 | LaTeX: pdfLaTeX
15 | 
16 | AutoAppendNewline: Yes
17 | StripTrailingWhitespace: Yes
18 | 
19 | BuildType: Package
20 | PackageInstallArgs: -v && Rscript -e "Rd2roxygen::rab(install=T,build=F)"
21 | PackageCheckArgs: --as-cran
22 | 
23 | SpellingDictionary: en_US
24 | 


--------------------------------------------------------------------------------
/man/book_crc.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/paged.R
 3 | \name{book_crc}
 4 | \alias{book_crc}
 5 | \title{Create a book for Chapman & Hall/CRC}
 6 | \usage{
 7 | book_crc(..., css = c("crc-page", "default-page", "default", "crc"))
 8 | }
 9 | \arguments{
10 | \item{..., css}{Arguments passed to \code{\link{html_paged}()}.}
11 | }
12 | \value{
13 | An R Markdown output format.
14 | }
15 | \description{
16 | This output format is similar to \code{\link{html_paged}}. The only
17 | difference is in the default stylesheets.
18 | }
19 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-chrome.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "Untitled"
 3 | output:
 4 |   pagedown::html_paged:
 5 |     toc: true
 6 |     self_contained: false
 7 | ---
 8 | 
 9 | # Chapter One
10 | 
11 | ```{r}
12 | summary(cars)
13 | ```
14 | 
15 | # Chapter Two
16 | 
17 | You can also embed plots, for example:
18 | 
19 | ```{r, echo=FALSE}
20 | plot(cars)
21 | ```
22 | 
23 | Note that the `echo = FALSE` parameter was added to the code chunk to prevent printing of the R code that generated the plot.
24 | 
25 | # Chapter Three
26 | 
27 | You can also print data frames
28 | 
29 | ```{r}
30 | mtcars
31 | ```
32 | 


--------------------------------------------------------------------------------
/man/find_chrome.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/chrome.R
 3 | \name{find_chrome}
 4 | \alias{find_chrome}
 5 | \title{Find Google Chrome, Microsoft Edge or Chromium in the system}
 6 | \usage{
 7 | find_chrome()
 8 | }
 9 | \value{
10 | A character string.
11 | }
12 | \description{
13 | On Windows, this function tries to find Chrome or Edge from the registry. On
14 | macOS, it returns a hard-coded path of Chrome under \file{/Applications}. On
15 | Linux, it searches for \command{chromium-browser} and \command{google-chrome}
16 | from the system's \var{PATH} variable.
17 | }
18 | 


--------------------------------------------------------------------------------
/tools/website.R:
--------------------------------------------------------------------------------
 1 | setwd('inst/examples')
 2 | for (tpl in list.files('../rmarkdown/templates', full.names = TRUE)) {
 3 |   f = list.files(tpl, '^skeleton[.]Rmd$', recursive = TRUE, full.names = TRUE)
 4 |   file.copy(f, paste0(basename(tpl), '.Rmd'))
 5 | }
 6 | 
 7 | options(htmltools.dir.version = FALSE)
 8 | 
 9 | for (f in list.files('.', '[.]Rmd$')) {
10 |   rmarkdown::render(f, output_options = list(self_contained = FALSE))
11 | }
12 | 
13 | writeLines(c(
14 |   'http://pagedown.netlify.com/* https://pagedown.rbind.io/:splat 301!',
15 |   'http://pagedown.rbind.io/*    https://pagedown.rbind.io/:splat 301!'
16 | ), '_redirects')
17 | 


--------------------------------------------------------------------------------
/inst/examples/zh-CN.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "网页排版中文范例"
 3 | author: "谢益辉"
 4 | date: '`r Sys.Date()`'
 5 | subtitle: 不用 Word 或 LaTeX 一样可以生成 PDF
 6 | output:
 7 |   pagedown::html_paged: 
 8 |     toc: true
 9 |     self_contained: false
10 | toc-title: 目录
11 | ---
12 | 
13 | # 简介 {#intro}
14 | 
15 | 谁说生成 PDF 一样要用 Word 或 LaTeX 呢？
16 | 
17 | 测试代码：
18 | 
19 | ```{r}
20 | 1 + 1:10
21 | ```
22 | 
23 | 测试引用：
24 | 
25 | > 姑苏开遍碧桃时，邂逅河阳女画师。  
26 | 红豆江南留梦影，白苹风末唱秋词。  
27 | 除非宿草难为友，那更名花愿作姬。  
28 | 只笑三郎年已老，华清池水恨流脂。
29 | 
30 | ## CSS 打印标准 {#css-standard}
31 | 
32 | ## CSS 样式框架 {#css-frameworks}
33 | 
34 | # Paged.js {#pagedjs}
35 | 
36 | # 应用范例 {#applications}
37 | 


--------------------------------------------------------------------------------
/man/business_card.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/card.R
 3 | \name{business_card}
 4 | \alias{business_card}
 5 | \title{Create business cards}
 6 | \usage{
 7 | business_card(template = pkg_resource("html", "card.html"))
 8 | }
 9 | \arguments{
10 | \item{template}{The path to the Pandoc template to convert Markdown to HTML.}
11 | }
12 | \value{
13 | An R Markdown output format.
14 | }
15 | \description{
16 | This output format is based on an example in the Github repo
17 | \url{https://github.com/RelaxedJS/ReLaXed-examples}. See
18 | \url{https://pagedown.rbind.io/business-card/} for an example.
19 | }
20 | \examples{
21 | pagedown::business_card()
22 | }
23 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-outline.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "A pagedown report with outlines"
 3 | author: "Yihui Xie and Romain Lesur"
 4 | date: "`r Sys.Date()`"
 5 | output:
 6 |   pagedown::html_paged:
 7 |     toc: true
 8 |     self_contained: false
 9 | ---
10 | 
11 | ```{r setup, include=FALSE}
12 | knitr::opts_chunk$set(echo = TRUE)
13 | ```
14 | 
15 | # Title 1
16 | 
17 | Some content of title 1
18 | 
19 | # Title 2
20 | 
21 | ## Title 2-1
22 | 
23 | Good
24 | 
25 | ## Title 2-2
26 | 
27 | Wow
28 | 
29 | ### Title 2-2-1
30 | 
31 | sub section
32 | 
33 | ### Title 2-2-2
34 | 
35 | some words
36 | 
37 | # 中文 {#chinese1}
38 | 
39 | pagedown 不错
40 | 
41 | # 中文 带空格 {#chinese2}
42 | 
43 | 很喜欢
44 | 
45 | ## 中文次级标题 {#chinese2-1}
46 | 
47 | nice
48 | 


--------------------------------------------------------------------------------
/inst/resources/css/default-fonts.css:
--------------------------------------------------------------------------------
 1 | @import 'https://fonts.googleapis.com/css?family=Old+Standard+TT';
 2 | 
 3 | body {
 4 |   font-family: 'Old Standard TT', Palatino, "Palatino Linotype", "Palatino LT STD", Georgia, 'source-han-serif-sc', 'Source Han Serif SC', 'Source Han Serif CN', 'Source Han Serif TC', 'Source Han Serif TW', 'Source Han Serif', 'Songti SC', 'Microsoft YaHei', serif;
 5 | }
 6 | blockquote {
 7 |   font-family: 'Old Standard TT', Palatino, "Palatino Linotype", "Palatino LT STD", Georgia, 'STKaiti', 'KaiTi', '楷体', 'SimKai', 'DFKai-SB', 'NSimSun', serif;
 8 | }
 9 | code {
10 |   font-family: Consolas, Courier, "Courier New", 'STKaiti', 'KaiTi', 'SimKai', monospace;
11 | }
12 | pre, code {
13 |   font-size: .95em;
14 | }
15 | 


--------------------------------------------------------------------------------
/man/html_letter.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/paged.R
 3 | \name{html_letter}
 4 | \alias{html_letter}
 5 | \title{Create a letter in HTML}
 6 | \usage{
 7 | html_letter(..., css = c("default", "letter"), fig_caption = FALSE)
 8 | }
 9 | \arguments{
10 | \item{..., css, fig_caption}{Arguments passed to \code{\link{html_paged}()}.}
11 | }
12 | \value{
13 | An R Markdown output format.
14 | }
15 | \description{
16 | This output format is similar to \code{html_paged}. The only differences are
17 | in the default stylesheets and the default value of the \code{fig_caption}
18 | parameter which is set to \code{FALSE}. See
19 | \url{https://pagedown.rbind.io/html-letter/} for an example.
20 | }
21 | 


--------------------------------------------------------------------------------
/R/card.R:
--------------------------------------------------------------------------------
 1 | #' Create business cards
 2 | #'
 3 | #' This output format is based on an example in the Github repo
 4 | #' \url{https://github.com/RelaxedJS/ReLaXed-examples}. See
 5 | #' \url{https://pagedown.rbind.io/business-card/} for an example.
 6 | #'
 7 | #' @return An R Markdown output format.
 8 | #' @export
 9 | #' @examples pagedown::business_card()
10 | #' @inheritParams html_paged
11 | business_card = function(template = pkg_resource('html', 'card.html')) {
12 |   rmarkdown::output_format(
13 |     list(opts_chunk = list(echo = FALSE)),
14 |     rmarkdown::pandoc_options('html', 'markdown', args = c(
15 |       '--template', rmarkdown::pandoc_path_arg(template),
16 |       '--variable', 'pagetitle=Business Card'
17 |     ))
18 |   )
19 | }
20 | 


--------------------------------------------------------------------------------
/man/thesis_paged.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/paged.R
 3 | \name{thesis_paged}
 4 | \alias{thesis_paged}
 5 | \title{Create a paged HTML thesis document suitable for printing}
 6 | \usage{
 7 | thesis_paged(
 8 |   ...,
 9 |   css = c("thesis"),
10 |   template = pkg_resource("html", "thesis.html")
11 | )
12 | }
13 | \arguments{
14 | \item{..., css, template}{Arguments passed to \code{\link{html_paged}()}.}
15 | }
16 | \value{
17 | An R Markdown output format.
18 | }
19 | \description{
20 | This output format is similar to \code{\link{html_paged}}. The only
21 | difference is in the default stylesheets and Pandoc template. See
22 | \url{https://pagedown.rbind.io/thesis-paged/} for an example.
23 | }
24 | 


--------------------------------------------------------------------------------
/man/jss_paged.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/paged.R
 3 | \name{jss_paged}
 4 | \alias{jss_paged}
 5 | \title{Create an article for the Journal of Statistical Software}
 6 | \usage{
 7 | jss_paged(
 8 |   ...,
 9 |   css = c("jss-fonts", "jss-page", "jss"),
10 |   template = pkg_resource("html", "jss_paged.html"),
11 |   csl = pkg_resource("csl", "journal-of-statistical-software.csl"),
12 |   highlight = NULL,
13 |   pandoc_args = NULL
14 | )
15 | }
16 | \arguments{
17 | \item{..., css, template, csl, highlight, pandoc_args}{Arguments passed to \code{\link{html_paged}()}.}
18 | }
19 | \value{
20 | An R Markdown output format.
21 | }
22 | \description{
23 | This output format is similar to \code{\link{html_paged}}.
24 | }
25 | 


--------------------------------------------------------------------------------
/man/html_resume.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/resume.R
 3 | \name{html_resume}
 4 | \alias{html_resume}
 5 | \title{Create a resume in HTML}
 6 | \usage{
 7 | html_resume(
 8 |   ...,
 9 |   css = "resume",
10 |   template = pkg_resource("html", "resume.html"),
11 |   number_sections = FALSE,
12 |   fig_caption = FALSE
13 | )
14 | }
15 | \arguments{
16 | \item{..., css, template, number_sections, fig_caption}{See
17 | \code{\link{html_paged}()}.}
18 | }
19 | \value{
20 | An R Markdown output format.
21 | }
22 | \description{
23 | This output format is based on Min-Zhong Lu's HTML/CSS in the Github repo
24 | \url{https://github.com/mnjul/html-resume}. See
25 | \url{https://pagedown.rbind.io/html-resume/} for an example.
26 | }
27 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-revealjs.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "Test reveal.js"
 3 | output: revealjs::revealjs_presentation
 4 | ---
 5 | 
 6 | ## R Markdown
 7 | 
 8 | This is an R Markdown presentation. Markdown is a simple formatting syntax for authoring HTML, PDF, and MS Word documents. For more details on using R Markdown see <http://rmarkdown.rstudio.com>.
 9 | 
10 | When you click the **Knit** button a document will be generated that includes both content as well as the output of any embedded R code chunks within the document.
11 | 
12 | ## Slide with Bullets
13 | 
14 | - Bullet 1
15 | - Bullet 2
16 | - Bullet 3
17 | 
18 | ## Slide with R Code and Output
19 | 
20 | ```{r}
21 | summary(cars)
22 | ```
23 | 
24 | ## Slide with Plot
25 | 
26 | ```{r, echo=FALSE}
27 | plot(cars)
28 | ```
29 | 
30 | 


--------------------------------------------------------------------------------
/inst/resources/css/letter.css:
--------------------------------------------------------------------------------
 1 | body {
 2 |   font-family: Palatino, "Palatino Linotype", "Palatino LT STD", Georgia, 'Source Han Serif', 'Songti SC', serif;
 3 |   line-height: 1.5em;
 4 | }
 5 | 
 6 | .title-page {
 7 |   display: none;
 8 | }
 9 | 
10 | .from, .date {
11 |   text-align: right;
12 | }
13 | .from p {
14 |   text-align: left;
15 |   display: inline-block;
16 | }
17 | 
18 | .logo {
19 |   position: running(header-logo);
20 |   height: 1cm;
21 | }
22 | 
23 | .date {
24 |   margin-top: 4em;
25 | }
26 | 
27 | @page {
28 |   size: letter;
29 |   margin: 4cm 3cm;
30 | 
31 |   @top-left {
32 |     content: element(header-logo);
33 |   }
34 |   @bottom-right {
35 |     content: counter(page);
36 |   }
37 | }
38 | 
39 | @media screen and (min-width: 12.32in) {
40 |   .pagedjs_page, .pagedjs_first_page {
41 |     margin: auto auto 5mm auto;
42 |   }
43 | }
44 | 


--------------------------------------------------------------------------------
/R/resume.R:
--------------------------------------------------------------------------------
 1 | #' Create a resume in HTML
 2 | #'
 3 | #' This output format is based on Min-Zhong Lu's HTML/CSS in the Github repo
 4 | #' \url{https://github.com/mnjul/html-resume}. See
 5 | #' \url{https://pagedown.rbind.io/html-resume/} for an example.
 6 | #' @param ...,css,template,number_sections,fig_caption See
 7 | #'   \code{\link{html_paged}()}.
 8 | #' @return An R Markdown output format.
 9 | #' @export
10 | html_resume = function(
11 |   ..., css = 'resume', template = pkg_resource('html', 'resume.html'),
12 |   number_sections = FALSE, fig_caption = FALSE
13 | ) {
14 |   html_format(
15 |     ..., css = css, template = template, theme = NULL, number_sections = number_sections,
16 |     fig_caption = fig_caption, .pagedjs = TRUE,
17 |     .dependencies = list(rmarkdown::html_dependency_font_awesome())
18 |   )
19 | }
20 | 
21 | # TODO: port this resume style https://github.com/ohrie/relaxed-resume
22 | 


--------------------------------------------------------------------------------
/inst/resources/css/jss-page.css:
--------------------------------------------------------------------------------
 1 | /* page size */
 2 | @page {
 3 |   size: 210mm 297mm;
 4 | }
 5 | 
 6 | /* first page */
 7 | @page :first {
 8 |   @top-center {
 9 |     content: none;
10 |   }
11 |   @top-right {
12 |     content: none;
13 |   }
14 | }
15 | 
16 | /* left page */
17 | .shorttitle {
18 |   position: running(runningTitle);
19 | }
20 | 
21 | @page :left {
22 |   @top-left {
23 |     content: counter(page);
24 |   }
25 |   @top-center {
26 |     content: element(runningTitle);
27 |     width: 150mm;
28 |     font-style: italic;
29 |   }
30 | }
31 | 
32 | .pagedjs_left_page .pagedjs_margin-top-center {
33 |   font-size: 16px;
34 | }
35 | 
36 | /* right page */
37 | @page :right {
38 |   @top-right {
39 |     content: counter(page);
40 |   }
41 |   @top-center {
42 |     content: "Journal of Statistical Software";
43 |     width: 150mm;
44 |     font-size: 16px;
45 |     font-style: italic;
46 |   }
47 | }
48 | 


--------------------------------------------------------------------------------
/inst/resources/js/paged-latest.js:
--------------------------------------------------------------------------------
 1 | {
 2 |   config = window.PagedConfig || {};
 3 |   window.PagedConfig = {auto: false};
 4 | 
 5 |   let pagedjs = document.createElement('script');
 6 |   pagedjs.src = 'https://unpkg.com/pagedjs/dist/paged.polyfill.js';
 7 |   let pagedjsLoaded = new Promise(_ => pagedjs.onload = _);
 8 | 
 9 |   let hooks = document.createElement('script');
10 |   hooks.src = document.head
11 |                       .querySelector('script[src*="config.js"]')
12 |                       .src
13 |                       .replace('config', 'hooks');
14 |   let hooksLoaded = new Promise(_ => hooks.onload = _);
15 | 
16 |   document.head.appendChild(pagedjs);
17 |   pagedjsLoaded.then(() => document.head.appendChild(hooks));
18 |   hooksLoaded.then(async () => {
19 |     if (config.before) await config.before();
20 |     await PagedPolyfill.preview();
21 |     if (config.after) config.after();
22 |   });
23 | }
24 | 


--------------------------------------------------------------------------------
/inst/resources/lua/footnotes.lua:
--------------------------------------------------------------------------------
 1 | --[[
 2 |     This filter transforms Pandoc's notes in spans.
 3 |     See https://stackoverflow.com/questions/51548827/pandoc-lua-filter-how-to-preserve-footnotes-formatting
 4 |     and https://github.com/jgm/pandoc/pull/4799
 5 | 
 6 |     Requires Pandoc >= 2.2.3
 7 | --]]
 8 | 
 9 | local options = {} -- where we store pandoc Meta
10 | local noteId = 0 -- ids for notes
11 | 
12 | local function getMeta(meta)
13 |   options = meta
14 |   return nil -- Do not modify Meta
15 | end
16 | 
17 | local function noteToSpan(note)
18 |   if not options["paged-footnotes"] then return nil end
19 |   noteId = noteId + 1
20 |   local inlines = pandoc.utils.blocks_to_inlines(note.content, {pandoc.Str'\010'}) -- insert \n between Pandoc's blocks
21 |   local attr = {}
22 |   attr["data-pagedown-footnote-number"] = noteId
23 |   attr["style"] = "white-space: pre-line;" -- use pre-line to render \n
24 |   return pandoc.Span(inlines, pandoc.Attr("fn" .. noteId, {"footnote"}, attr))
25 | end
26 | 
27 | return {{Meta = getMeta}, {Note = noteToSpan}}
28 | 


--------------------------------------------------------------------------------
/LICENSE.md:
--------------------------------------------------------------------------------
 1 | # MIT License
 2 | 
 3 | Copyright (c) 2023 pagedown authors
 4 | 
 5 | Permission is hereby granted, free of charge, to any person obtaining a copy
 6 | of this software and associated documentation files (the "Software"), to deal
 7 | in the Software without restriction, including without limitation the rights
 8 | to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 9 | copies of the Software, and to permit persons to whom the Software is
10 | furnished to do so, subject to the following conditions:
11 | 
12 | The above copyright notice and this permission notice shall be included in all
13 | copies or substantial portions of the Software.
14 | 
15 | THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
16 | IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
17 | FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
18 | AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
19 | LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
20 | OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
21 | SOFTWARE.
22 | 


--------------------------------------------------------------------------------
/man/poster_relaxed.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/poster.R
 3 | \name{poster_relaxed}
 4 | \alias{poster_relaxed}
 5 | \alias{poster_jacobs}
 6 | \title{Create posters in HTML}
 7 | \usage{
 8 | poster_relaxed(
 9 |   ...,
10 |   css = "poster-relaxed",
11 |   template = pkg_resource("html", "poster-relaxed.html"),
12 |   number_sections = FALSE
13 | )
14 | 
15 | poster_jacobs(
16 |   ...,
17 |   css = "poster-jacobs",
18 |   template = pkg_resource("html", "poster-jacobs.html")
19 | )
20 | }
21 | \arguments{
22 | \item{..., css, template, number_sections}{See \code{\link{html_paged}()}.}
23 | }
24 | \value{
25 | An R Markdown output format.
26 | }
27 | \description{
28 | The output format \code{poster_relaxed()} is based on an example in the
29 | Github repo \url{https://github.com/RelaxedJS/ReLaXed-examples}. See
30 | \url{https://pagedown.rbind.io/poster-relaxed/} for an example.
31 | 
32 | The output format \code{poster_jacobs()} mimics the style of the
33 |   \dQuote{Jacobs Landscape Poster LaTeX Template Version 1.0} at
34 |   \url{https://www.overleaf.com/gallery/tagged/poster}. See
35 |   \url{https://pagedown.rbind.io/poster-jacobs/} for an example.
36 | }
37 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-formats.R:
--------------------------------------------------------------------------------
 1 | library(testit)
 2 | test_format <- function(template, output_options = NULL, skip = NULL) {
 3 | 
 4 |   # don't run on CRAN due to complicated dependencies (Pandoc)
 5 |   if (!identical(Sys.getenv("NOT_CRAN"), "true")) return()
 6 |   # skip if requested
 7 |   if (!is.null(skip) && isTRUE(skip)) return()
 8 | 
 9 |   # work in a temp directory
10 |   dir <- tempfile()
11 |   dir.create(dir)
12 |   oldwd <- setwd(dir)
13 |   on.exit({
14 |     setwd(oldwd)
15 |     unlink(dir, recursive = TRUE)
16 |   }, add = TRUE)
17 | 
18 |   # create a draft of the format
19 |   testdoc <- paste0(template,".Rmd")
20 |   rmarkdown::draft(
21 |     testdoc, template,
22 |     package = "pagedown",
23 |     create_dir = FALSE, edit = FALSE
24 |   )
25 | 
26 |   message('Rendering the template for ', template, ' format...',
27 |           if(!is.null(output_options)) " (with output options)")
28 |   output_file <- rmarkdown::render(testdoc, output_options = output_options, quiet = TRUE)
29 |   assert(paste(template, "format works"), {
30 |     file.exists(output_file)
31 |   })
32 | }
33 | 
34 | templates <- dir(system.file("rmarkdown", "templates", package = "pagedown"))
35 | 
36 | for (template in templates) test_format(template)
37 | 
38 | 
39 | 
40 | 


--------------------------------------------------------------------------------
/R/poster.R:
--------------------------------------------------------------------------------
 1 | #' Create posters in HTML
 2 | #'
 3 | #' The output format \code{poster_relaxed()} is based on an example in the
 4 | #' Github repo \url{https://github.com/RelaxedJS/ReLaXed-examples}. See
 5 | #' \url{https://pagedown.rbind.io/poster-relaxed/} for an example.
 6 | #' @param ...,css,template,number_sections See \code{\link{html_paged}()}.
 7 | #' @return An R Markdown output format.
 8 | #' @export
 9 | poster_relaxed = function(
10 |   ..., css = 'poster-relaxed', template = pkg_resource('html', 'poster-relaxed.html'),
11 |   number_sections = FALSE
12 | ) {
13 |   html_format(
14 |     ..., css = css, template = template, theme = NULL, number_sections = number_sections
15 |   )
16 | }
17 | 
18 | 
19 | # TODO: most posters like https://www.overleaf.com/gallery/tagged/poster
20 | 
21 | #' @description The output format \code{poster_jacobs()} mimics the style of the
22 | #'   \dQuote{Jacobs Landscape Poster LaTeX Template Version 1.0} at
23 | #'   \url{https://www.overleaf.com/gallery/tagged/poster}. See
24 | #'   \url{https://pagedown.rbind.io/poster-jacobs/} for an example.
25 | #' @rdname poster_relaxed
26 | #' @export
27 | poster_jacobs = function(
28 |   ..., css = 'poster-jacobs', template = pkg_resource('html', 'poster-jacobs.html')
29 | ) {
30 |   poster_relaxed(..., css = css, template = template)
31 | }
32 | 


--------------------------------------------------------------------------------
/R/utils.R:
--------------------------------------------------------------------------------
 1 | pkg_resource = function(...) {
 2 |   system.file('resources', ..., package = 'pagedown', mustWork = TRUE)
 3 | }
 4 | 
 5 | lua_filters = function(...) {
 6 |   c(rbind("--lua-filter", pkg_resource('lua', c(...))))
 7 | }
 8 | 
 9 | list_css = function() {
10 |   css = list.files(pkg_resource('css'), '[.]css$', full.names = TRUE)
11 |   setNames(css, gsub('.css$', '', basename(css)))
12 | }
13 | 
14 | check_css = function(css) {
15 |   valid = names(list_css())
16 |   if (length(invalid <- setdiff(css, valid)) == 0) return()
17 |   invalid = invalid[1]
18 |   maybe = sort(agrep(invalid, valid, value = TRUE))[1]
19 |   hint = if (is.na(maybe)) '' else paste0('; did you mean "', maybe, '"?')
20 |   stop(
21 |     '"', invalid, '" is not a valid built-in CSS filename', if (hint != "") hint else ".",
22 |     " Use `pagedown:::list_css()` to view all built-in CSS filenames.", call. = FALSE
23 |   )
24 | }
25 | 
26 | merge_list = function(x, y) {
27 |   x[names(y)] = y
28 |   x
29 | }
30 | 
31 | to_json = function(x, ..., auto_unbox = TRUE, null = 'null') {
32 |   jsonlite::toJSON(x, ..., auto_unbox = auto_unbox, null = null)
33 | }
34 | 
35 | `%n%` = knitr:::`%n%`
36 | 
37 | run_servr = function() {
38 |   # see https://github.com/rstudio/httpuv/issues/250
39 |   later::with_loop(later::global_loop(), httpuv::service(NA))
40 | }
41 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/business-card/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | phone: "+1 844-448-1212"
 3 | email: "info@posit.co"
 4 | url: www.posit.co
 5 | address: |
 6 |   @rstudio
 7 | logo: "https://posit.co/wp-content/themes/Posit/dist/images/site-share-image.jpg"
 8 | person: 
 9 |   - name: Tareef Kawaf
10 |     title: President of Posit Software, PBC
11 |     repeat: 12
12 |   - name: Yihui Xie
13 |     title: Responsible for `r head(grep('(?<!shut)down$', unique(.packages(T)), value=T, perl=T), 2)`
14 |     email: xie@yihui.name
15 |     url: https://yihui.name
16 |     repeat: 12
17 | # googlefonts: "Righteous" # feel free to try other fonts at https://fonts.google.com
18 | paperwidth: 8.5in
19 | paperheight: 11in
20 | cols: 4
21 | rows: 3
22 | output: pagedown::business_card
23 | ---
24 | 
25 | <!-- if you prefer you can create cards in markdown instead of YAML declaration -->
26 | 
27 | ::: {.wrapper data-repeat="12"}
28 | [Another Name]{slot="name"}
29 | [Another Title]{slot="title"}
30 | [someone@posit.co]{slot="email"}
31 | :::
32 | 
33 | 
34 | <!-- if you prefer black text on white background, set eval=TRUE on the chunk below -->
35 | 
36 | ```{css, eval=FALSE}
37 | .wrapper {
38 |   color: black;
39 |   background-color: white;
40 |   border: 1px dotted black;
41 | }
42 | .coordinates {
43 |   color: #333;
44 | }
45 | ```
46 | 


--------------------------------------------------------------------------------
/.github/workflows/update-examples.yaml:
--------------------------------------------------------------------------------
 1 | # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
 2 | # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
 3 | on:
 4 |   workflow_dispatch:
 5 |   workflow_run:
 6 |       workflows: ["R-CMD-check"]
 7 |       types:
 8 |         - completed
 9 | 
10 | name: Build Examples
11 | 
12 | jobs:
13 |   R-CMD-check:
14 |     runs-on: ubuntu-latest
15 |     if: github.event_name == 'workflow_dispatch' || github.event.workflow_run.conclusion == 'success'
16 |     name: 'ubuntu-latest (R release) [Pandoc 2.14.2]'
17 | 
18 |     env:
19 |       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
20 | 
21 |     steps:
22 |       - uses: actions/checkout@v2
23 | 
24 |       - uses: r-lib/actions/setup-r@v2
25 |         with:
26 |           use-public-rspm: true
27 | 
28 |       - uses: r-lib/actions/setup-pandoc@v2
29 |         with:
30 |           pandoc-version: 2.19.2
31 | 
32 |       - uses: r-lib/actions/setup-r-dependencies@v2
33 |         with:
34 |           extra-packages: local::.
35 | 
36 |       - name: Build examples
37 |         run: Rscript tools/website.R
38 |         shell: bash
39 | 
40 |       - name: Clean source files for deployment
41 |         run: |
42 |           rm *.Rmd index.bib
43 |         working-directory: inst/examples
44 | 
45 |       - name: Deploy 🚀
46 |         uses: JamesIves/github-pages-deploy-action@v4
47 |         with:
48 |           folder: inst/examples # The folder the action should deploy.
49 | 


--------------------------------------------------------------------------------
/tests/test-cran/test-utils.R:
--------------------------------------------------------------------------------
 1 | library(testit)
 2 | 
 3 | assert('pkg_resource() finds files under the resources dir of the package', {
 4 |   (dir.exists(pkg_resource(c('css', 'js'))))
 5 | 
 6 |   res = lua_filters('loft.lua', 'footnotes.lua')
 7 |   (sum(res == '--lua-filter') == 2)
 8 |   (length(res) == 4)
 9 | })
10 | 
11 | assert('check_css() validates CSS file paths', {
12 |   (is.null(check_css(c('default', 'letter'))))
13 |   (has_error(check_css('default2'), silent = TRUE))
14 | })
15 | 
16 | assert('gen_toc_gs() works', {
17 |   (gen_toc_gs(list()) %==% NULL)
18 | 
19 |   toc = list(list(title = 'a', page = 3, children = list()))
20 |   res = '[/Count 0 /Title <a> /Page 3 /OUT pdfmark'
21 | 
22 |   (gen_toc_gs(toc) %==% res)
23 | 
24 |   toc = list(
25 |     list(title = 'a', page = 3, children = list(
26 |       list(title = 'a-1', page = 5, children = list()),
27 |       list(title = 'a-2', page = 8, children = list(
28 |         list(title = 'a-2-1', page = 9, children = list()),
29 |         list(title = 'a-2-2', page = 10, children = list())
30 |       ))
31 |     )),
32 |     list(title = 'b', page = 20, children = list())
33 |   )
34 |   res = c(
35 |     "[/Count 2 /Title <a> /Page 3 /OUT pdfmark",
36 |     "[/Count 0 /Title <a-1> /Page 5 /OUT pdfmark",
37 |     "[/Count 2 /Title <a-2> /Page 8 /OUT pdfmark",
38 |     "[/Count 0 /Title <a-2-1> /Page 9 /OUT pdfmark",
39 |     "[/Count 0 /Title <a-2-2> /Page 10 /OUT pdfmark",
40 |     "[/Count 0 /Title <b> /Page 20 /OUT pdfmark"
41 |   )
42 | 
43 |   (gen_toc_gs(toc) %==% res)
44 | })
45 | 
46 | 


--------------------------------------------------------------------------------
/.github/CONTRIBUTING.md:
--------------------------------------------------------------------------------
 1 | # Contributing to pagedown
 2 | 
 3 | We welcome contributions to the **pagedown** package. 
 4 | 
 5 | You can contribute in many ways: 
 6 | 
 7 | * By opening issues to give feedback and share ideas.
 8 | * By fixing typos in documentations
 9 | * By submitting Pull Request (PR) to fix some opened issues
10 | * By submitting Pull Request (PR) to suggest some new features. (It is considered good practice to open issues before to discuss ideas)
11 | 
12 | ## To submit a contribution using a Pull Request:
13 | 
14 | 1.  [Fork](https://github.com/rstudio/pagedown/fork) the repository and make your changes in a new branch specific to the PR. It is ok to edit a file in this repository using the `Edit` button on Github if the change is simple enough.
15 | 
16 | 2. For significant changes (e.g not required for fixing typos), ensure that you have signed the [individual](https://www.rstudio.com/wp-content/uploads/2014/06/rstudioindividualcontributoragreement.pdf) or [corporate](https://www.rstudio.com/wp-content/uploads/2014/06/rstudiocorporatecontributoragreement.pdf) contributor agreement as appropriate. You can send the signed copy to <contribute@rstudio.com>.
17 | 
18 | 3.  Submit the [pull request](https://help.github.com/articles/using-pull-requests). It is ok to submit as draft if you are still working on it but would like some feedback from us. It always good to share in the open that you are working on it.
19 | 
20 | We'll try to be as responsive as possible in reviewing and accepting pull requests. Appreciate your contributions very much!
21 | 


--------------------------------------------------------------------------------
/.github/workflows/check-pandoc-daily.yaml:
--------------------------------------------------------------------------------
 1 | # For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
 2 | # https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
 3 | on:
 4 |   workflow_dispatch:
 5 |   schedule:
 6 |     - cron: '37 9 * * *'
 7 | 
 8 | name: R-CMD-check-daily-pandoc
 9 | 
10 | jobs:
11 |   check:
12 |     runs-on: ${{ matrix.config.os }}
13 |     name: ${{ matrix.config.os }} (R release) [Pandoc devel]
14 | 
15 |     strategy:
16 |       fail-fast: false
17 |       matrix:
18 |         config:
19 |           - {os: windows-latest}
20 |           - {os: macOS-latest}
21 |           - {os: ubuntu-latest}
22 | 
23 |     env:
24 |       R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
25 |       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
26 |       R_KEEP_PKG_SOURCE: yes
27 | 
28 |     steps:
29 |       - uses: actions/checkout@v2
30 | 
31 |       - uses: r-lib/actions/setup-r@v2
32 |         with:
33 |           use-public-rspm: true
34 | 
35 |       - name: change temp dir
36 |         if: runner.os == 'Windows'
37 |         run: echo "TMPDIR=${{ runner.temp }}" >> $GITHUB_ENV
38 |         shell: bash
39 | 
40 |       - name: install pandoc devel
41 |         uses: cderv/actions/setup-pandoc-nightly@nightly-pandoc
42 | 
43 |       - uses: r-lib/actions/setup-r-dependencies@v2
44 |         with:
45 |           extra-packages: any::rcmdcheck
46 |           needs: check
47 | 
48 |       - name: Install extra dependencies
49 |         uses: ./.github/actions/install-ghostscript
50 | 
51 |       - uses: r-lib/actions/check-r-package@v2
52 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/jss-paged/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | author:
 3 |   - name: Yihui Xie
 4 |     affiliation: RStudio
 5 |     address: |
 6 |       First line  
 7 |       Second line
 8 |     email: <name@company.com>
 9 |     url: <https://posit.co>
10 |   - name: Romain Lesur
11 |     affiliation: Affiliation
12 | title: "A Capitalized Title: Something about a Package **foo**"
13 | shorttitle: "**foo**:  A Capitalized Title"
14 | abstract: |
15 |   The abstract of the article.
16 | # at least one keyword must be supplied
17 | keywords: [keywords, not capitalized, "[Java]{.proglang}"]
18 | links-to-footnotes: true
19 | paged-footnotes: true
20 | bibliography: index.bib
21 | output: 
22 |   pagedown::jss_paged:
23 |     self_contained: false
24 | # uncomment this line to produce HTML and PDF in RStudio:
25 | #knit: pagedown::chrome_print
26 | ---
27 | 
28 | # Introduction
29 | 
30 | This template demonstrates some of the basic [markdown]{.proglang} you'll need to know to create a JSS article with **pagedown** [@R-pagedown].
31 | 
32 | ## Code formatting
33 | 
34 | You should use **Pandoc**'s [markdown]{.proglang} but you also can use $\LaTeX$ commands:
35 | 
36 | * [Java]{.proglang} or $\proglang{Java}$ 
37 | * **plyr**, [plyr]{.pkg} or $\pkg{plyr}$
38 | * `print("abc")` or $\code{print("abc")}$
39 | 
40 | # [R]{.proglang} code
41 | 
42 | Can be inserted in regular [R Markdown]{.proglang} blocks.
43 | 
44 | ```{r}
45 | x <- 1:10
46 | x
47 | ```
48 | 
49 | # Render the document
50 | 
51 | If you use the option `self_contained: false` (see line \#22 of this `Rmd` file), don't click on the `Knit` button in RStudio. Use instead the **xaringan** [@R-xaringan] RStudio add-in _Infinite Moon Reader_.
52 | 
53 | # References {-}
54 | 
55 | ```{r, include=FALSE}
56 | knitr::write_bib(c(.packages(), 'pagedown', 'xaringan'), 'index.bib')
57 | ```
58 | 


--------------------------------------------------------------------------------
/man/pagedown-package.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/pagedown-package.R
 3 | \docType{package}
 4 | \name{pagedown-package}
 5 | \alias{pagedown}
 6 | \alias{pagedown-package}
 7 | \title{pagedown: Paginate the HTML Output of R Markdown with CSS for Print}
 8 | \description{
 9 | \if{html}{\figure{logo.png}{options: style='float: right' alt='logo' width='120'}}
10 | 
11 | Use the paged media properties in CSS and the JavaScript library 'paged.js' to split the content of an HTML document into discrete pages. Each page can have its page size, page numbers, margin boxes, and running headers, etc. Applications of this package include books, letters, reports, papers, business cards, resumes, and posters.
12 | }
13 | \seealso{
14 | Useful links:
15 | \itemize{
16 |   \item \url{https://github.com/rstudio/pagedown}
17 |   \item Report bugs at \url{https://github.com/rstudio/pagedown/issues}
18 | }
19 | 
20 | }
21 | \author{
22 | \strong{Maintainer}: Yihui Xie \email{xie@yihui.name} (\href{https://orcid.org/0000-0003-0645-5666}{ORCID})
23 | 
24 | Authors:
25 | \itemize{
26 |   \item Romain Lesur (\href{https://orcid.org/0000-0002-0721-5595}{ORCID}) [copyright holder]
27 |   \item Brent Thorne (\href{https://orcid.org/0000-0002-1099-3857}{ORCID})
28 |   \item Xianying Tan (\href{https://orcid.org/0000-0002-6072-3521}{ORCID})
29 | }
30 | 
31 | Other contributors:
32 | \itemize{
33 |   \item Christophe Dervieux (\href{https://orcid.org/0000-0003-4474-2498}{ORCID}) [contributor]
34 |   \item Atsushi Yasumoto (\href{https://orcid.org/0000-0002-8335-495X}{ORCID}) [contributor]
35 |   \item Posit Software, PBC [copyright holder, funder]
36 |   \item Adam Hyde (paged.js in resources/js/) [contributor]
37 |   \item Min-Zhong Lu (resume.css in resources/css/) [contributor]
38 |   \item Zulko (poster-relaxed.css in resources/css/) [contributor]
39 | }
40 | 
41 | }
42 | \keyword{internal}
43 | 


--------------------------------------------------------------------------------
/DESCRIPTION:
--------------------------------------------------------------------------------
 1 | Package: pagedown
 2 | Type: Package
 3 | Title: Paginate the HTML Output of R Markdown with CSS for Print
 4 | Version: 0.23.1
 5 | Authors@R: c(
 6 |   person("Yihui", "Xie", role = c("aut", "cre"), email = "xie@yihui.name", comment = c(ORCID = "0000-0003-0645-5666")),
 7 |   person("Romain", "Lesur", role = c("aut", "cph"), comment = c(ORCID = "0000-0002-0721-5595")),
 8 |   person("Christophe", "Dervieux", role = c("ctb"), comment = c(ORCID = "0000-0003-4474-2498")),
 9 |   person("Brent", "Thorne", role = "aut", comment = c(ORCID = "0000-0002-1099-3857")),
10 |   person("Xianying", "Tan", role = "aut", comment = c(ORCID = "0000-0002-6072-3521")),
11 |   person("Atsushi", "Yasumoto", role = c("ctb"), comment = c(ORCID = "0000-0002-8335-495X")),
12 |   person(given = "Posit Software, PBC", role = c("cph", "fnd")),
13 |   person("Adam", "Hyde", role = "ctb", comment = "paged.js in resources/js/"),
14 |   person("Min-Zhong", "Lu", role = "ctb", comment = "resume.css in resources/css/"),
15 |   person("Zulko", role = "ctb", comment = "poster-relaxed.css in resources/css/"),
16 |   person()
17 |   )
18 | Description: Use the paged media properties in CSS and the JavaScript
19 |   library 'paged.js' to split the content of an HTML document into discrete
20 |   pages. Each page can have its page size, page numbers, margin boxes, and
21 |   running headers, etc. Applications of this package include books, letters,
22 |   reports, papers, business cards, resumes, and posters.
23 | Depends: R (>= 3.5.0)
24 | Imports: rmarkdown (>= 2.13), bookdown (>= 0.8), htmltools, jsonlite, later (>= 1.0.0),
25 |   processx, servr (>= 0.31), httpuv, xfun, websocket
26 | Suggests: 
27 |     promises,
28 |     testit,
29 |     xaringan,
30 |     pdftools,
31 |     revealjs,
32 |     covr,
33 |     xml2
34 | License: MIT + file LICENSE
35 | URL: https://github.com/rstudio/pagedown
36 | BugReports: https://github.com/rstudio/pagedown/issues
37 | SystemRequirements: Pandoc (>= 2.2.3)
38 | Encoding: UTF-8
39 | RoxygenNote: 7.3.2
40 | 


--------------------------------------------------------------------------------
/inst/resources/js/chrome_print.js:
--------------------------------------------------------------------------------
 1 | {
 2 |   let RevealReady = new Promise((resolve) => {
 3 |     window.addEventListener(
 4 |       'DOMContentLoaded',
 5 |       () => {
 6 |         if (window.Reveal) {
 7 |           if (!window.location.search.match( /print-pdf/gi )) {
 8 |             window.location.search = 'print-pdf';
 9 |             return;
10 |           }
11 |           Reveal.addEventListener('ready', resolve);
12 |           if (Reveal.isReady()) resolve();
13 |         } else {
14 |           resolve();
15 |         }
16 |       },
17 |       {capture: true, once: true}
18 |     );
19 |   });
20 | 
21 |   let HTMLWidgetsReady = new Promise((resolve) => {
22 |     window.addEventListener(
23 |       'DOMContentLoaded',
24 |       () => {
25 |         if (window.HTMLWidgets) {
26 |           HTMLWidgets.addPostRenderHandler(resolve);
27 |         } else {
28 |           resolve();
29 |         }
30 |       },
31 |       {capture: true, once: true}
32 |     );
33 |   });
34 | 
35 |   let MathJaxReady = new Promise((resolve) => {
36 |     window.addEventListener(
37 |       'load',
38 |       () => {
39 |         if (window.MathJax) {
40 |           if (window.MathJax.Hub) {
41 |            window.MathJax.Hub.Register.StartupHook('Begin', () => {
42 |               window.MathJax.Hub.Queue(resolve);
43 |             });
44 |           } else {
45 |             let previousAuthorInit = window.MathJax.AuthorInit || function () {};
46 |             window.MathJax.AuthorInit = function() {
47 |               previousAuthorInit();
48 |               MathJax.Hub.Register.StartupHook('Begin', () => {
49 |                 MathJax.Hub.Queue(resolve);
50 |               });
51 |             };
52 |           }
53 |         }
54 |         else {
55 |           resolve();
56 |         }
57 |       },
58 |       {capture: true, once: true}
59 |     );
60 |   });
61 | 
62 |   window.pagedownReady = Promise.all([
63 |     RevealReady,
64 |     MathJaxReady,
65 |     HTMLWidgetsReady,
66 |     document.fonts.ready
67 |   ]);
68 | }
69 | 


--------------------------------------------------------------------------------
/inst/resources/lua/uri-to-fn.lua:
--------------------------------------------------------------------------------
 1 | local options = {} -- where we store pandoc Meta
 2 | 
 3 | -- This function tests the pandoc version againt a target version
 4 | -- The target version has to be of the form {2, 3} or {2, 3, 1}
 5 | local function pandocAvailable(target)
 6 |  -- use a shallow copy of PANDOC_VERSION
 7 |  -- this is required since pandoc 2.7.3, see https://github.com/rstudio/pagedown/issues/111
 8 |   local pandocVersion = {}
 9 |   for i = 1,3 do
10 |     table.insert(pandocVersion, PANDOC_VERSION[i])
11 |   end
12 |   pandocVersion[3] = pandocVersion[3] or 0 -- because there is not always a patch number
13 |   target[3] = target[3] or 0
14 | 
15 |   for i = 1,3 do
16 |     if pandocVersion[i] > target[i] then return true end
17 |     if pandocVersion[i] < target[i] then return false end
18 |   end
19 |   return true
20 | end
21 | 
22 | local function getMeta(meta)
23 |   options = meta
24 |   return nil -- Do not modify Meta
25 | end
26 | 
27 | local function uriToFootnote(link)
28 |   local target = link.target
29 |   local content = link.content
30 |   local contentString = pandoc.utils.stringify(content)
31 |   local footnoteContent
32 |   local classes = {}
33 |   local attr
34 | 
35 |   if not options["links-to-footnotes"] then return nil end
36 |   if target == contentString then return nil end
37 |   if target == "mailto:" .. contentString then return nil end
38 | 
39 |   if string.find(target, "://") then
40 |     if pandocAvailable({2, 3, 1}) then classes = {"uri"} end
41 |     attr = pandoc.Attr("", classes, {})
42 |     footnoteContent = {pandoc.Para({pandoc.Link(target, target, "", attr)})}
43 |     table.insert(content, pandoc.Note(footnoteContent))
44 |     return content
45 |   end
46 | 
47 |   if string.find(target, "^mailto:") then
48 |     if pandocAvailable({2, 3, 1}) then classes = {"email"} end
49 |     attr = pandoc.Attr("", classes, {})
50 |     footnoteContent = {pandoc.Para({
51 |       pandoc.Link(string.gsub(target, "^mailto:", ""), target, "", attr)
52 |     })}
53 |     table.insert(content, pandoc.Note(footnoteContent))
54 |     return content
55 |   end
56 | 
57 | end
58 | 
59 | return {{Meta = getMeta}, {Link = uriToFootnote}}
60 | 


--------------------------------------------------------------------------------
/inst/resources/css/jss-fonts.css:
--------------------------------------------------------------------------------
 1 | @font-face {
 2 |   font-family: 'MJSerif';
 3 |   font-style: normal;
 4 |   font-weight: 400;
 5 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_Main-Regular.woff) format('woff');
 6 | }
 7 | @font-face {
 8 |   font-family: 'MJSerif';
 9 |   font-style: normal;
10 |   font-weight: bold;
11 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_Main-Bold.woff) format('woff');
12 | }
13 | @font-face {
14 |   font-family: 'MJSerif';
15 |   font-style: italic;
16 |   font-weight: 400;
17 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_Main-Italic.woff) format('woff');
18 | }
19 | 
20 | @font-face {
21 |   font-family: 'MJSans';
22 |   font-style: normal;
23 |   font-weight: 400;
24 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_SansSerif-Regular.woff) format('woff');
25 | }
26 | @font-face {
27 |   font-family: 'MJSans';
28 |   font-style: normal;
29 |   font-weight: bold;
30 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_SansSerif-Bold.woff) format('woff');
31 | }
32 | @font-face {
33 |   font-family: 'MJSans';
34 |   font-style: italic;
35 |   font-weight: 400;
36 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_SansSerif-Italic.woff) format('woff');
37 | }
38 | 
39 | @font-face {
40 |   font-family: 'MJMono';
41 |   font-style: normal;
42 |   font-weight: 400;
43 |   src: url(https://mathjax.rstudio.com/latest/fonts/HTML-CSS/TeX/woff/MathJax_Typewriter-Regular.woff) format('woff');
44 | }
45 | 
46 | body {
47 |   font-family: 'MathJax_Main', MJSerif, 'source-han-serif-sc', 'Source Han Serif SC', 'Source Han Serif CN', 'Source Han Serif TC', 'Source Han Serif TW', 'Source Han Serif', 'Songti SC', 'Microsoft YaHei', Times, serif;
48 | }
49 | 
50 | blockquote {
51 |   font-family: 'MathJax_Main', MJSerif, 'STKaiti', 'KaiTi', '楷体', 'SimKai', 'DFKai-SB', 'NSimSun', Times, serif;
52 | }
53 | 
54 | code, .uri, .email, .doi {
55 |   font-family: 'MathJax_Typewriter', MJMono, "Courier New", 'STKaiti', 'KaiTi', 'SimKai', Courier, monospace;
56 | }
57 | 
58 | .pkg {
59 |   font-weight: bold;
60 | }
61 | 
62 | .proglang {
63 |   font-family: 'MathJax_SansSerif', MJSans, sans-serif;
64 | }
65 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/html-paged/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "A Multi-page HTML Document"
 3 | author: "Yihui Xie and Romain Lesur"
 4 | date: "`r Sys.Date()`"
 5 | output:
 6 |   pagedown::html_paged:
 7 |     toc: true
 8 |     # change to true for a self-contained document, but it'll be a litte slower for Pandoc to render
 9 |     self_contained: false
10 | lot: true # insert a list of tables
11 | lof: true # insert a list of figures
12 | # uncomment this line to produce HTML and PDF in RStudio:
13 | #knit: pagedown::chrome_print
14 | ---
15 | 
16 | ```{r setup, include=FALSE}
17 | knitr::opts_chunk$set(echo = TRUE)
18 | ```
19 | 
20 | # Introduction
21 | 
22 | This is an example of a multi-page HTML document with some options shown in YAML header. See https://pagedown.rbind.io for the full documentation. The rest of this document is random text.
23 | 
24 | # Random text
25 | 
26 | ```{r, results='asis', echo = FALSE}
27 | random_markdown = function(len = 100) {
28 |   uri = knitr::image_uri(file.path(R.home('doc'), 'html', 'logo.jpg'))
29 |   text = function(len) {
30 |     trimws(paste(sample(c(letters, rep(' ', 10)), len, TRUE), collapse = ''))
31 |   }
32 |   id = function() paste(sample(letters, 8, TRUE), collapse = '')
33 |   figure = function(i = id()) {
34 |     sprintf('![(#fig:%s)The R logo.](%s){width=%d%%}', i, uri, sample(20:60, 1))
35 |   }
36 |   tab = paste(knitr::kable(head(mtcars[, 1:5])), collapse = '\n')
37 |   table = function(i = id()) {
38 |     c(sprintf('Table: (#tab:%s)A table example.', i), tab)
39 |   }
40 |   unlist(lapply(seq_len(len), function(i) {
41 |     if (i %% 20 == 0) return(paste('#', text(sample(10:30, 1))))
42 |     if (i %% 10 == 0) return(paste('##', text(sample(10:30, 1))))
43 |     # insure some elements
44 |     if (i == 3) return(text(50))
45 |     if (i == 4) return(figure("md-fig"))
46 |     if (i == 5) return(text(50))
47 |     if (i == 6) return(table("md-tab"))
48 |     # then random
49 |     type = sample(1:3, 1, prob = c(.9, .03, .07))
50 |     switch(type, text(sample(50:300, 1)), figure(), table())
51 |   }))
52 | }
53 | cat(random_markdown(), sep = '\n\n')
54 | ```
55 | 
56 | # Knitr inserted Figures and tables
57 | 
58 | ## Simple graphics
59 | 
60 | ```{r simple-graphic, fig.cap = 'A very simple plot'}
61 | plot(1)
62 | ```
63 | 
64 | ## Simple tables
65 | 
66 | ```{r simple-table}
67 | knitr::kable(head(mtcars, 3), caption = "A Simple table")
68 | ```
69 | 


--------------------------------------------------------------------------------
/man/html_paged.Rd:
--------------------------------------------------------------------------------
 1 | % Generated by roxygen2: do not edit by hand
 2 | % Please edit documentation in R/paged.R
 3 | \name{html_paged}
 4 | \alias{html_paged}
 5 | \title{Create a paged HTML document suitable for printing}
 6 | \usage{
 7 | html_paged(
 8 |   ...,
 9 |   css = c("default-fonts", "default-page", "default"),
10 |   theme = NULL,
11 |   template = pkg_resource("html", "paged.html"),
12 |   csl = NULL,
13 |   front_cover = NULL,
14 |   back_cover = NULL
15 | )
16 | }
17 | \arguments{
18 | \item{...}{Arguments passed to
19 | \code{bookdown::\link[bookdown]{html_document2}}.}
20 | 
21 | \item{css}{A character vector of CSS and Sass file paths. If a path
22 | does not contain the \file{.css}, \file{.sass}, or \file{.scss} extension,
23 | it is assumed to be a built-in CSS file. For example, \code{default-fonts}
24 | means the file\code{pagedown:::pkg_resource('css', 'default-fonts.css')}.
25 | To see all built-in CSS files, run \code{pagedown:::list_css()}.}
26 | 
27 | \item{theme}{The Bootstrap theme. By default, Bootstrap is not used.}
28 | 
29 | \item{template}{The path to the Pandoc template to convert Markdown to HTML.}
30 | 
31 | \item{csl}{The path of the Citation Style Language (CSL) file used to format
32 | citations and references (see the \href{https://pandoc.org/MANUAL.html#citations}{Pandoc documentation}).}
33 | 
34 | \item{front_cover, back_cover}{Paths or urls to image files to be used
35 | as front or back covers. Theses images are available through CSS variables
36 | (see Details).}
37 | }
38 | \value{
39 | An R Markdown output format.
40 | }
41 | \description{
42 | This is an output format based on \code{bookdown::html_document2} (which
43 | means you can use those Markdown features added by \pkg{bookdown}). The HTML
44 | output document is split into multiple pages via a JavaScript library
45 | \pkg{paged.js}. These pages contain elements commonly seen in PDF documents,
46 | such as page numbers and running headers.
47 | }
48 | \details{
49 | When a path or an url is passed to the \code{front_cover} or \code{back_cover}
50 | argument, several CSS variables are created. They are named \code{--front-cover}
51 | and \code{--back-cover} and can be used as value for the CSS property \code{background-image}.
52 | For example, \code{background-image: var(--front-cover);}. When a vector of
53 | paths or urls is used as a value for \code{front_cover} or \code{back_cover},
54 | the CSS variables are suffixed with an index: \code{--front-cover-1},
55 | \code{--front-cover-2}, etc.
56 | }
57 | \references{
58 | \url{https://pagedown.rbind.io}
59 | }
60 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-features.R:
--------------------------------------------------------------------------------
 1 | library(testit)
 2 | 
 3 | assert('Page breaks work', {
 4 |   f = print_pdf('test-page-breaks.Rmd')
 5 |   (identical(pdftools::pdf_info(f)$pages, 5L))
 6 | })
 7 | 
 8 | assert('lot / lof are inserted correctly', {
 9 |   # This test is tied to skeleton.Rmd for html-paged template
10 |   # Check when skeleton.Rmd is modified
11 |   if (xfun::loadable("xml2")) {
12 |     dir.create(tmp_dir <- tempfile())
13 |     xfun::in_dir(tmp_dir, {
14 |       # use included template
15 |       rmarkdown::draft("test.Rmd", "html-paged", "pagedown", edit = FALSE)
16 |       res = rmarkdown::render("test.Rmd", quiet = TRUE)
17 |     })
18 |     content <- xml2::read_html(res, encoding = "UTF-8")
19 |     # correctly in TOC
20 |     toc <- xml2::xml_find_all(content, "//div[@id='TOC']")
21 |     toc_lot <- xml2::xml_find_all(toc, "ul/li/a[@href='#LOT']")
22 |     (length(toc_lot) == 1)
23 |     (xml2::xml_text(toc_lot) == "List of Tables")
24 |     toc_lof <- xml2::xml_find_all(toc, "ul/li/a[@href='#LOF']")
25 |     (length(toc_lof) == 1)
26 |     (xml2::xml_text(toc_lof) == "List of Figures")
27 |     # Correctly in top body
28 |     main <- xml2::xml_find_all(content, "//div[contains(@class, 'main')]")
29 |     divs <- xml2::xml_find_all(main, "div[@id]")
30 |     (xml2::xml_attr(divs[1], 'id') == "LOT")
31 |     (length(xml2::xml_find_all(divs[1], 'ul/li/a[contains(@href, "md-tab")]')) == 1L)
32 |     (length(xml2::xml_find_all(divs[1], 'ul/li/a[contains(@href, "simple-tab")]')) == 1L)
33 |     (xml2::xml_attr(divs[2], 'id') == "LOF")
34 |     (length(xml2::xml_find_all(divs[2], 'ul/li/a[contains(@href, "md-fig")]')) == 1L)
35 |     (length(xml2::xml_find_all(divs[2], 'ul/li/a[contains(@href, "simple-graphic")]')) == 1L)
36 | 
37 |     # Change titles
38 |     xfun::in_dir(tmp_dir, {
39 |       xfun::gsub_file("test.Rmd", pattern = "^---$",
40 |                       replacement = "---\nlot-title: Custom LOT\nlof-title: Custom LOF")
41 |       res = rmarkdown::render("test.Rmd", quiet = TRUE)
42 |     })
43 |     content <- xml2::read_html(res)
44 |     # correctly in TOC
45 |     toc <- xml2::xml_find_all(content, "//div[@id='TOC']")
46 |     toc_lot <- xml2::xml_find_all(toc, "ul/li/a[@href='#LOT']")
47 |     (length(toc_lot) == 1)
48 |     (xml2::xml_text(toc_lot) == "Custom LOT")
49 |     toc_lof <- xml2::xml_find_all(toc, "ul/li/a[@href='#LOF']")
50 |     (length(toc_lof) == 1)
51 |     (xml2::xml_text(toc_lof) == "Custom LOF")
52 |     # Correctly in top body
53 |     main <- xml2::xml_find_all(content, "//div[contains(@class, 'main')]")
54 |     h1 <- xml2::xml_find_all(main, "div/h1")
55 |     (xml2::xml_text(h1[1]) == "Custom LOT")
56 |     (xml2::xml_text(h1[2]) == "Custom LOF")
57 | 
58 |     # cleaning
59 |     unlink(tmp_dir, recursive = TRUE)
60 |   }
61 | })
62 | 


--------------------------------------------------------------------------------
/inst/resources/css/poster-jacobs.css:
--------------------------------------------------------------------------------
  1 | @page {
  2 |   size: 46.8in 33.1in;
  3 |   margin: 0;
  4 | }
  5 | * {
  6 |   box-sizing: border-box;
  7 | }
  8 | html {
  9 |   width: 46.8in;
 10 |   height: 33.09in;
 11 | }
 12 | body {
 13 |   margin: 0;
 14 |   font-size: 32px;
 15 |   width: 100%;
 16 |   height: 99.9%;
 17 |   grid-gap: 1.2in;
 18 |   padding: 1.2in;
 19 |   font-family: Optima, Calibri, sans-serif;
 20 | }
 21 | 
 22 | body {
 23 |   display: grid;
 24 |   grid-template-areas:
 25 |     'S1 S1 S1 S1'
 26 |     'S2 S4 S5 S9'
 27 |     'S2 S4 S5 S9'
 28 |     'S2 S4 S5 S9'
 29 |     'S2 S6 S6 S10'
 30 |     'S3 S7 S8 S11'
 31 |     'S3 S7 S8 S11'
 32 |     'S3 S7 S8 S11'
 33 |     'S3 S7 S8 S12'
 34 |     'S3 S7 S8 S12';
 35 |   grid-template-columns: repeat(4, 1fr);
 36 |   grid-template-rows: repeat(10, 1fr);
 37 | }
 38 | 
 39 | .section-1 { grid-area: S1; }
 40 | .section-2 { grid-area: S2; }
 41 | .section-3 { grid-area: S3; }
 42 | .section-4 { grid-area: S4; }
 43 | .section-5 { grid-area: S5; }
 44 | .section-6 { grid-area: S6; }
 45 | .section-7 { grid-area: S7; }
 46 | .section-8 { grid-area: S8; }
 47 | .section-9 { grid-area: S9; }
 48 | .section-10 { grid-area: S10; }
 49 | .section-11 { grid-area: S11; }
 50 | .section-12 { grid-area: S12; }
 51 | 
 52 | h1, .poster-title, .figure {
 53 |   text-align: center;
 54 | }
 55 | 
 56 | .poster-title h1 {
 57 |   font-family: "Gill Sans", Verdana, sans-serif;
 58 |   font-size: 3em;
 59 |   color: darkblue;
 60 | }
 61 | 
 62 | .poster-title {
 63 |   border-bottom: .08in solid darkblue;
 64 | }
 65 | 
 66 | h1 {
 67 |   color: limegreen;
 68 |   margin: 0;
 69 |   padding: .5em;
 70 |   font-size: 1.5em;
 71 | }
 72 | 
 73 | .block {
 74 |   border: .1in solid steelblue;
 75 |   background-color: aliceblue;
 76 | }
 77 | 
 78 | .block h1 {
 79 |   background-color: steelblue;
 80 |   color: white;
 81 | }
 82 | 
 83 | .block > .content {
 84 |   padding: 1em;
 85 |   line-height: 1.5em;
 86 | }
 87 | 
 88 | table {
 89 |   margin: auto;
 90 |   border-top: 3px solid #666;
 91 |   border-bottom: 3px solid #666;
 92 | }
 93 | table thead th { border-bottom: 3px solid #ddd; }
 94 | td { padding: 8px; }
 95 | th { padding: 15px; }
 96 | caption { margin-bottom: 10px; }
 97 | 
 98 | a { text-decoration: none; }
 99 | 
100 | h1 hr {
101 |   border: 6px solid gray;
102 |   clip-path: ellipse(50% 3px at center);
103 |   margin: 0;
104 | }
105 | 
106 | .figure-example {
107 |   text-align: center;
108 | }
109 | 
110 | .figure-example p:first-child {
111 |   background-color: floralwhite;
112 |   border: 5px dotted gray;
113 |   width: 90%;
114 |   height: 12em;
115 |   padding: 1em 0;
116 |   margin: 0 auto;
117 | }
118 | 
119 | .logo-example {
120 |   display: flex;
121 |   flex-wrap: wrap;
122 |   justify-content: space-between;
123 | }
124 | .logo-example > p {
125 |   width: 30%;
126 |   border: 5px dotted sandybrown;
127 |   background-color: whitesmoke;
128 |   height: 5em;
129 |   text-align: center;
130 | }
131 | 


--------------------------------------------------------------------------------
/inst/resources/html/poster-jacobs.html:
--------------------------------------------------------------------------------
 1 | <!DOCTYPE html>
 2 | <html xmlns="http://www.w3.org/1999/xhtml"$if(lang)$ lang="$lang$" xml:lang="$lang$"$endif$>
 3 |   <head>
 4 |     <meta charset="utf-8" />
 5 |     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
 6 |     <meta name="generator" content="pandoc" />
 7 |     <meta name="viewport" content="width=device-width, initial-scale=1">
 8 | 
 9 |     $for(author-meta)$<meta name="author" content="$author-meta$" />$endfor$
10 |     $if(date-meta)$<meta name="date" content="$date-meta$" />$endif$
11 |     <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
12 | 
13 |     $for(header-includes)$
14 |     $header-includes$
15 |     $endfor$
16 | 
17 |     $if(highlightjs)$
18 |     <link rel="stylesheet" href="$highlightjs$/$if(highlightjs-theme)$$highlightjs-theme$$else$default$endif$.css" $if(html5)$$else$type="text/css" $endif$/>
19 |     <script src="$highlightjs$/highlight.js"></script>
20 |     <script type="text/javascript">hljs.configure({languages: []}); hljs.initHighlightingOnLoad();</script>
21 |     $endif$
22 | 
23 |     $if(highlighting-css)$<style type="text/css">$highlighting-css$</style>$endif$
24 | 
25 |     $for(css)$
26 |     <link rel="stylesheet" href="$css$" $if(html5)$$else$type="text/css" $endif$/>
27 |     $endfor$
28 | 
29 |   </head>
30 |   <body>
31 | 
32 | $for(include-before)$
33 | $include-before$
34 | $endfor$
35 | 
36 | <div class="poster-title">
37 |   <h1 class="title">$title$</h1>
38 |   <h2 class="author">$for(author)$$author$$sep$, $endfor$</h2>
39 |   <h2 class="institute">$institute$</h2>
40 | </div>
41 | 
42 | $body$
43 | 
44 | <script type="text/javascript">
45 | (function() {
46 |   // add appropriate classes to h1 and its parent div
47 |   var i, d, p, s, el, els = document.getElementsByTagName('h1');
48 |   for (i = 0; i < els.length; i++) {
49 |     el = els[i]; p = el.parentNode;
50 |     if (p.className === 'section level1') {
51 |       el.append(document.createElement('hr'));
52 |     }
53 |     p.className += ' section-' + (i + 1);
54 |     s = p.dataset['color'];
55 |     if (s) el.style.color = s;
56 |     s = p.dataset['backgroundColor'];
57 |     if (s) p.style.backgroundColor = s;
58 |     s = p.dataset['borderColor'];
59 |     if (s) {
60 |       el.style.backgroundColor = s;
61 |       p.style.borderColor = s;
62 |     }
63 |     d = document.createElement('div');
64 |     d.className = 'content';
65 |     while (el.nextSibling) {
66 |       d.append(el.nextSibling);
67 |     }
68 |     p.append(d);
69 |   }
70 | })();
71 | </script>
72 | 
73 | $if(math)$
74 | $if(mathjax)$
75 | <!-- dynamically load mathjax for compatibility with self-contained -->
76 | <script>
77 |   (function () {
78 |     var script = document.createElement("script");
79 |     script.type = "text/javascript";
80 |     var src = `$mathjaxurl$` + "?config=TeX-MML-AM_CHTML";
81 |     if (location.protocol !== "file:" && /^https?:/.test(src))
82 |       src = src.replace(/^https?:/, '');
83 |     script.src = src;
84 |     document.getElementsByTagName("head")[0].appendChild(script);
85 |   })();
86 | </script>
87 | $endif$
88 | $endif$
89 | 
90 | $for(include-after)$
91 | $include-after$
92 | $endfor$
93 | 
94 |   </body>
95 | </html>
96 | 


--------------------------------------------------------------------------------
/tests/test-ci/test-chrome.R:
--------------------------------------------------------------------------------
  1 | library(testit)
  2 | 
  3 | is_pdf = function(file) {
  4 |   identical(readBin(file, 'raw', 5L), charToRaw('%PDF-'))
  5 | }
  6 | 
  7 | run_promise = function(x) {
  8 |   # There's no easy way to test the promise object so it's based on Romain Lesur's code at
  9 |   # https://github.com/RLesur/crrri/blob/48b5c2c5e0d209d3742720d30ed91694a6e80c12/R/hold.R#L34-L66
 10 |   state <- new.env()
 11 |   state$pending = TRUE
 12 |   promises::then(
 13 |     x,
 14 |     onFulfilled = function(value) {
 15 |       state$pending = FALSE
 16 |       state$value = value
 17 |     },
 18 |     onRejected = function(error) {
 19 |       state$pending = FALSE
 20 |       state$reason = error
 21 |     }
 22 |   )
 23 |   while(state$pending) {
 24 |     later::run_now(all = FALSE)
 25 |   }
 26 |   if (!is.null(state$reason)) stop(state$reason)
 27 |   state$value
 28 | }
 29 | 
 30 | assert('find_chrome() finds Chrome executable', {
 31 |   (nzchar(find_chrome()))
 32 | })
 33 | 
 34 | assert('chrome_print() works with an url', {
 35 |   (is_pdf(print_pdf('https://www.r-project.org')))
 36 | })
 37 | 
 38 | assert('chrome_print() works with a local file path', {
 39 |   r_faq_html = file.path(R.home('doc'), 'manual', 'R-FAQ.html')
 40 | 
 41 |   (is_pdf(print_pdf(r_faq_html)))
 42 | })
 43 | 
 44 | assert('chrome_print() supports PDF streaming', {
 45 |   r_faq_html = file.path(R.home('doc'), 'manual', 'R-FAQ.html')
 46 | 
 47 |   (is_pdf(print_pdf(r_faq_html, options = list(transferMode = 'ReturnAsStream'))))
 48 | })
 49 | 
 50 | 
 51 | assert('chrome_print() works with html_paged format', {
 52 |   (is_pdf(print_pdf('test-chrome.Rmd')))
 53 | })
 54 | 
 55 | assert('chrome_print() works with reveal.js presentations', {
 56 |   f = print_pdf('test-revealjs.Rmd')
 57 | 
 58 |   (is_pdf(f))
 59 | 
 60 |   # in theory it should be 5 pages; I don't know why it's 6 instead
 61 |   (pdftools::pdf_info(f)$pages %==% 7L)
 62 | 
 63 |   (pdftools::pdf_text(f)[1] %==% 'Test reveal.js\n')
 64 | })
 65 | 
 66 | assert('find_gs() finds Ghostscript executable', {
 67 |   (nzchar(find_gs()))
 68 |   (gs_available())
 69 | })
 70 | 
 71 | assert('chrome_print() generates expected outline', {
 72 |   f = print_pdf('test-outline.Rmd')
 73 | 
 74 |   (is_pdf(f))
 75 | 
 76 |   toc = pdftools::pdf_toc(f)[[2L]]
 77 |   res = list(
 78 |     list(title = "1 Title 1", children = list()),
 79 |     list(
 80 |       title = "2 Title 2",
 81 |       children = list(
 82 |         list(title = "2.1 Title 2-1", children = list()),
 83 |         list(title = "2.2 Title 2-2", children = list(
 84 |           list(title = "2.2.1 Title 2-2-1", children = list()),
 85 |           list(title = "2.2.2 Title 2-2-2",children = list())
 86 |         ))
 87 |       )
 88 |     ),
 89 |     list(title = "3 \u4e2d\u6587", children = list()),
 90 |     list(title = "4 \u4e2d\u6587 \u5e26\u7a7a\u683c", children = list(
 91 |       list(title = "4.1 \u4e2d\u6587\u6b21\u7ea7\u6807\u9898", children = list())
 92 |     ))
 93 |   )
 94 | 
 95 |   (toc %==% res)
 96 | 
 97 |   # works for async
 98 |   f = run_promise(print_pdf('test-outline.Rmd', async = TRUE))
 99 |   (is_pdf(f))
100 |   toc = pdftools::pdf_toc(f)[[2L]]
101 |   (toc %==% res)
102 | 
103 |   # works for output name with non-ASCII & white space
104 |   output = tempfile(pattern = "\u4e2d \u6587")
105 |   f = print_pdf('test-outline.Rmd', output = output)
106 |   (is_pdf(f))
107 |   toc = pdftools::pdf_toc(f)[[2L]]
108 |   (toc %==% res)
109 | 
110 |   # works for input name with non-ASCII & white space
111 |   input = tempfile(pattern = "\u4e2d \u6587", fileext = '.Rmd')
112 |   file.copy('test-outline.Rmd', input)
113 |   f = print_pdf(input)
114 |   (is_pdf(f))
115 |   toc = pdftools::pdf_toc(f)[[2L]]
116 |   (toc %==% res)
117 | })
118 | 


--------------------------------------------------------------------------------
/.github/workflows/R-CMD-check.yaml:
--------------------------------------------------------------------------------
 1 | # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
 2 | # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
 3 | #
 4 | # NOTE: This workflow is overkill for most R packages and
 5 | # check-standard.yaml is likely a better choice.
 6 | # usethis::use_github_action("check-standard") will install it.
 7 | on:
 8 |   push:
 9 |     branches: [main, master]
10 |     paths-ignore:
11 |       - 'pkgdown/**'
12 |       - '.github/workflows/pkgdown.yaml'
13 |   pull_request:
14 |     branches: [main, master]
15 |     paths-ignore:
16 |       - 'pkgdown/**'
17 |       - '.github/workflows/pkgdown.yaml'
18 | 
19 | name: R-CMD-check
20 | 
21 | jobs:
22 |   R-CMD-check:
23 |     runs-on: ${{ matrix.config.os }}
24 | 
25 |     name: ${{ matrix.config.os }} (${{ matrix.config.r }})
26 | 
27 |     strategy:
28 |       fail-fast: false
29 |       matrix:
30 |         config:
31 |           # testing R release with last shipped pandoc version in RStudio IDE and new pandoc
32 |           - {os: windows-latest, pandoc: '3.1.1',    r: 'release'}
33 |           - {os: macOS-latest,   pandoc: '3.1.1',    r: 'release'}
34 |           - {os: ubuntu-latest,  pandoc: 'devel',    r: 'release'}
35 |           # testing older pandoc versions
36 |           - {os: ubuntu-latest,  pandoc: '2.19.2',   r: 'release'}
37 |           - {os: ubuntu-latest,  pandoc: '2.18',     r: 'release'}
38 |           - {os: ubuntu-latest,  pandoc: '2.17.1.1', r: 'release'}
39 |           - {os: ubuntu-latest,  pandoc: '2.16.2',   r: 'release'}
40 |           - {os: ubuntu-latest,  pandoc: '2.14.2',   r: 'release'}
41 |           - {os: ubuntu-latest,  pandoc: '2.11.4',   r: 'release'}
42 |           - {os: ubuntu-latest,  pandoc: '2.7.3',    r: 'release'}
43 |           - {os: ubuntu-latest,  pandoc: '2.5',      r: 'release'}
44 |           # testing other R versions
45 |           - {os: ubuntu-latest,  pandoc: '2.11.4',   r: 'devel', http-user-agent: 'release'}
46 |           - {os: ubuntu-latest,  pandoc: '2.11.4',   r: 'oldrel-1'}
47 |           - {os: ubuntu-latest,  pandoc: '2.11.4',   r: 'oldrel-2'}
48 |           - {os: ubuntu-latest,  pandoc: '2.11.4',   r: 'oldrel-3'}
49 | 
50 |     env:
51 |       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
52 |       R_KEEP_PKG_SOURCE: yes
53 | 
54 |     steps:
55 |       - uses: actions/checkout@v3
56 | 
57 |       - uses: r-lib/actions/setup-r@v2
58 |         with:
59 |           r-version: ${{ matrix.config.r }}
60 |           http-user-agent: ${{ matrix.config.http-user-agent }}
61 |           use-public-rspm: true
62 | 
63 |       - uses: r-lib/actions/setup-r-dependencies@v2
64 |         with:
65 |           extra-packages: any::rcmdcheck
66 |           needs: check
67 | 
68 |       - name: Remove default installed Pandoc
69 |         if: runner.os == 'Linux'
70 |         run: sudo dpkg -r pandoc
71 | 
72 |       - uses: r-lib/actions/setup-pandoc@v2
73 |         if: matrix.config.pandoc != 'devel'
74 |         with:
75 |           pandoc-version: ${{ matrix.config.pandoc }}
76 | 
77 |       - uses: cderv/actions/setup-pandoc-nightly@nightly-pandoc
78 |         if: matrix.config.pandoc == 'devel'
79 | 
80 |       - name: Pandoc info
81 |         run: |
82 |           rmarkdown::find_pandoc()
83 |         shell: Rscript {0}
84 | 
85 |       - name: Install extra dependencies
86 |         uses: ./.github/actions/install-ghostscript
87 | 
88 |       - uses: r-lib/actions/check-r-package@v2
89 |         with:
90 |           upload-snapshots: true
91 | 
92 |       - name: Test coverage
93 |         if: success() && runner.os == 'Linux' && matrix.config.r == 'release' && matrix.config.pandoc == '2.19.2'
94 |         run: |
95 |           pak::pkg_install('covr')
96 |           covr::codecov()
97 |         shell: Rscript {0}
98 | 


--------------------------------------------------------------------------------
/inst/resources/css/default-page.css:
--------------------------------------------------------------------------------
  1 | /* page size */
  2 | @page {
  3 |   size: 6in 9in; /* var(--pagedjs-width) doesn't work in browser when printing */
  4 | }
  5 | @page :blank {
  6 | 
  7 | }
  8 | 
  9 | /* store some string variables */
 10 | .shorttitle1 {
 11 |   string-set: h1-text content(text);
 12 | }
 13 | 
 14 | .shorttitle2 {
 15 |   string-set: h2-text content(text);
 16 | }
 17 | 
 18 | /* left page */
 19 | .running-h1-title {
 20 |   position: running(runningH1Title);
 21 |   width: var(--running-title-width);
 22 |   text-overflow: ellipsis;
 23 |   overflow: hidden;
 24 | }
 25 | .running-h1-title:before {
 26 |   content: string(h1-text);
 27 | }
 28 | 
 29 | @page chapter:left {
 30 |   @top-left {
 31 |     content: counter(page);
 32 |   }
 33 |   @top-right {
 34 |     content: element(runningH1Title);
 35 |     white-space: nowrap !important;
 36 |   }
 37 | }
 38 | 
 39 | /* right page */
 40 | .running-h2-title {
 41 |   position: running(runningH2Title);
 42 |   width: var(--running-title-width);
 43 |   text-overflow: ellipsis;
 44 |   overflow: hidden;
 45 | }
 46 | .running-h2-title:before {
 47 |   /* We would want to write: */
 48 |   /* content: string(h2-text, start); */
 49 |   /* However, this is yet unsupported by Paged.js, see https://gitlab.coko.foundation/pagedjs/pagedjs/-/issues/38 */
 50 |   content: string(h2-text);
 51 | }
 52 | @page chapter:right {
 53 |   @top-right {
 54 |     content: counter(page);
 55 |   }
 56 |   @top-left {
 57 |     content: element(runningH2Title);
 58 |     white-space: nowrap !important;
 59 |   }
 60 | }
 61 | 
 62 | /* New chapter page */
 63 | @page chapter:first {
 64 |   @top-left {
 65 |     content: none;
 66 |   }
 67 |   @top-right {
 68 |     content: none;
 69 |   }
 70 |   @bottom-right {
 71 |     content: counter(page);
 72 |   }
 73 | }
 74 | @page :first {
 75 |   @top-left {
 76 |     content: none;
 77 |   }
 78 |   @top-right {
 79 |     content: none;
 80 |   }
 81 |   @bottom-right {
 82 |     content: none !important;
 83 |   }
 84 |   background-image: var(--front-cover);
 85 |   background-position: center;
 86 |   background-size: contain;
 87 |   background-repeat: no-repeat;
 88 | }
 89 | 
 90 | /* Front cover */
 91 | .front-cover {
 92 |   break-after: recto;
 93 | }
 94 | 
 95 | /* Front page or title page */
 96 | .front-page {
 97 |   counter-reset: page 1;
 98 | }
 99 | 
100 | /* Front matter*/
101 | @page frontmatter:left {
102 |   @top-left {
103 |     content: counter(page, lower-roman);
104 |   }
105 |   @top-right {
106 |     content: element(runningH1Title);
107 |     white-space: nowrap !important;
108 |   }
109 | }
110 | @page frontmatter:right {
111 |   @top-right {
112 |     content: counter(page, lower-roman);
113 |   }
114 |   @top-left {
115 |     content: element(runningH1Title);
116 |     white-space: nowrap !important;
117 |   }
118 | }
119 | @page frontmatter:first {
120 |   @top-left {
121 |     content: none;
122 |   }
123 |   @top-right {
124 |     content: none;
125 |   }
126 |   @bottom-right {
127 |     content: counter(page, lower-roman);
128 |   }
129 | }
130 | 
131 | /* last page or back cover */
132 | .back-cover {
133 |   break-before: verso;
134 | }
135 | .pagedjs_page:nth-last-of-type(1) {
136 |   background-image: var(--back-cover);
137 |   background-position: center;
138 |   background-size: contain;
139 |   background-repeat: no-repeat;
140 | }
141 | 
142 | /* page breaks; aka CSS fragmentation */
143 | .level1 {
144 |   break-before: recto;
145 |   page: chapter;
146 | }
147 | .front-matter-container .level1 {
148 |   page: frontmatter;
149 | }
150 | .section > h1, .section > h2, .section > h3, .section > h4, .section > h5, .section > h6 {
151 |   break-after: avoid;
152 | }
153 | .footenotes {
154 |   break-before: always;
155 |   break-after: always;
156 | }
157 | .figure {
158 |   break-inside: avoid;
159 | }
160 | 
161 | /* reset page numbering for main content */
162 | .main .level1:first-child h1 {
163 |   counter-reset: page 1;
164 | }
165 | 
166 | /* do not break captions */
167 | caption {
168 |   break-inside: avoid;
169 |   break-after: avoid;
170 | }
171 | 


--------------------------------------------------------------------------------
/inst/resources/css/poster-relaxed.css:
--------------------------------------------------------------------------------
  1 | @import 'https://fonts.googleapis.com/css?family=Paytone+One|PT+Sans';
  2 | @import 'https://cdnjs.cloudflare.com/ajax/libs/semantic-ui/2.3.1/semantic.min.css';
  3 | 
  4 | @page {
  5 |   size: 46.8in 33.1in;
  6 |   margin: 0;
  7 | }
  8 | html, body {
  9 |   background: #cce7f1;
 10 | }
 11 | html {
 12 |   font-family: "PT Sans";
 13 |   width: 46.8in;
 14 |   height: 33.09669in;
 15 | }
 16 | body {
 17 |   margin: 0;
 18 |   width: 100% !important;
 19 |   height: 100% !important;
 20 |   display: grid;
 21 |   grid-gap: 1.2in;
 22 |   grid-template-columns: 60px 60px;
 23 |   padding: 1.2in !important;
 24 | }
 25 | div .title.ribbon {
 26 |   font-size: 0.6in;
 27 |   border-radius: 0 0.2in 0.2in 0 !important;
 28 | }
 29 | .content {
 30 |   max-width: 100%;
 31 | }
 32 | p {
 33 |   margin-top: 0.5em;
 34 | }
 35 | body, p, .math, li {
 36 |   font-size: 32px;
 37 | }
 38 | h2 {
 39 |   font-size: 48px;
 40 | }
 41 | .figure {
 42 |   break-inside: avoid;
 43 |   box-shadow: 0 1px 3px 0 #d4d4d5, 0 0 0 1px #d4d4d5;
 44 |   color: #666;
 45 |   padding: 1em;
 46 | }
 47 | img {
 48 |   max-width: 100%;
 49 | }
 50 | .figure img {
 51 |   display: block;
 52 |   margin: auto;
 53 | }
 54 | .figure .caption {
 55 |   font-size: 24px;
 56 | }
 57 | .card {
 58 |   line-height: 1.3em;
 59 | }
 60 | pre {
 61 |   box-shadow: 0 4px 8px 0 rgba(0, 0, 0, 0.2), 0 6px 20px 0 rgba(0, 0, 0, 0.19);
 62 |   width: 100%;
 63 |   padding: 0.8em;
 64 |   font-size: 36px;
 65 | }
 66 | body {
 67 |   grid-template-areas:
 68 |    "P P H H H M M"
 69 |    "P P H H H M M"
 70 |    "P P U U U M M"
 71 |    "R R R R R M M"
 72 |    "R R R R R S S";
 73 |   grid-template-columns: repeat(7, 1fr);
 74 |   grid-template-rows: repeat(5, 1fr);
 75 | }
 76 | .section-1 {
 77 |   grid-area: H;
 78 | }
 79 | .section-2 {
 80 |   grid-area: U;
 81 | }
 82 | .section-3 {
 83 |   grid-area: P;
 84 | }
 85 | .section-4 {
 86 |   grid-area: M;
 87 | }
 88 | .section-5 {
 89 |   grid-area: R;
 90 | }
 91 | .section-6 {
 92 |   grid-area: S;
 93 | }
 94 | 
 95 | .section-1 h1 {
 96 |   margin: 0;
 97 |   font-size: 1.5in;
 98 |   font-family: "Paytone One";
 99 |   text-align: center;
100 |   text-transform: uppercase;
101 |   color: #2c2c2c;
102 |   letter-spacing: .05em;
103 |   text-shadow: 0.04em 0.04em 0px #cdeaf4, 0.07em 0.07em 0px rgba(0, 0, 0, 0.2);
104 | }
105 | .section-1 h1 .tiny {
106 |   display: block;
107 |   text-shadow: none;
108 |   font-size: 0.5em;
109 |   text-transform: none;
110 |   margin-top: -0.7em;
111 |   margin-bottom: -0.7em;
112 | }
113 | .section-1 p {
114 |   font-family: "Paytone One";
115 |   width: 100%;
116 |   height: auto;
117 |   outline: 0.1in dashed #98abb9;
118 |   outline-offset: -0.3in;
119 |   background-color: #556068;
120 |   margin-top: 1in;
121 |   -webkit-box-shadow: 0.1in 0.1in 0.1in #000;
122 |   color: #ffffffdd;
123 |   text-align: justify;
124 |   padding: 2.3em;
125 | }
126 | .section-1 a {
127 |   color: #fbbd08;
128 | }
129 | 
130 | .section-2 p {
131 |   float: left;
132 |   margin: 0.5in 0.5cm auto 1cm;
133 |   width: 22%;
134 | }
135 | .section-2 .card {
136 |   display: inline-block;
137 |   height: 11cm;
138 |   vertical-align: top;
139 |   margin-right: 0.8cm;
140 |   margin-top: -3cm !important;
141 | }
142 | .section-2 .disclaimer {
143 |   position: absolute;
144 |   bottom: -0.6em;
145 |   right: 0.6em;
146 |   color: #aaa;
147 | }
148 | .section-2 .member-cards {
149 |   float: right;
150 | }
151 | 
152 | .section-3 .content, .section-4 .content, .section-5 .content {
153 |   padding: 1cm;
154 |   text-align: justify;
155 | }
156 | 
157 | .section-5 .content {
158 |   margin-top: -2cm;
159 |   column-count: 4;
160 |   column-gap: 2cm;
161 |   column-fill: auto;
162 |   padding-bottom: 0.3cm;
163 |   padding-top: 0.3cm;
164 | }
165 | .section-5 .content > p:first-of-type {
166 |   margin-top: 3cm;
167 | }
168 | 
169 | .section-6 .content {
170 |   margin-top: -2cm;
171 |   column-count: 2;
172 |   column-gap: 2cm;
173 |   column-fill: auto;
174 |   padding: 1cm;
175 |   padding-bottom: 0.3cm;
176 |   padding-top: 0.3cm;
177 | }
178 | .section-6 .content p {
179 |   font-size: 26px;
180 |   margin-bottom: 0.2cm;
181 | }
182 | .section-6 .content .references div:first-child {
183 |   margin-top: 3cm;
184 | }
185 | 
186 | @media screen {
187 |   body {
188 |     overflow-x: auto;
189 |   }
190 | }
191 | 


--------------------------------------------------------------------------------
/inst/resources/lua/jss.lua:
--------------------------------------------------------------------------------
  1 | --[[
  2 |     A Pandoc filter for the Journal of Statistical Software template
  3 |     This filter performs the following actions:
  4 |     - store plain keywords in a pandoc variable named keywords-plain
  5 |     - calculate the rank for each author
  6 |     - build the DOI from the volume and issue parameters and store it in a variable named doi
  7 |     - use fallback values for missing month, year, volume or issue
  8 | 
  9 |     Developped using Pandoc 2.2.3 by @RLesur
 10 | --]]
 11 | 
 12 | -- REQUIREMENTS: Load shared lua function - see `shared.lua` in rmarkdown for more details.
 13 | --  * pandocAvailable()
 14 | --  * pandoc_type() function (backward compatible type() after 2.17 changes)
 15 | --  * print_debug()
 16 | dofile(os.getenv 'RMARKDOWN_LUA_SHARED')
 17 | 
 18 | --[[
 19 |   About the requirement:
 20 |   * PANDOC_VERSION -> 2.2.3
 21 | ]]
 22 | if (not pandocAvailable {2,2,3}) then
 23 |     io.stderr:write("[WARNING] (jss.lua) requires at least Pandoc 2.1. Lua Filter skipped.\n")
 24 |     return {}
 25 | end
 26 | 
 27 | -- START OF THE FILTER'S FUNCTIONS --
 28 | 
 29 | local isInteger = function(number)
 30 |   return math.floor(number) == number
 31 | end
 32 | 
 33 | local padVolume = function(volume)
 34 |   local volumeString = tostring(volume)
 35 |   if volume < 10 then return "00" .. volumeString end
 36 |   if volume < 100 then return "0" .. volumeString end
 37 |   return volumeString
 38 | end
 39 | 
 40 | local padIssue = function(issue)
 41 |   local issueString = tostring(issue)
 42 |   if issue < 10 then return "0" .. issueString end
 43 |   return issueString
 44 | end
 45 | 
 46 | local getDOI = function(volume, issue)
 47 |   -- store a fallback DOI
 48 |   local fallback = "10.18637/jss.v000.i00"
 49 | 
 50 |   -- if volume or issue is missing, return the fallback DOI
 51 |   if not volume or not issue then return fallback end
 52 | 
 53 |   local volumeNumber = tonumber(pandoc.utils.stringify(volume))
 54 |   local issueNumber = tonumber(pandoc.utils.stringify(issue))
 55 | 
 56 |   -- if volume or issue cannot be coerced to a number, return the fallback DOI
 57 |   if not volumeNumber or not issueNumber then return fallback end
 58 | 
 59 |   -- if volume or issue is a number lesser than 1, return the fallback DOI
 60 |   if volumeNumber < 1 or issueNumber < 1 then return fallback end
 61 | 
 62 |   -- if volume or issue is not an integer, return the fallback DOI
 63 |   if not isInteger(volumeNumber) or not isInteger(issueNumber) then return fallback end
 64 | 
 65 |   -- build the DOI
 66 |   return "10.18637/jss.v" .. padVolume(volumeNumber) .. ".i" .. padIssue(issueNumber)
 67 | end
 68 | 
 69 | Meta = function(meta)
 70 |   ---------------------------------------
 71 |   --           Keywords                --
 72 |   ---------------------------------------
 73 |   -- Test if there is one keyword:
 74 |   if not meta.keywords then error("At least one keyword must be supplied.") end
 75 |   -- Store plain keywords:
 76 |   local plainKeywords = {}
 77 | 
 78 |   if pandoc_type(meta.keywords) == "List" then
 79 |     for i, v in ipairs(meta.keywords) do
 80 |       plainKeywords[i] = pandoc.utils.stringify(v)
 81 |     end
 82 |   else
 83 |     -- we have only one keyword
 84 |     plainKeywords = {pandoc.utils.stringify(meta.keywords)}
 85 |   end
 86 | 
 87 |   meta["keywords-plain"] = plainKeywords
 88 | 
 89 |   ---------------------------------------
 90 |   --              Author               --
 91 |   ---------------------------------------
 92 |   local author = meta.author
 93 | 
 94 |   if pandoc_type(author) == "Inlines" then
 95 |     meta.author = {data = author, rank = "1"}
 96 |   else
 97 |     for i, v in ipairs(author) do
 98 |       meta.author[i] = {data = v, rank = tostring(i)}
 99 |     end
100 |   end
101 | 
102 |   ----------------------------------------
103 |   --  Build DOI from volume and issue   --
104 |   ----------------------------------------
105 |   meta.doi = getDOI(meta.volume, meta.issue)
106 | 
107 |   ----------------------------------------
108 |   -- Fallback values for missing params --
109 |   ----------------------------------------
110 |   if not meta.month then meta.month = "MMMMMM" end
111 |   if not meta.year then meta.year = "YYYY" end
112 |   if not meta.volume then meta.volume = "VV" end
113 |   if not meta.issue then meta.issue = "II" end
114 |   if not meta.submitdate then meta.submitdate = "yyyy-mm-dd" end
115 |   if not meta.acceptdate then meta.acceptdate = "yyyy-mm-dd" end
116 | 
117 |   return meta
118 | end
119 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/html-letter/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
 1 | ---
 2 | title: "A letter of recommendation for Emi Tanaka"
 3 | author: "Yihui Xie"
 4 | output:
 5 |   pagedown::html_letter:
 6 |     self_contained: false
 7 | links-to-footnotes: true
 8 | paged-footnotes: true
 9 | # uncomment this line to produce HTML and PDF in RStudio:
10 | #knit: pagedown::chrome_print
11 | ---
12 | 
13 | ![The Posit logo](https://posit.co/wp-content/themes/Posit/dist/images/site-share-image.jpg){.logo}
14 | 
15 | ::: from
16 | Yihui Xie  
17 | In the Middle of Nowhere  
18 | Omaha, NE 68022  
19 | Email: xie@yihui.name  
20 | Homepage: https://yihui.name
21 | :::
22 | 
23 | 
24 | Hiring Manager  
25 | School of Ninja, Hacker's University  
26 | 404 Not Found Road, Undefined 0x1234, NA
27 | 
28 | ::: date
29 | December 32, 2018
30 | :::
31 | 
32 | Dear Hiring Manager,
33 | 
34 | It is my honor and pleasure to write a letter of recommendation^[Is this the first letter that contains GIFs ever in the history of human?] for Dr. Emi Tanaka, a great hacker in my eyes.
35 | 
36 | Emi said [it was heck of a praise](https://twitter.com/statsgen/status/1023118510745038848) when I said Earo was a very impressive hacker. Well, the fact is that I have been actually impressed many more times by Emi, which is probably because Earo is a relatively low-key hacker, and I have seen a lot of cool things Emi posted on Twitter this year. If I were to write a full letter about them, it would probably take me two whole days. Below is a one-hour attempt to show the many ways in which she can be so cool.
37 | 
38 | ![The kunoichi theme for xaringan, made by Emi](https://github.com/emitanaka/ninja-theme/raw/master/docs/images/kunoichi-showcase.gif)
39 | 
40 | - She added the [ninja themes to **xaringan**](https://github.com/yihui/xaringan/pull/165).
41 | 
42 | - [The **anicon** package](https://twitter.com/statsgen/status/1021683550171496449) to insert animated icons or images or [text](https://twitter.com/statsgen/status/1010323499901075456) in R Markdown / **xaringan** / Shiny.
43 | 
44 | - [The **datalegreyar** package](https://twitter.com/statsgen/status/1018823773162618882) that uses a special typeface to represent data directly with text (which is an even smarter idea than sparklines). Magic.
45 | 
46 | - [She discovered the ultimate secret](https://twitter.com/statsgen/status/1012664098616590336) of the "Infinite Moon Reader" in **xaringan**: when an HTML page is automatically refreshed, the scroll position is preserved. This is extremely helpful when the document is long or has many pages, because otherwise you will have to scroll like crazy to the position where you last viewed. This feature is quite subtle and has been there for almost two years, and Emi was the first person (to my knowledge) who had discovered it and been excited about it.
47 | 
48 | - Obviously she is very good at hacking with CSS. [Look at her **xaringan** slides](https://twitter.com/statsgen/status/1009591310150299648) with the shiny (I mean sparkling) r-ladies theme, and the content is pretty good, too!
49 | 
50 | - [The joy over FiraCode](https://twitter.com/statsgen/status/993662737099079680) (as it was supported in RStudio).
51 | 
52 | - She wrote [one of the bestest **blogdown** tutorials](https://twitter.com/statsgen/status/993003327074926592) (the level of details is amazing).
53 | 
54 | - And [people truly appreciated](https://twitter.com/certifiedwaif/status/1029640487399915520) her **blogdown** seminar.
55 | 
56 | - Her website is one of the most beautiful websites I have seen. In particular, [everyone loved her showcase.](https://twitter.com/statsgen/status/990422351593406464) Did I mention that it was actually one of the four websites I highlighted [in the R Markdown book](https://bookdown.org/yihui/rmarkdown/basics-examples.html)?
57 | 
58 | - [The shiny custom loader.](https://twitter.com/statsgen/status/972727676459872256) Hahaha. [Super fun](https://twitter.com/statsgen/status/975321139550478336), and magic.
59 | 
60 | - [She can teach statistics courses.](https://twitter.com/statsgen/status/1001293550531694592) I barely remember what linear mixed models are.
61 | 
62 | - And [she just started answering](https://stackoverflow.com/a/51575804/559676) #rstats questions on Stack Overflow the other day! Thank you!!
63 | 
64 | Creative, enthusiastic, excellent taste of design, with great attention to details. That is my overall impression of this hacker.^[This letter was originally published in my blog at https://yihui.name/en/2018/07/emi-tanaka/.]
65 | 
66 | ![The hacker's way of parking](https://slides.yihui.name/gif/impossible-parking.gif)
67 | 
68 | ![Yihui's signature](https://user-images.githubusercontent.com/163582/47831497-c6656c00-dd5e-11e8-87b3-1f03fa97baa0.png)  
69 | Yihui Xie  
70 | Software Engineer  
71 | RStudio, PBC
72 | 


--------------------------------------------------------------------------------
/man/chrome_print.Rd:
--------------------------------------------------------------------------------
  1 | % Generated by roxygen2: do not edit by hand
  2 | % Please edit documentation in R/chrome.R
  3 | \name{chrome_print}
  4 | \alias{chrome_print}
  5 | \title{Print a web page to PDF or capture a screenshot using the headless Chrome}
  6 | \usage{
  7 | chrome_print(
  8 |   input,
  9 |   output = xfun::with_ext(input, format),
 10 |   wait = 2,
 11 |   browser = "google-chrome",
 12 |   format = c("pdf", "png", "jpeg"),
 13 |   options = list(),
 14 |   selector = "body",
 15 |   box_model = c("border", "content", "margin", "padding"),
 16 |   scale = 1,
 17 |   work_dir = tempfile(),
 18 |   timeout = 30,
 19 |   extra_args = c("--disable-gpu"),
 20 |   verbose = 0,
 21 |   async = FALSE,
 22 |   outline = gs_available(),
 23 |   encoding
 24 | )
 25 | }
 26 | \arguments{
 27 | \item{input}{A URL or local file path to an HTML page, or a path to a local
 28 | file that can be rendered to HTML via \code{rmarkdown::\link[rmarkdown]{render}()}
 29 | (e.g., an R Markdown document or an R script). If the \code{input} is to be
 30 | rendered via \code{rmarkdown::render()} and you need to pass any arguments
 31 | to it, you can pass the whole \code{render()} call to
 32 | \code{chrome_print()}, e.g., if you need to use the \code{params} argument:
 33 | \code{pagedown::chrome_print(rmarkdown::render('input.Rmd', params =
 34 | list(foo = 1:10)))}. This is because \code{render()} returns the HTML file,
 35 | which can be passed to \code{chrome_print()}.}
 36 | 
 37 | \item{output}{The output filename. For a local web page \file{foo/bar.html},
 38 | the default PDF output is \file{foo/bar.pdf}; for a remote URL
 39 | \file{https://www.example.org/foo/bar.html}, the default output will be
 40 | \file{bar.pdf} under the current working directory. The same rules apply
 41 | for screenshots.}
 42 | 
 43 | \item{wait}{The number of seconds to wait for the page to load before
 44 | printing (in certain cases, the page may not be immediately ready for
 45 | printing, especially there are JavaScript applications on the page, so you
 46 | may need to wait for a longer time).}
 47 | 
 48 | \item{browser}{Path to Google Chrome, Microsoft Edge or Chromium. This
 49 | function will try to find it automatically via \code{\link{find_chrome}()}
 50 | if the path is not explicitly provided and the environment variable
 51 | \code{PAGEDOWN_CHROME} is not set.}
 52 | 
 53 | \item{format}{The output format.}
 54 | 
 55 | \item{options}{A list of page options. See
 56 | \code{https://chromedevtools.github.io/devtools-protocol/tot/Page#method-printToPDF}
 57 |  for the full list of options for PDF output, and
 58 | \code{https://chromedevtools.github.io/devtools-protocol/tot/Page#method-captureScreenshot}
 59 |  for options for screenshots. Note that for PDF output, we have changed the
 60 | defaults of \code{printBackground} (\code{TRUE}),
 61 | \code{preferCSSPageSize} (\code{TRUE}) and when available
 62 | \code{transferMode} (\code{ReturnAsStream}) in this function.}
 63 | 
 64 | \item{selector}{A CSS selector used when capturing a screenshot.}
 65 | 
 66 | \item{box_model}{The CSS box model used when capturing a screenshot.}
 67 | 
 68 | \item{scale}{The scale factor used for screenshot.}
 69 | 
 70 | \item{work_dir}{Name of headless Chrome working directory. If the default
 71 | temporary directory doesn't work, you may try to use a subdirectory of your
 72 | home directory.}
 73 | 
 74 | \item{timeout}{The number of seconds before canceling the document
 75 | generation. Use a larger value if the document takes longer to build.}
 76 | 
 77 | \item{extra_args}{Extra command-line arguments to be passed to Chrome.}
 78 | 
 79 | \item{verbose}{Level of verbosity: \code{0} means no messages; \code{1} means
 80 | to print out some auxiliary messages (e.g., parameters for capturing
 81 | screenshots); \code{2} (or \code{TRUE}) means all messages, including those
 82 | from the Chrome processes and WebSocket connections.}
 83 | 
 84 | \item{async}{Execute \code{chrome_print()} asynchronously? If \code{TRUE},
 85 | \code{chrome_print()} returns a \code{\link[promises]{promise}} value (the
 86 | \pkg{promises} package has to be installed in this case).}
 87 | 
 88 | \item{outline}{If not \code{FALSE}, \code{chrome_print()} will add the
 89 | bookmarks to the generated \code{pdf} file, based on the table of contents
 90 | informations. This feature is only available for output formats based on
 91 | \code{\link{html_paged}}. It is enabled by default, as long as the
 92 | Ghostscript executable can be detected by \code{\link[tools]{find_gs_cmd}}.}
 93 | 
 94 | \item{encoding}{Not used. This argument is required by RStudio IDE.}
 95 | }
 96 | \value{
 97 | Path of the output file (invisibly). If \code{async} is \code{TRUE},
 98 |   this is a \code{\link[promises]{promise}} value.
 99 | }
100 | \description{
101 | Print an HTML page to PDF or capture a PNG/JPEG screenshot through the Chrome
102 | DevTools Protocol. Google Chrome or Microsoft Edge (or Chromium on Linux)
103 | must be installed prior to using this function.
104 | }
105 | \references{
106 | \url{https://developer.chrome.com/blog/headless-chrome/}
107 | }
108 | 


--------------------------------------------------------------------------------
/inst/resources/js/config.js:
--------------------------------------------------------------------------------
  1 | // Configuration script for paged.js
  2 | 
  3 | (function() {
  4 |   // Retrieve previous config object if defined
  5 |   window.PagedConfig = window.PagedConfig || {};
  6 |   const {before: beforePaged, after: afterPaged} = window.PagedConfig;
  7 | 
  8 |   // utils
  9 |   const insertCSS = text => {
 10 |     let style = document.createElement('style');
 11 | 		style.type = 'text/css';
 12 | 		style.appendChild(document.createTextNode(text));
 13 |     document.head.appendChild(style);
 14 |   };
 15 | 
 16 |   // Util function for front and back covers images
 17 |   const insertCSSForCover = type => {
 18 |     const links = document.querySelectorAll('link[id^=' + type + ']');
 19 |     if (!links.length) return;
 20 |     const re = new RegExp(type + '-\\d+');
 21 |     let text = ':root {--' + type + ': var(--' + type + '-1);';
 22 |     for (const link of links) {
 23 |       text += '--' + re.exec(link.id)[0] + ': url("' + link.href + '");';
 24 |     }
 25 |     text += '}';
 26 |     insertCSS(text);
 27 |   };
 28 | 
 29 |   const insertPageBreaksCSS = () => {
 30 |     insertCSS(`
 31 |     .page-break-after {break-after: page;}
 32 |     .page-break-before {break-before: page;}
 33 |     `);
 34 |   };
 35 | 
 36 |   window.PagedConfig.before = async () => {
 37 |     // Front and back covers support
 38 |     let frontCover = document.querySelector('.front-cover');
 39 |     let backCover = document.querySelector('.back-cover');
 40 |     if (frontCover) document.body.prepend(frontCover);
 41 |     if (backCover) document.body.append(backCover);
 42 |     insertCSSForCover('front-cover');
 43 |     insertCSSForCover('back-cover');
 44 |     insertPageBreaksCSS();
 45 | 
 46 |     if (beforePaged) await beforePaged();
 47 |   };
 48 | 
 49 |   // from https://stackoverflow.com/q/21647928
 50 |   const toUTF16BE = x => {
 51 |     let res = '';
 52 |     for (i=0; i < x.length; i++) {
 53 |       let hex = x.charCodeAt(i).toString(16);
 54 |       hex = ('000' + hex).slice(-4);
 55 |       res += hex
 56 |     }
 57 |     res = 'feff' + res ;
 58 |     return res;
 59 |   }
 60 | 
 61 |   const findPage = el => {
 62 |     while (el.parentElement) {
 63 |       el = el.parentElement;
 64 |       if (el.getAttribute('data-page-number')) {
 65 |         return parseInt(el.getAttribute('data-page-number'));
 66 |       }
 67 |     }
 68 |     return null;
 69 |   };
 70 | 
 71 |   const tocEntriesInfos = ul => {
 72 |     let result = []; // where we store the results
 73 |     // if there is no element, return an empty array
 74 |     if (!ul) {
 75 |       return result;
 76 |     }
 77 |     const tocEntries = ul.children; // tocEntries are 'li' elements
 78 | 
 79 |     for (const li of tocEntries) {
 80 |       // Since parts entries in TOC have no anchor,
 81 |       // do not use them in the PDF outline.
 82 |       if (li.classList.contains('part')) {
 83 |         continue;
 84 |       }
 85 | 
 86 |       // get the title and encode it in UTF16BE (pdfmark is encoded in UTF16BE with BOM)
 87 |       const title = toUTF16BE(li.querySelector('a').textContent);
 88 | 
 89 |       // get the page number
 90 |       const href = li.querySelector('a').getAttribute('href');
 91 |       const el = document.getElementById(href.substring(1));
 92 |       const page = findPage(el);
 93 | 
 94 |       // get the children
 95 |       children = tocEntriesInfos(li.querySelector('ul'));
 96 | 
 97 |       result.push({
 98 |         title: title,
 99 |         page: page,
100 |         children: children
101 |       });
102 |     }
103 | 
104 |     return result;
105 |   };
106 |   window.PagedConfig.after = (flow) => {
107 |     // force redraw, see https://github.com/rstudio/pagedown/issues/35#issuecomment-475905361
108 |     // and https://stackoverflow.com/a/24753578/6500804
109 |     document.body.style.display = 'none';
110 |     document.body.offsetHeight;
111 |     document.body.style.display = '';
112 | 
113 |     // run previous PagedConfig.after function if defined
114 |     if (afterPaged) afterPaged(flow);
115 | 
116 |     // pagedownListener is a binding added by the chrome_print function
117 |     // this binding exists only when chrome_print opens the html file
118 |     if (window.pagedownListener) {
119 |       // the html file is opened for printing
120 |       // call the binding to signal to the R session that Paged.js has finished
121 |       const tocList = flow.source.querySelector('.toc > ul');
122 |       const tocInfos = tocEntriesInfos(tocList);
123 |       pagedownListener(JSON.stringify({
124 |         pagedjs: true,
125 |         pages: flow.total,
126 |         elapsedtime: flow.performance,
127 |         tocInfos: tocInfos
128 |       }));
129 |       return;
130 |     }
131 |     if (sessionStorage.getItem('pagedown-scroll')) {
132 |       // scroll to the last position before the page is reloaded
133 |       window.scrollTo(0, sessionStorage.getItem('pagedown-scroll'));
134 |       return;
135 |     }
136 |     if (window.location.hash) {
137 |       const id = decodeURIComponent(window.location.hash).replace(/^#/, '');
138 |       document.getElementById(id).scrollIntoView({behavior: 'smooth'});
139 |     }
140 |   };
141 | })();
142 | 


--------------------------------------------------------------------------------
/inst/resources/css/default.css:
--------------------------------------------------------------------------------
  1 | :root {
  2 |   --background: whitesmoke;
  3 |   --pagedjs-width: 6in;
  4 |   --pagedjs-height: 9in;
  5 |   --color-paper: white;
  6 |   --color-mbox: rgba(0, 0, 0, 0.2);
  7 |   --running-title-width: 2.5in;
  8 |   --screen-pages-spacing: 5mm;
  9 | }
 10 | 
 11 | html {
 12 |   line-height: 1.3;
 13 | }
 14 | 
 15 | /* generated content */
 16 | a[href^="http"]:not([class="uri"])::after {
 17 |   content: " (" attr(href) ")";
 18 |   font-size: 90%;
 19 |   hyphens: none;
 20 |   word-break: break-all;
 21 | }
 22 | .references a[href^=http]:not([class=uri])::after {
 23 |   content: none;
 24 | }
 25 | .main a[href^="#"]:not([class^="footnote-"]):not([href*=":"])::after {
 26 |   content: " (page " target-counter(attr(href), page) ")";
 27 | }
 28 | .main a.front-matter-ref[href^="#"]:not([class^="footnote-"]):not([href*=":"])::after {
 29 |   content: " (page " target-counter(attr(href), page, lower-roman) ")";
 30 | }
 31 | /* do not include page references in code blocks */
 32 | .sourceCode a[href^="#"]:not([class^="footnote-"]):not([href*=":"])::after,
 33 | .sourceCode a.front-matter-ref[href^="#"]:not([class^="footnote-"]):not([href*=":"])::after {
 34 |   content: unset;
 35 | }
 36 | 
 37 | /* TOC, LOT, LOF */
 38 | .toc ul, .lot ul, .lof ul {
 39 |   list-style: none;
 40 |   padding-left: 0;
 41 |   overflow-x: clip;
 42 | }
 43 | .toc li li {
 44 |   padding-left: 1em;
 45 | }
 46 | .toc a, .lot a, .lof a {
 47 |   text-decoration: none;
 48 |   background: white;
 49 |   padding-right: .33em;
 50 | }
 51 | .toc a::after, .lot a::after, .lof a::after {
 52 |   /* content: leader(dotted) target-counter(attr(href), page); */
 53 |   content: target-counter(attr(href), page);
 54 |   float: right;
 55 |   background: white;
 56 | }
 57 | .toc a.front-matter-ref::after, .lot a.front-matter-ref::after, .lof a.front-matter-ref::after {
 58 |   /* content: leader(dotted) target-counter(attr(href), page, lower-roman); */
 59 |   content: target-counter(attr(href), page, lower-roman);
 60 | }
 61 | .toc .leaders::before, .lot .leaders::before, .lof .leaders::before {
 62 |   float: left;
 63 |   width: 0;
 64 |   white-space: nowrap;
 65 |   content: ". . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ";
 66 | }
 67 | 
 68 | /* Chapter name */
 69 | .chapter > h1 > .header-section-number::before, .chapter-ref > .toc-section-number::before {
 70 |   content: var(--chapter-name-before, "Chapter ");
 71 | }
 72 | .chapter > h1 > .header-section-number::after, .chapter-ref > .toc-section-number::after {
 73 |   content: var(--chapter-name-after, "");
 74 | }
 75 | 
 76 | /* misc elements */
 77 | .subtitle span {
 78 |   font-size: .9em;
 79 | }
 80 | img {
 81 |   max-width: 100%;
 82 | }
 83 | pre {
 84 |   padding: 1em;
 85 |   white-space: pre-wrap;
 86 | }
 87 | pre[class] {
 88 |   background: #f9f9f9;
 89 | }
 90 | abbr {
 91 |   text-decoration: none;
 92 | }
 93 | 
 94 | @media screen {
 95 |   div.sourceCode {
 96 |     overflow: visible !important;
 97 |   }
 98 |   a.sourceLine::before {
 99 |     text-decoration: unset !important;
100 |   }
101 | }
102 | pre.numberSource a.sourceLine {
103 |   left: 0 !important;
104 |   text-indent: -5em
105 | }
106 | pre.numberSource {
107 |   margin-left: 0 !important;
108 | }
109 | table {
110 |   margin: auto;
111 |   border-top: 1px solid #666;
112 |   border-bottom: 1px solid #666;
113 | }
114 | table thead th {
115 |   border-bottom: 1px solid #ddd;
116 | }
117 | thead, tfoot, tr:nth-child(even) {
118 |   background: #eee;
119 | }
120 | /* knitr::kables styling, see https://github.com/rstudio/pagedown/issues/214 */
121 | .kable_wrapper > tbody > tr > td {
122 |     vertical-align: top;
123 | }
124 | .footnotes {
125 |   font-size: 90%;
126 | }
127 | .footnotes hr::before {
128 |   content: "Footnotes:";
129 | }
130 | .footnotes hr {
131 |   border: none;
132 | }
133 | .footnote-break {
134 |   width: 1in;
135 | }
136 | body {
137 |   hyphens: auto;
138 | }
139 | code {
140 |   hyphens: none;
141 | }
142 | 
143 | /* two pages in a row if possible on screen */
144 | @media screen {
145 |   body {
146 |     background-color: var(--background);
147 |     margin: var(--screen-pages-spacing) auto 0 auto;
148 |   }
149 |   .pagedjs_pages {
150 |     display: flex;
151 |     max-width: calc(var(--pagedjs-width) * 2);
152 |     flex: 0;
153 |     flex-wrap: wrap;
154 |     margin: 0 auto;
155 |   }
156 |   .pagedjs_page {
157 |     background-color: var(--color-paper);
158 |     box-shadow: 0 0 0 1px var(--color-mbox);
159 |     flex-shrink: 0;
160 |     flex-grow: 0;
161 |     margin: auto auto var(--screen-pages-spacing) auto;
162 |   }
163 | }
164 | 
165 | /* when a row can hold two pages, start first page on the right */
166 | @media screen and (min-width: 12.32in) {
167 |   .pagedjs_page {
168 |     margin: auto 0 var(--screen-pages-spacing) 0;
169 |   }
170 |   .pagedjs_first_page {
171 |     margin-left: var(--pagedjs-width);
172 |   }
173 | }
174 | 
175 | /* use a fixed width body for mobiles */
176 | @media screen and (max-width:1180px)  {
177 |   body {
178 |     width: calc(var(--pagedjs-width) + 2 * var(--screen-pages-spacing));
179 |   }
180 | }
181 | 


--------------------------------------------------------------------------------
/README.md:
--------------------------------------------------------------------------------
 1 | # pagedown <img src="man/figures/logo.png" align="right" height="138" />
 2 | 
 3 | <!-- badges: start -->
 4 | [![R-CMD-check](https://github.com/rstudio/pagedown/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/rstudio/pagedown/actions/workflows/R-CMD-check.yaml)
 5 | [![Downloads from the RStudio CRAN mirror](https://cranlogs.r-pkg.org/badges/pagedown)](https://cran.r-project.org/package=pagedown)
 6 | <!-- badges: end -->
 7 | 
 8 | Paginate the HTML Output of R Markdown with CSS for Print. You only need a modern web browser (e.g., Google Chrome or Microsoft Edge) to generate PDF. No need to install LaTeX to get beautiful PDFs.
 9 | 
10 | This R package stands on the shoulders of two giants to support typesetting with CSS for R Markdown documents: [Paged.js](https://pagedjs.org) and [ReLaXed](https://github.com/RelaxedJS/ReLaXed) (we only borrowed some CSS from the ReLaXed repo and didn't really use the Node package).
11 | 
12 | You may install this package from Github:
13 | 
14 | ```r
15 | # install.packages("pak")
16 | pak::pak('rstudio/pagedown')
17 | ```
18 | 
19 | This package requires a recent version of Pandoc (>= 2.2.3). If you use RStudio, you are recommended to install the [latest version](https://posit.co/download/rstudio-desktop/) (>= 1.2.1335), which has bundled Pandoc 2.x, otherwise you need to install Pandoc separately.
20 | 
21 | Below are some existing R Markdown output formats and examples.
22 | 
23 | ## Paged HTML documents (`pagedown::html_paged`)
24 | 
25 | [![A paged HTML document](https://user-images.githubusercontent.com/163582/47673682-58b11880-db83-11e8-87fd-b5e753af7288.png)](https://pagedown.rbind.io)
26 | 
27 | ### Thesis (`pagedown::thesis_paged`)
28 | 
29 | [![A paged HTML thesis](https://user-images.githubusercontent.com/19177171/60126180-b129cb80-978d-11e9-8e32-7ba48f303b6f.png)](https://pagedown.rbind.io/thesis-paged/)
30 | 
31 | ### Journal of Statistical Software article (`pagedown::jss_paged`)
32 | 
33 | [![A JSS article](https://user-images.githubusercontent.com/19177171/51005498-5b46cb80-153f-11e9-9026-4b50a9f3d3f1.png)](https://pagedown.rbind.io/jss-paged/)
34 | 
35 | ## Resume (`pagedown::html_resume`)
36 | 
37 | [![An HTML resume](https://user-images.githubusercontent.com/163582/46879762-7a34a500-ce0c-11e8-87e3-496f3577ff05.png)](https://pagedown.rbind.io/html-resume/)
38 | 
39 | You may want to check out [the **datadrivencv** package](https://github.com/nstrayer/datadrivencv), which allows you to build a CV using data from a spreadsheet and `pagedown::html_resume`.
40 | 
41 | ## Posters
42 | 
43 | ### `pagedown::poster_relaxed`
44 | 
45 | [![A poster of the ReLaXed style](https://user-images.githubusercontent.com/163582/47672385-e12dba00-db7f-11e8-92de-af94d5bab12f.jpg)](https://pagedown.rbind.io/poster-relaxed/)
46 | 
47 | ### `pagedown::poster_jacobs`
48 | 
49 | [![A poster of the Jacobs University style](https://user-images.githubusercontent.com/163582/49780277-7b326780-fcd3-11e8-9eb6-69e46292158c.png)](https://pagedown.rbind.io/poster-jacobs/)
50 | 
51 | Want more poster styles? You may take a look at [Brent Thorne's **posterdown** package](https://github.com/brentthorne/posterdown).
52 | 
53 | ## Business cards (`pagedown::business_card`)
54 | 
55 | [![A business card](https://user-images.githubusercontent.com/163582/47741877-68933000-dc49-11e8-94f8-92724b67e9a6.png)](https://pagedown.rbind.io/business-card/)
56 | 
57 | ## Letters (`pagedown::html_letter`)
58 | 
59 | [![A letter in HTML](https://user-images.githubusercontent.com/163582/47872372-61e8f200-dddc-11e8-839b-d8e8ef8f51eb.png)](https://pagedown.rbind.io/html-letter)
60 | 
61 | ## Other examples
62 | 
63 | - Nick Strayer's CV: https://github.com/nstrayer/cv (also includes instructions on how to build your own CV).
64 | 
65 | - "Template of Exec Summaries with pagedown" by Joshua David Barillas: https://github.com/jdbarillas/executive_summary
66 | 
67 | - Ulrik Lyngs's CVs: https://ulyngs.github.io/pagedown-cv/
68 | 
69 | - Jiena Gu McLellan's CV: https://github.com/jienagu/Jiena_McLellan_CV
70 | 
71 | - Thomas Vroylandt's template for the French Scouts and Guides Association: https://github.com/tvroylandt/sgdf_pagedown
72 | 
73 | - Beatriz Milz's CV: https://beatrizmilz.github.io/resume/resume.html
74 | 
75 | - **pagedreport** by Thomas Vroylandt and David Keyes which helps using **pagedown** with some templates proposals: https://github.com/rfortherestofus/pagedreport
76 | 
77 | - Jodavid Ferreira's CV (in Portuguese) : https://jodavid.github.io/cv/ (source: https://github.com/jodavid/cv)
78 | 
79 | ## Authors and contributors
80 | 
81 | The main authors of this package are Yihui Xie (RStudio) and Romain Lesur. Romain has received a grant from the Shuttleworth Foundation for his work on both Paged.js and **pagedown**.
82 | 
83 | [![Shuttleworth Funded](https://user-images.githubusercontent.com/163582/49319242-72ff4e80-f4c1-11e8-89fe-d8749355d261.jpg)](https://www.shuttleworthfoundation.org)
84 | 
85 | You can find [the full list of contributors of **pagedown** here](https://github.com/rstudio/pagedown/graphs/contributors). We always welcome new contributions. In particular, if you are familiar with CSS, we'd love to include your contributions of more creative and beautiful CSS stylesheets in this package. It is also very helpful if you don't know CSS but just tell us the creative and beautiful web pages you have seen, since other CSS experts may be able to port them into **pagedown**.
86 | 


--------------------------------------------------------------------------------
/inst/resources/html/poster-relaxed.html:
--------------------------------------------------------------------------------
  1 | <!DOCTYPE html>
  2 | <html xmlns="http://www.w3.org/1999/xhtml"$if(lang)$ lang="$lang$" xml:lang="$lang$"$endif$>
  3 |   <head>
  4 |     <meta charset="utf-8" />
  5 |     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  6 |     <meta name="generator" content="pandoc" />
  7 |     <meta name="viewport" content="width=device-width, initial-scale=1">
  8 | 
  9 |     $for(author-meta)$<meta name="author" content="$author-meta$" />$endfor$
 10 |     $if(date-meta)$<meta name="date" content="$date-meta$" />$endif$
 11 |     <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
 12 | 
 13 |     $for(header-includes)$
 14 |     $header-includes$
 15 |     $endfor$
 16 | 
 17 |     $if(highlightjs)$
 18 |     <link rel="stylesheet" href="$highlightjs$/$if(highlightjs-theme)$$highlightjs-theme$$else$default$endif$.css" $if(html5)$$else$type="text/css" $endif$/>
 19 |     <script src="$highlightjs$/highlight.js"></script>
 20 |     <script type="text/javascript">hljs.configure({languages: []}); hljs.initHighlightingOnLoad();</script>
 21 |     $endif$
 22 | 
 23 |     $if(highlighting-css)$<style type="text/css">$highlighting-css$</style>$endif$
 24 | 
 25 |     $for(css)$
 26 |     <link rel="stylesheet" href="$css$" $if(html5)$$else$type="text/css" $endif$/>
 27 |     $endfor$
 28 | 
 29 |   </head>
 30 |   <body>
 31 | 
 32 | $for(include-before)$
 33 | $include-before$
 34 | $endfor$
 35 | 
 36 | $body$
 37 | 
 38 | <script type="text/javascript">
 39 | (function() {
 40 |   // add appropriate classes to h1 and its parent div
 41 |   var i, j, d, s, el, els = document.getElementsByTagName('h1');
 42 |   for (i = 0; i < els.length; i++) {
 43 |     el = els[i];
 44 |     el.parentNode.className += ' section-' + (i + 1);
 45 |     if (i === 0) continue;  // that's all we need for the poster title
 46 |     el.className += ' ui title ribbon label';  // poster sections
 47 |     s = el.firstElementChild;  // move the class from inner <span> to <h1>
 48 |     if (s) {
 49 |       el.className += ' ' + s.className;
 50 |       s.outerHTML = s.innerHTML;
 51 |     }
 52 |     el.parentNode.className += ' ui raised segment';
 53 |     // wrap everything except the h1 in a section into <div class="content">
 54 |     d = document.createElement('div');
 55 |     d.className = 'content';
 56 |     while (el.nextSibling) {
 57 |       d.append(el.nextSibling);
 58 |     }
 59 |     el.parentNode.append(d);
 60 |   }
 61 | 
 62 |   // turn h2 sections in <div class="member-cards"> into semantic ui's cards
 63 |   els = document.querySelectorAll('.member-cards');
 64 |   for (i = 0; i < els.length; i++) {
 65 |     el = els[i].querySelectorAll('h2');
 66 |     for (j = 0; j < el.length; j++) {
 67 |       s = el[j];
 68 |       d = document.createElement('div');
 69 |       d.className = 'ui card';
 70 |       d.innerHTML = '<div class="image"></div><div class="content">' +
 71 |         '<div class="header"></div><div class="meta"></div>' +
 72 |         '<div class="description"></div></div>'
 73 |       d.firstChild.innerHTML = s.nextElementSibling.querySelector('img').outerHTML;
 74 |       s.parentNode.removeChild(s.nextElementSibling);
 75 |       d.lastChild.children[0].innerHTML = s.innerHTML;
 76 |       d.lastChild.children[1].innerHTML = s.nextElementSibling.innerHTML;
 77 |       s.parentNode.removeChild(s.nextElementSibling);
 78 |       d.lastChild.children[2].innerHTML = s.nextElementSibling.innerHTML;
 79 |       s.parentNode.removeChild(s.nextElementSibling);
 80 |       s.parentNode.replaceChild(d, s);
 81 |     }
 82 |   }
 83 | 
 84 |   // remove the section divs for h2 - h5
 85 |   els = document.querySelectorAll('h2, h3, h4, h5');
 86 |   for (i = 0; i < els.length; i++) {
 87 |     el = els[i].parentNode;
 88 |     if (el && el.tagName === 'DIV' && /section level/.test(el.className)) {
 89 |       el.outerHTML = el.innerHTML;
 90 |     }
 91 |   }
 92 | 
 93 |   // replace <p><span class="foo">bar</span></p> with <div class="foo">bar</div>
 94 |   els = document.getElementsByTagName('p');
 95 |   for (i = 0; i < els.length;) {
 96 |     el = els[i]; i++;
 97 |     if (el.childElementCount !== 1) continue;
 98 |     s = el.firstElementChild;
 99 |     if (s.tagName !== 'SPAN' || s.outerHTML !== el.innerHTML) continue;
100 |     d = document.createElement('div');
101 |     d.innerHTML = s.innerHTML;
102 |     d.className = s.className;
103 |     el.parentNode.replaceChild(d, el);
104 |     i--;
105 |   }
106 | 
107 |   // break words in <a> if the text and uri are identical
108 |   els = document.getElementsByTagName('a');
109 |   for (i = 0; i < els.length; i++) {
110 |     el = els[i];
111 |     if (el.getAttribute('href') === el.innerText) el.style.wordBreak = 'break-all';
112 |   }
113 | })();
114 | </script>
115 | 
116 | $if(math)$
117 | $if(mathjax)$
118 | <!-- dynamically load mathjax for compatibility with self-contained -->
119 | <script>
120 |   (function () {
121 |     var script = document.createElement("script");
122 |     script.type = "text/javascript";
123 |     var src = `$mathjaxurl$` + "?config=TeX-MML-AM_CHTML";
124 |     if (location.protocol !== "file:" && /^https?:/.test(src))
125 |       src = src.replace(/^https?:/, '');
126 |     script.src = src;
127 |     document.getElementsByTagName("head")[0].appendChild(script);
128 |   })();
129 | </script>
130 | $endif$
131 | $endif$
132 | 
133 | $for(include-after)$
134 | $include-after$
135 | $endfor$
136 | 
137 |   </body>
138 | </html>
139 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/thesis-paged/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
  1 | ---
  2 | title: A paged html thesis template for R Markdown users
  3 | subtitle: A {pagedown} template.
  4 | author: 
  5 |   - name: William Brent Thorne
  6 |     edu: BSc
  7 | degree: Master of Documentation
  8 | institute: Typeset University
  9 | faculty: Reproducibility and FOSS
 10 | department: Templates
 11 | location: St. Catharines, ON 
 12 | date:
 13 |   - year: 2019
 14 |     month: August
 15 | sign_page: true
 16 | dedication: A dedication line or two goes here.
 17 | abstract: This is the abstract.
 18 | preface: A preface to the thesis.
 19 | acknowledge: Put the ackknowledgements here.
 20 | committee:
 21 |   - name: Jane Doe III
 22 |     prefix: Dr
 23 |     position: Chair of Department
 24 |   - name: John Smith
 25 |     prefix: Dr
 26 |     position: Faculty Advisor
 27 | lof: true
 28 | lot: true
 29 | toc-title: Contents
 30 | output:
 31 |   pagedown::thesis_paged: 
 32 |     toc: true
 33 |     number_sections: yes
 34 |     pandoc_args: --mathjax
 35 |     self_contained: no
 36 | bibliography: packages.bib
 37 | link-citations: yes
 38 | # uncomment this line to produce HTML and PDF in RStudio:
 39 | #knit: pagedown::chrome_print
 40 | ---
 41 | 
 42 | ```{r setup, include=FALSE}
 43 | knitr::opts_chunk$set(echo = FALSE,
 44 |                       fig.align = 'center')
 45 | ```
 46 | 
 47 | # Literature Review {-}
 48 | 
 49 | This is where you can include a lit review if you don't wish for it to be an individual chapter or to be numbered. To make sure that a section heading is not numbered use the `{-}` notation beside the header text like this:
 50 | 
 51 | _**rmarkdown**_:
 52 | 
 53 | ```markdown
 54 | # Literature Review {-}
 55 | 
 56 | This is where you can include a lit review if you don't wish for it to be an individual chapter or to be numbered. To make sure that a section heading is not numbered use the `{-}` notation beside the header text like this:
 57 | ```
 58 | 
 59 | # The Basics {.chapter}
 60 | 
 61 | ## Introduction
 62 | 
 63 | This template is based on the `pagedown::html_paged` template and modified to meet the requirements of a generic thesis document. Standard RMarkdown formatting can be used for smooth and distraction free writting, for example I will add a citation for the {knitr} package which is located in the `Thesis.bib` file auto-generated in this template [@R-knitr].
 64 | 
 65 | Thanks to the [help](https://github.com/rstudio/pagedown/issues/101) of [Romain Lesur](https://github.com/RLesur) this template has the ability to tag section headers with the word "Chapter ". To have your chapters display as this one (_Chapter 1 The Basics_) use the `{.chapter}` class like this:
 66 | 
 67 | _**rmarkdown**_
 68 | ```markdown
 69 | ---
 70 | output:
 71 |   pagedown::thesis_paged
 72 |     number_Sections: yes
 73 | ---
 74 | # The Basics {.chapter}
 75 | 
 76 | ## Introduction
 77 | 
 78 | This template is based on the `pagedown::html_paged` template...
 79 | ```
 80 | 
 81 | ## Second level heading
 82 | 
 83 | Here is some code and a plot, with a figure caption, Figure \@ref(fig:code):
 84 | 
 85 | ```{r code, fig.cap='The automatic numbering of this figure will only work if it includes a figure caption, user beware!'}
 86 | plot(iris$Sepal.Length,
 87 |      iris$Sepal.Width,
 88 |      col = iris$Species,
 89 |      pch = 19)
 90 | ```
 91 | 
 92 | Here is an example of an abbreviation where I use the `<abbr>` html tag <abbr title="Brent Thorne">BT</abbr>. In the future there may be a pandoc solution to abbreviation management, however <abbr title="Hyper Text Markup Language">HTML</abbr> is the way to go for now.
 93 | 
 94 | # Understanding the method to the madness {.chapter}
 95 | 
 96 | Need formulas? Here's some `mathjax` notation:
 97 | 
 98 | $$
 99 | \beta = \sum^{1 - k}\frac{\delta D}{\sum\frac{\Delta \gamma A}{X-i}}
100 | $$
101 | 
102 | ## Adding Tables
103 | 
104 | You can easily add tables to this document like so, and you can also reference them like a figure, Table \@ref(tab:atable):
105 | 
106 | ```{r atable}
107 | knitr::kable(
108 |   iris[1:4, 1:5],
109 |   align = 'c',
110 |   caption = 'A caption for the table.',
111 |   col.names = c("Sepal L", "Sepal W", "Petal L", "Petal W", "Species")
112 | )
113 | ```
114 | 
115 | # The final chapter to my pretend thesis {.chapter}
116 | 
117 | There are still a few features that would be nice to implement in the future for this template. For instance:
118 | 
119 | 1. It would be great to have the ability to use the [{redoc}](https://github.com/noamross/redoc) package to help those who have the ever dreaded "USE WORD ONLY" supervisors.
120 | 
121 | 2. It would also be great to have the ability to generate a _Reference_ section for each _Chapter_ for those who are writing in the "integrated article" format.
122 | 
123 | 3. Along with that, it would be great to pull the YAML data from a child .Rmd file and use it as a way to add the Chapter titles and any other subsequent information (for example a thesis chapter can often actually be a full manuscript and or published paper which would need to have all authors listed for that chapter specifically as well as the journal publication information/ citation data).
124 | 
125 | # References {-}
126 | 
127 | ```{r, include=FALSE}
128 | knitr::write_bib(c('knitr', 'rmarkdown', 'xaringan'), 'packages.bib')
129 | ```
130 | 
131 | <!-- This '<div id="refs"></div>' needs to 
132 | be here if you have appendix pages 
133 | otherwise you can remove it.-->
134 | <div id="refs"></div> 
135 | 
136 | # APPENDIX I {-}
137 | 
138 | ```{r}
139 | knitr::kable(iris[1:10,1:5], align = 'c')
140 | ```
141 | 


--------------------------------------------------------------------------------
/inst/resources/html/resume.html:
--------------------------------------------------------------------------------
  1 | <!DOCTYPE html>
  2 | <html xmlns="http://www.w3.org/1999/xhtml"$if(lang)$ lang="$lang$" xml:lang="$lang$"$endif$>
  3 |   <head>
  4 |     <meta charset="utf-8" />
  5 |     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  6 |     <meta name="generator" content="pandoc" />
  7 |     <meta name="viewport" content="width=device-width, initial-scale=1">
  8 | 
  9 |     $for(author-meta)$<meta name="author" content="$author-meta$" />$endfor$
 10 |     $if(date-meta)$<meta name="date" content="$date-meta$" />$endif$
 11 |     <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
 12 | 
 13 |     $if(math)$
 14 |     $if(mathjax)$
 15 |     <!-- dynamically load mathjax for compatibility with self-contained -->
 16 |     <script>
 17 |     (function() {
 18 |       // Retrieve previous config object if defined
 19 |       window.PagedConfig = window.PagedConfig || {};
 20 |       let beforePaged = PagedConfig.before;
 21 |       window.PagedConfig.before = async () => {
 22 |         if (beforePaged) await beforePaged();
 23 |         return new Promise((resolve, reject) => {
 24 |           var script = document.createElement("script");
 25 |           script.type = "text/javascript";
 26 |           var src = `$mathjaxurl$` + "?config=TeX-MML-AM_CHTML";
 27 |           if (location.protocol !== "file:" && /^https?:/.test(src))
 28 |             src = src.replace(/^https?:/, '');
 29 |           script.src = src;
 30 |           window.MathJax = {
 31 |             AuthorInit: () => {
 32 |               MathJax.Hub.Register.StartupHook("Begin", () => {
 33 |                 MathJax.Hub.Queue(resolve);
 34 |               });
 35 |             }
 36 |           };
 37 |           document.getElementsByTagName("head")[0].appendChild(script);
 38 |         });
 39 |       };
 40 |     })();
 41 |     </script>
 42 |     $endif$
 43 |     $endif$
 44 | 
 45 |     $for(header-includes)$
 46 |     $header-includes$
 47 |     $endfor$
 48 | 
 49 |     $for(css)$
 50 |     <link rel="stylesheet" href="$css$" $if(html5)$$else$type="text/css" $endif$/>
 51 |     $endfor$
 52 | 
 53 |   </head>
 54 |   <body>
 55 | $for(include-before)$
 56 | $include-before$
 57 | $endfor$
 58 | 
 59 | $body$
 60 | 
 61 | <script>
 62 | (function() {
 63 |   var i, s, j, el, els;
 64 |   var create_el = function(type, className, content, isHTML) {
 65 |     var el = document.createElement(type);
 66 |     if (className) el.className = className;
 67 |     if (content) {
 68 |       if (isHTML) {el.innerHTML = content;} else {el.innerText = content;}
 69 |     }
 70 |     return el;
 71 |   }
 72 | 
 73 |   // replace h2 title with h1
 74 |   var title = document.getElementById('title').querySelector('h2');
 75 |   title.parentNode.replaceChild(create_el('h1', false, title.innerHTML, true), title);
 76 | 
 77 |   // add the class .aside to #aside
 78 |   el = document.getElementById('aside');
 79 |   if (el) el.className += ' aside';
 80 | 
 81 |   // tweak class names of sections, and add icons
 82 |   els = document.getElementById('main').querySelectorAll('.level2');
 83 |   for (i = 0; i < els.length; i++) {
 84 |     el = els[i];
 85 |     if (i === 0 && el.id === 'title') continue;
 86 |     el.className += ' main-block';
 87 |     if (el.dataset['concise']) el.className += ' concise';
 88 |     // if there is no icon, add an icon:
 89 |     if (el.firstElementChild.firstChild && el.firstElementChild.firstChild.nodeName !== 'I') {
 90 |       s = el.dataset['icon'] || 'bookmark';
 91 |       el.firstElementChild.insertBefore(create_el('i', 'fa fa-' + s), el.firstElementChild.firstChild);
 92 |     }
 93 |   }
 94 | 
 95 |   // tweak class names of blocks in sections
 96 |   els = document.getElementById('main').querySelectorAll('.level3');
 97 |   for (i = 0; i < els.length; i++) {
 98 |     el = els[i];
 99 |     if (el.parentNode.id === 'title') continue;
100 |     el.className += ' blocks';
101 |     el.innerHTML = '<div class="date"></div>' + '<div class="decorator"></div>' +
102 |       '<div class="details"><header></header><div></div></div>' + el.innerHTML;
103 |     var ps = el.querySelectorAll('p');
104 |     // move the date paragraph to the date div
105 |     if (ps.length >= 3) {
106 |       s = ps[2].innerText;
107 |       s = s === 'N/A' ? [] : s.split(' - ');
108 |       el.removeChild(ps[2]);
109 |       for (j = 0; j < s.length && j < 2; j++) {
110 |         el.children[0].appendChild(create_el('span', false, s[j]))
111 |       }
112 |     }
113 |     // move title, description, location to the details div
114 |     (function(h) {
115 |       h.appendChild(el.children[3]);
116 |       var p = el.children[3];  // description
117 |       if (p.innerText !== 'N/A') {
118 |         h.appendChild(create_el('span', 'place', p.innerHTML, true));
119 |       }
120 |       el.removeChild(p);
121 |       p = el.children[3];  // location
122 |       if (p.innerText !== 'N/A') {
123 |         s = create_el('span', 'location', p.innerHTML, true);
124 |         s.innerHTML = '<i class="fa fa-map-marker-alt"></i> ' + s.innerHTML;
125 |         h.appendChild(s);
126 |       }
127 |       el.removeChild(p);
128 |     })(el.children[2].firstElementChild);
129 |     // move the rest of content in a block into the last div of the details div
130 |     s = el.children[2];
131 |     while (j = s.nextSibling) {
132 |       if (j.className === 'aside') { s = j; continue; }
133 |       el.children[2].lastElementChild.append(j);
134 |     }
135 |   }
136 | })();
137 | </script>
138 | 
139 | $for(include-after)$
140 | $include-after$
141 | $endfor$
142 | 
143 |   </body>
144 | </html>
145 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/poster-relaxed/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
  1 | ---
  2 | title: "An HTML poster example"
  3 | author: "Yihui Xie"
  4 | date: "`r Sys.Date()`"
  5 | output:
  6 |   pagedown::poster_relaxed:
  7 |     self_contained: false
  8 | bibliography: packages.bib
  9 | references:
 10 |   - id: remarkjs
 11 |     author:
 12 |     - family: Bang
 13 |       given: Ole Petter
 14 |     title: 'A simple, in-browser, markdown-driven slideshow tool'
 15 |     issued:
 16 |       year: 2018
 17 |     URL: https://remarkjs.com
 18 |   - id: naruto
 19 |     author:
 20 |     - family: Kishimoto
 21 |       given: Masashi
 22 |     title: 'Naruto Shippūden'
 23 |     issued:
 24 |       year: 2007
 25 |     URL: https://en.wikipedia.org/wiki/Naruto
 26 | ---
 27 | 
 28 | 
 29 | 
 30 | 
 31 | Presentation Ninja [with]{.tiny} R and xaringan
 32 | ================================================================================
 33 | 
 34 | In late 2016, Yihui discovered remark.js [@remarkjs] and loved it at the first sight. A few weeks later in the R Markdown ecosystem [@R-rmarkdown], an R package was born and named **xaringan** [@R-xaringan], which nobody knows how to pronounce (including Yihui himself, because it was adapted from the Japanese manga series Naruto by @naruto). Anyway, this package has gained some popularity, and some CSS ninja have started contributing themes to it. One day, Yihui was thinking about creating a gallery for existing themes in **xaringan**. After a few replies in the [Github issue](https://github.com/yihui/xaringan/issues/172), he realized there might be enough topics on **xaringan** for a short book. Accidentally, he invented a new development model for writing books: the Github-issue-driven book development.
 35 | 
 36 | 
 37 | 
 38 | 
 39 | [Authors]{.red}
 40 | ================================================================================
 41 | 
 42 | We are a team of shinobi and kunoichi who wish to share the fun and secrets of the **xaringan** package with you.
 43 | 
 44 | ::: member-cards
 45 | ## Emi Tanaka
 46 | 
 47 | ![Emi](https://avatars3.githubusercontent.com/u/7620319?s=400&v=4)
 48 | 
 49 | Lead author, and the ninja theme author
 50 | 
 51 | Emi laid out the first sketch of the book, which made Yihui believe that the book had been half-done.
 52 | 
 53 | ## Joseph Casillas
 54 | 
 55 | ![](https://avatars1.githubusercontent.com/u/1747068?s=400&v=4)
 56 | 
 57 | Contributor of **xaringan**
 58 | 
 59 | "Count me in," replied Joseph when Yihui asked who wanted to co-author the book.
 60 | 
 61 | ## Eric Nantz
 62 | 
 63 | ![](https://avatars0.githubusercontent.com/u/1043111?s=400&v=4)
 64 | 
 65 | Host of the R Podcast
 66 | 
 67 | Yihui is eager to know how much Eric's writing is better than his magnetic voice.
 68 | 
 69 | ## Yihui Xie
 70 | 
 71 | ![](https://avatars0.githubusercontent.com/u/163582?s=400&v=4)
 72 | 
 73 | Main author of **xaringan**
 74 | 
 75 | Yihui knows a bit about R/HTML/CSS/JS and wrote **knitr** [@R-knitr], which became a cornerstone of R Markdown.
 76 | :::
 77 | 
 78 | [All pictures above are from the authors' Github profiles. This poster was created via the R package [**pagedown**](https://github.com/rstudio/pagedown).]{.disclaimer}
 79 | 
 80 | 
 81 | 
 82 | 
 83 | [Motivation]{.blue}
 84 | ================================================================================
 85 | 
 86 | ```{r, include=FALSE}
 87 | lorem = 'Lorem ipsum dolor sit amet, consectetur adipiscing elit, sed do eiusmod tempor incididunt ut labore et dolore magna aliqua. Ut enim ad minim veniam, quis nostrud exercitation ullamco laboris nisi ut aliquip ex ea commodo consequat. Duis aute irure dolor in reprehenderit in voluptate velit esse cillum dolore eu fugiat nulla pariatur. Excepteur sint occaecat cupidatat non proident, qui officia deserunt mollit anim id est laborum.'
 88 | ```
 89 | 
 90 | ## There are many secrets about **xaringan**, **knitr**, and R Markdown to be revealed
 91 | 
 92 | `r lorem`
 93 | 
 94 | ![The **xaringan** logo, adapted from Sharingan of the Uchiha clan.](https://user-images.githubusercontent.com/163582/45438104-ea200600-b67b-11e8-80fa-d9f2a99a03b0.png)
 95 | 
 96 | ## HTML/CSS/JS are fun to play with
 97 | 
 98 | `r paste('-', strwrap(lorem, 230), collapse = '\n')`
 99 | 
100 | 
101 | 
102 | 
103 | [Schedule]{.pink}
104 | ================================================================================
105 | 
106 | ```{css, echo=FALSE}
107 | .section-4 {
108 |   background-image: url(https://upload.wikimedia.org/wikipedia/commons/7/7e/Mudra-Naruto-KageBunshin.svg) !important;
109 |   background-size: 40% !important;
110 |   background-position: right top !important;
111 |   background-repeat: no-repeat !important;
112 | }
113 | ```
114 | 
115 | 
116 | ## Outline (2018-12-15)
117 | 
118 | `r lorem`
119 | 
120 | ## Content (2019-03-01)
121 | 
122 | `r lorem`
123 | 
124 | ## Review and revision (2019-03-31)
125 | 
126 | `r lorem`
127 | 
128 | ## Copyediting (2019-04-20)
129 | 
130 | `r lorem`
131 | 
132 | ## Publishing (2019-05-30)
133 | 
134 | `r lorem`
135 | 
136 | 
137 | 
138 | 
139 | [Contents]{.green}
140 | ================================================================================
141 | 
142 | `r lorem`
143 | 
144 | `r lorem`
145 | 
146 | ```r
147 | # some nice R code here
148 | 1 + 1
149 | fit = lm(dist ~ speed, cars)
150 | ```
151 | `r lorem`
152 | 
153 | ![The most well-known feature of **xaringan**: the random Moustache Karl (aka `yolo = TRUE`).](https://github.com/yihui/xaringan/releases/download/v0.0.2/karl-moustache.jpg)
154 | 
155 | `r lorem`
156 | 
157 | $$\bar{X}=\frac{1}{n}\sum_{i=1}^nX_i$$
158 | 
159 | `r lorem`
160 | 
161 | 
162 | 
163 | 
164 | [Bibliography]{.yellow}
165 | ================================================================================
166 | 
167 | ```{r, include=FALSE}
168 | knitr::write_bib(c('knitr', 'rmarkdown', 'xaringan'), 'packages.bib')
169 | ```
170 | 


--------------------------------------------------------------------------------
/.github/CODE_OF_CONDUCT.md:
--------------------------------------------------------------------------------
  1 | # Contributor Covenant Code of Conduct
  2 | 
  3 | ## Our Pledge
  4 | 
  5 | We as members, contributors, and leaders pledge to make participation in our
  6 | community a harassment-free experience for everyone, regardless of age, body
  7 | size, visible or invisible disability, ethnicity, sex characteristics, gender
  8 | identity and expression, level of experience, education, socio-economic status,
  9 | nationality, personal appearance, race, caste, color, religion, or sexual
 10 | identity and orientation.
 11 | 
 12 | We pledge to act and interact in ways that contribute to an open, welcoming,
 13 | diverse, inclusive, and healthy community.
 14 | 
 15 | ## Our Standards
 16 | 
 17 | Examples of behavior that contributes to a positive environment for our
 18 | community include:
 19 | 
 20 | * Demonstrating empathy and kindness toward other people
 21 | * Being respectful of differing opinions, viewpoints, and experiences
 22 | * Giving and gracefully accepting constructive feedback
 23 | * Accepting responsibility and apologizing to those affected by our mistakes,
 24 |   and learning from the experience
 25 | * Focusing on what is best not just for us as individuals, but for the overall
 26 |   community
 27 | 
 28 | Examples of unacceptable behavior include:
 29 | 
 30 | * The use of sexualized language or imagery, and sexual attention or advances of
 31 |   any kind
 32 | * Trolling, insulting or derogatory comments, and personal or political attacks
 33 | * Public or private harassment
 34 | * Publishing others' private information, such as a physical or email address,
 35 |   without their explicit permission
 36 | * Other conduct which could reasonably be considered inappropriate in a
 37 |   professional setting
 38 | 
 39 | ## Enforcement Responsibilities
 40 | 
 41 | Community leaders are responsible for clarifying and enforcing our standards of
 42 | acceptable behavior and will take appropriate and fair corrective action in
 43 | response to any behavior that they deem inappropriate, threatening, offensive,
 44 | or harmful.
 45 | 
 46 | Community leaders have the right and responsibility to remove, edit, or reject
 47 | comments, commits, code, wiki edits, issues, and other contributions that are
 48 | not aligned to this Code of Conduct, and will communicate reasons for moderation
 49 | decisions when appropriate.
 50 | 
 51 | ## Scope
 52 | 
 53 | This Code of Conduct applies within all community spaces, and also applies when
 54 | an individual is officially representing the community in public spaces.
 55 | Examples of representing our community include using an official e-mail address,
 56 | posting via an official social media account, or acting as an appointed
 57 | representative at an online or offline event.
 58 | 
 59 | ## Enforcement
 60 | 
 61 | Instances of abusive, harassing, or otherwise unacceptable behavior may be
 62 | reported to the community leaders responsible for enforcement at codeofconduct@posit.co. 
 63 | All complaints will be reviewed and investigated promptly and fairly.
 64 | 
 65 | All community leaders are obligated to respect the privacy and security of the
 66 | reporter of any incident.
 67 | 
 68 | ## Enforcement Guidelines
 69 | 
 70 | Community leaders will follow these Community Impact Guidelines in determining
 71 | the consequences for any action they deem in violation of this Code of Conduct:
 72 | 
 73 | ### 1. Correction
 74 | 
 75 | **Community Impact**: Use of inappropriate language or other behavior deemed
 76 | unprofessional or unwelcome in the community.
 77 | 
 78 | **Consequence**: A private, written warning from community leaders, providing
 79 | clarity around the nature of the violation and an explanation of why the
 80 | behavior was inappropriate. A public apology may be requested.
 81 | 
 82 | ### 2. Warning
 83 | 
 84 | **Community Impact**: A violation through a single incident or series of
 85 | actions.
 86 | 
 87 | **Consequence**: A warning with consequences for continued behavior. No
 88 | interaction with the people involved, including unsolicited interaction with
 89 | those enforcing the Code of Conduct, for a specified period of time. This
 90 | includes avoiding interactions in community spaces as well as external channels
 91 | like social media. Violating these terms may lead to a temporary or permanent
 92 | ban.
 93 | 
 94 | ### 3. Temporary Ban
 95 | 
 96 | **Community Impact**: A serious violation of community standards, including
 97 | sustained inappropriate behavior.
 98 | 
 99 | **Consequence**: A temporary ban from any sort of interaction or public
100 | communication with the community for a specified period of time. No public or
101 | private interaction with the people involved, including unsolicited interaction
102 | with those enforcing the Code of Conduct, is allowed during this period.
103 | Violating these terms may lead to a permanent ban.
104 | 
105 | ### 4. Permanent Ban
106 | 
107 | **Community Impact**: Demonstrating a pattern of violation of community
108 | standards, including sustained inappropriate behavior, harassment of an
109 | individual, or aggression toward or disparagement of classes of individuals.
110 | 
111 | **Consequence**: A permanent ban from any sort of public interaction within the
112 | community.
113 | 
114 | ## Attribution
115 | 
116 | This Code of Conduct is adapted from the [Contributor Covenant][homepage],
117 | version 2.1, available at
118 | <https://www.contributor-covenant.org/version/2/1/code_of_conduct.html>.
119 | 
120 | Community Impact Guidelines were inspired by
121 | [Mozilla's code of conduct enforcement ladder][https://github.com/mozilla/inclusion].
122 | 
123 | For answers to common questions about this code of conduct, see the FAQ at
124 | <https://www.contributor-covenant.org/faq>. Translations are available at <https://www.contributor-covenant.org/translations>.
125 | 
126 | [homepage]: https://www.contributor-covenant.org
127 | 


--------------------------------------------------------------------------------
/inst/resources/html/paged.html:
--------------------------------------------------------------------------------
  1 | <!DOCTYPE html>
  2 | 
  3 | <html xmlns="http://www.w3.org/1999/xhtml"$if(lang)$ lang="$lang$" xml:lang="$lang$"$endif$>
  4 | 
  5 | <head>
  6 | 
  7 | <meta charset="utf-8">
  8 | <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  9 | <meta name="generator" content="pandoc" />
 10 | <meta name="viewport" content="width=device-width">
 11 | <meta property="og:title" content="$pagetitle$" />
 12 | $if(url)$<meta property="og:url" content="$url$" />$endif$
 13 | $if(cover-image)$<meta property="og:image" content="$url$$cover-image$" />$endif$
 14 | $if(description)$<meta property="og:description" content="$description$" />$endif$
 15 | 
 16 | $for(author-meta)$
 17 | <meta name="author" content="$author-meta$" />
 18 | $endfor$
 19 | 
 20 | $if(date-meta)$
 21 | <meta name="date" content="$date-meta$" />
 22 | $endif$
 23 | 
 24 | <meta name="description" content="$if(description)$$description$$else$$pagetitle$$endif$">
 25 | 
 26 | <script id="pandoc-meta" type="application/json">
 27 | $meta-json$
 28 | </script>
 29 | 
 30 | <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
 31 | 
 32 | $if(math)$
 33 | $if(mathjax)$
 34 | <!-- dynamically load mathjax for compatibility with self-contained -->
 35 | <script>
 36 | (function() {
 37 |   // Retrieve previous config object if defined
 38 |   window.PagedConfig = window.PagedConfig || {};
 39 |   let beforePaged = PagedConfig.before;
 40 |   window.PagedConfig.before = async () => {
 41 |     if (beforePaged) await beforePaged();
 42 |     return new Promise((resolve, reject) => {
 43 |       var script = document.createElement("script");
 44 |       script.type = "text/javascript";
 45 |       var src = `$mathjaxurl$` + "?config=TeX-MML-AM_CHTML";
 46 |       if (location.protocol !== "file:" && /^https?:/.test(src))
 47 |         src = src.replace(/^https?:/, '');
 48 |       script.src = src;
 49 |       window.MathJax = {
 50 |         AuthorInit: () => {
 51 |           MathJax.Hub.Register.StartupHook("Begin", () => {
 52 |             MathJax.Hub.Queue(resolve);
 53 |           });
 54 |         }
 55 |       };
 56 |       document.getElementsByTagName("head")[0].appendChild(script);
 57 |     });
 58 |   };
 59 | })();
 60 | </script>
 61 | $endif$
 62 | $endif$
 63 | 
 64 | $for(header-includes)$
 65 | $header-includes$
 66 | $endfor$
 67 | 
 68 | $if(highlightjs)$
 69 | <link rel="stylesheet"
 70 |       href="$highlightjs$/$if(highlightjs-theme)$$highlightjs-theme$$else$default$endif$.css"
 71 |       $if(html5)$$else$type="text/css" $endif$/>
 72 | <script src="$highlightjs$/highlight.js"></script>
 73 | $if(theme)$
 74 | <style type="text/css">
 75 |   pre:not([class]) {
 76 |     background-color: white;
 77 |   }
 78 | </style>
 79 | $endif$
 80 | <script type="text/javascript">
 81 | if (window.hljs && document.readyState && document.readyState === "complete") {
 82 |    window.setTimeout(function() {
 83 |       hljs.initHighlighting();
 84 |    }, 0);
 85 | }
 86 | </script>
 87 | $endif$
 88 | 
 89 | $if(highlighting-css)$
 90 | <style type="text/css">
 91 | $highlighting-css$
 92 | </style>
 93 | $if(theme)$
 94 | <style type="text/css">pre:not([class]) { background-color: white; }</style>
 95 | $endif$
 96 | $endif$
 97 | 
 98 | $if(abstract)$
 99 | <style type="text/css">
100 |   h3.abstract{
101 |     text-align: center;
102 |   }
103 |   div.abstract{
104 |     margin: auto;
105 |     width: 90%;
106 |   }
107 | </style>
108 | $endif$
109 | 
110 | $for(css)$
111 | <link rel="stylesheet" href="$css$" $if(html5)$$else$type="text/css" $endif$/>
112 | $endfor$
113 | 
114 | $if(theme)$
115 | <style type = "text/css">
116 | .main-container {
117 |   max-width: 940px;
118 |   margin-left: auto;
119 |   margin-right: auto;
120 | }
121 | code {
122 |   color: inherit;
123 |   background-color: rgba(0, 0, 0, 0.04);
124 | }
125 | img {
126 |   max-width:100%;
127 |   height: auto;
128 | }
129 | </style>
130 | $endif$
131 | </head>
132 | 
133 | <body>
134 | 
135 | <div class="running-h1-title"></div>
136 | 
137 | <div class="running-h2-title"></div>
138 | 
139 | $if(theme)$
140 | <div class="container-fluid main-container">
141 | $endif$
142 | 
143 | $for(include-before)$
144 | $include-before$
145 | $endfor$
146 | 
147 | <div class="front-page">
148 | $if(title)$
149 | <div id="$idprefix$header" class="title-page">
150 | $if(shorttitle)$
151 | <h1 class="shorttitle1" style="display: none;">$shorttitle$</h1>
152 | $endif$
153 | <h1 class="title">$title$</h1>
154 | $if(subtitle)$
155 | <h1 class="subtitle"><span>$subtitle$</span></h1>
156 | $endif$
157 | $for(author)$
158 | $if(author.name)$
159 | <h2 class="author">$author.name$</h2>
160 | $if(author.affiliation)$
161 | <address class="author-afil">
162 | $author.affiliation$<br/>$endif$
163 | $if(author.email)$
164 | <a class="author-email" href="mailto:#">$author.email$</a>
165 | </address>
166 | $endif$
167 | $else$
168 | <h2 class="author">$author$</h2>
169 | $endif$
170 | $endfor$
171 | $if(date)$
172 | <h2 class="date">$date$</h2>
173 | $endif$
174 | </div>
175 | $if(abstract)$
176 | <div class="abstract">
177 | <h3 class="abstract">$if(abstract-title)$$abstract-title$$else$Abstract$endif$</h3>
178 | $abstract$
179 | </div>
180 | $endif$
181 | $endif$
182 | </div>
183 | 
184 | <div class="front-matter-container">
185 | $if(toc)$
186 | <div id="$idprefix$TOC" class="level1 toc front-matter">
187 | $if(toc-title)$
188 | <h1 class="toc-title">$toc-title$</h1>
189 | $endif$
190 | $table-of-contents$
191 | </div>
192 | $endif$
193 | </div>
194 | 
195 | <div class="main">
196 | $body$
197 | </div>
198 | 
199 | $for(include-after)$
200 | $include-after$
201 | $endfor$
202 | 
203 | $if(theme)$
204 | </div>
205 | 
206 | <script>
207 | // add bootstrap table styles to pandoc tables
208 | $$(document).ready(function () {
209 |   $$('tr.header').parent('thead').parent('table').addClass('table table-condensed');
210 | });
211 | </script>
212 | $endif$
213 | 
214 | <script>
215 | // when the page is about to reload via servr, remember the scroll position
216 | document.addEventListener('servr:reload', function(e) {
217 |   sessionStorage.setItem('pagedown-scroll', window.scrollY);
218 | });
219 | </script>
220 | </body>
221 | </html>
222 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/html-resume/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
  1 | ---
  2 | title: "Lijia Yu's resume"
  3 | author: Lijia Yu
  4 | date: "`r Sys.Date()`"
  5 | output:
  6 |   pagedown::html_resume:
  7 |     # set it to true for a self-contained HTML page but it'll take longer to render
  8 |     self_contained: false
  9 | # uncomment this line to produce HTML and PDF in RStudio:
 10 | #knit: pagedown::chrome_print
 11 | ---
 12 | 
 13 | Aside
 14 | ================================================================================
 15 | 
 16 | 
 17 | ![Lijia Yu](https://avatars1.githubusercontent.com/u/895125?s=400&v=4){width=80%}
 18 | 
 19 | 
 20 | Contact Info {#contact}
 21 | --------------------------------------------------------------------------------
 22 | 
 23 | - <i class="fa fa-envelope"></i> lijia.yu@outlook.com
 24 | - <i class="fa fa-github"></i> [github.com/yulijia](https://github.com/yulijia)
 25 | - <i class="fa fa-phone"></i> +1 000-000-0000
 26 | - For more information, please contact me via email.
 27 | 
 28 | 
 29 | Skills {#skills}
 30 | --------------------------------------------------------------------------------
 31 | 
 32 | - Experienced in statistical analysis, statistical learning models, and optimization methods.
 33 | 
 34 | - Full experience with next generation sequencing data analysis.
 35 | 
 36 | - Highly skilled in R, Bash, Perl, Python, LaTeX
 37 | 
 38 | 
 39 | Disclaimer {#disclaimer}
 40 | --------------------------------------------------------------------------------
 41 | 
 42 | This resume was made with the R package [**pagedown**](https://github.com/rstudio/pagedown).
 43 | 
 44 | Last updated on `r Sys.Date()`.
 45 | 
 46 | 
 47 | 
 48 | Main
 49 | ================================================================================
 50 | 
 51 | Lijia Yu {#title}
 52 | --------------------------------------------------------------------------------
 53 | 
 54 | ### Currently searching for a PhD student position
 55 | 
 56 | Please note that this is a *real* resume, and I'm really looking for a PhD
 57 | student position at the moment. I made this resume because Yihui asked me
 58 | if I'd like to test the **pagedown** package with my resume. If you are
 59 | interested in my background and skills, please feel free to contact me.
 60 | 
 61 | 
 62 | Education {data-icon=graduation-cap data-concise=true}
 63 | --------------------------------------------------------------------------------
 64 | 
 65 | ### Beijing University of Chemical Technology
 66 | 
 67 | B.S. in Information and Computing Sciences
 68 | 
 69 | Beijing, China
 70 | 
 71 | 2010
 72 | 
 73 | Thesis: Dyadic wavelet and its application in edge detection
 74 | 
 75 | ### University of Chinese Academy of Sciences
 76 | 
 77 | M.S. in Bioinformatics
 78 | 
 79 | Beijing, China
 80 | 
 81 | 2014
 82 | 
 83 | Thesis: A multi-omics study for intra-individual divergence of the distributions between mRNA isoforms in mammals
 84 | 
 85 | 
 86 | Research Experience {data-icon=laptop}
 87 | --------------------------------------------------------------------------------
 88 | 
 89 | ### Graduate Research Assistant
 90 | 
 91 | Beijing Institute of Genomics, Chinese Academy of Sciences
 92 | 
 93 | Beijing, China
 94 | 
 95 | 2011 - 2014
 96 | 
 97 | - Performed computational biology research towards understanding regulation of alternative splicing in human and mouse transcriptome.
 98 | - Found EGFR pathway related mutations, aimed to understand the impacts of cancer mutations on EGFR signaling pathway.
 99 | 
100 | ### Bioinformatican
101 | 
102 | My Health Gene Technology Co., Ltd.
103 | 
104 | Beijing, China
105 | 
106 | 2015 - 2016
107 | 
108 | - Investigated how cancer cells spread to other parts of the body at the single cell level.
109 | 
110 | ### Visiting Scientist
111 | 
112 | University of Alabama at Birmingham
113 | 
114 | AL, USA
115 | 
116 | 2016 - 2018
117 | 
118 | - Investigated the role of mitochondria in development of cancer.
119 | - Investigated the evolution of genome architecture and its role in important evolutionary events.
120 | - Detected thrombotic thrombocytopenic purpura related mutations in mutiple patients' blood genome.
121 |   
122 | 
123 | Professional Experience {data-icon=suitcase}
124 | --------------------------------------------------------------------------------
125 | 
126 | ### Data Scientist, intern
127 | 
128 | SupStat Inc.
129 | 
130 | Beijing, China
131 | 
132 | 2014
133 | 
134 | ::: concise
135 | - Taught R language to beginners. 
136 | - Wrote Shiny app demos.
137 | - Converted statistical tutorials from SPSS to R language.
138 | :::
139 | 
140 | ### Bioinformatician
141 | 
142 | My Health Gene Technology Co., Ltd.
143 | 
144 | Beijing, China
145 | 
146 | 2015 - 2016
147 | 
148 | ::: concise
149 | - Analyzed whole-exome sequencing data. 
150 | - Wrote analysis pipelines of ChIP-seq, single cell DNA-seq and single cell RNA-seq.
151 | - Studied tumor metastasis and wrote research reports. 
152 | - Also did case studies to identify the genetic defect causing rare disease.
153 | :::
154 | 
155 | 
156 | Teaching Experience {data-icon=chalkboard-teacher}
157 | --------------------------------------------------------------------------------
158 | 
159 | ### Introduction to R Language for Beginners.
160 | 
161 | Instructor of R and Data Mining Training Courses at SupStat Inc.
162 | 
163 | Beijing, China
164 | 
165 | 2014
166 | 
167 | ### Computational Biology and Bioinformatics.
168 | 
169 | Teaching assistant of GBS CB2-201 courses at UAB
170 | 
171 | AL, USA
172 | 
173 | 2016 - 2017
174 | 
175 | 
176 | Selected Publications and Posters {data-icon=file}
177 | --------------------------------------------------------------------------------
178 | 
179 | ### Genetic and epigenetic signals are found predictive to the distribution of intra-individual divergence of alternative splicing.
180 | 
181 | Poster for 2013 International Conference of Genomics
182 | 
183 | Qingdao, China
184 | 
185 | 2014
186 | 
187 | **Yu L**, Chen B, Zhang Z.
188 | 
189 | ### ESCRT-0 complex modulates Rbf mutant cell survival by regulating Rhomboid endosomal trafficking and EGFR signaling.
190 | 
191 | J Cell Sci. 2016 May 15;129(10):2075-84.
192 | 
193 | N/A
194 | 
195 | 2016 
196 | 
197 | Sheng Z, **Yu L**, Zhang T, Pei X, Li X, Zhang Z and Du W. 
198 | 


--------------------------------------------------------------------------------
/inst/resources/css/crc.css:
--------------------------------------------------------------------------------
  1 | @import 'https://fonts.googleapis.com/css?family=Alegreya:400,400i,700,700i%7CAlegreya+SC%7CSource+Code+Pro:400,700';
  2 | 
  3 | :root {
  4 |   --background: lightsteelblue;
  5 | }
  6 | 
  7 | /* fonts */
  8 | body, blockquote {
  9 |   font-family: 'Alegreya', STKaiti, "华文楷体", serif;
 10 |   font-size: 11pt;
 11 |   font-weight: 400;
 12 | }
 13 | 
 14 | code {
 15 |   font-family: 'Source Code Pro', STKaiti, "华文楷体", monospace;
 16 |   font-weight: 400;
 17 | }
 18 | 
 19 | pre, code {
 20 |   font-size: 9pt;
 21 | }
 22 | 
 23 | .smallcaps {
 24 |   font-family: 'Alegreya SC', 'AlegreyaSC', STKaiti, "华文楷体", serif;
 25 |   font-variant: small-caps;
 26 | }
 27 | 
 28 | code .smallcaps, .abstract .smallcaps {
 29 |   font-family: inherit;
 30 | }
 31 | 
 32 | a.uri, a.email {
 33 |   font-family: 'Source Code Pro', monospace;
 34 |   font-size: 9pt;
 35 |   color: #2e3192;
 36 | }
 37 | 
 38 | a[href^="#"] {
 39 |   font-family: 'Alegreya';
 40 |   color: #ae2230;
 41 | }
 42 | 
 43 | /* main text content */
 44 | .level1 p {
 45 |   margin: 8pt 0;
 46 |   text-align: justify;
 47 |   line-height: 1.25;
 48 |   hyphens: auto; /* don't work for Chrome on Windows and Linux */
 49 | }
 50 | 
 51 | a {
 52 |   text-decoration: none;
 53 | }
 54 | 
 55 | .level1 sup, .level1 sub {
 56 |   line-height: 0.75;
 57 | }
 58 | 
 59 | /* margins content */
 60 | .pagedjs_margin {
 61 |   font-size: 9pt;
 62 | }
 63 | 
 64 | .running-h1-title, .running-h2-title {
 65 |   font-style: italic;
 66 | }
 67 | 
 68 | .pagedjs_margin-top .pagedjs_margin-content {
 69 |   margin-top: auto;
 70 |   margin-bottom: 7px;
 71 | }
 72 | 
 73 | /* first page */
 74 | .title {
 75 |   font-size: 20pt;
 76 |   font-style: italic;
 77 |   font-weight: bold;
 78 |   margin-top: 21pt;
 79 |   border-top: 1pt solid black;
 80 |   padding-top: 28pt;
 81 |   position: relative;
 82 | }
 83 | 
 84 | .title::before{
 85 |   display: block;
 86 |   position: absolute;
 87 |   top: 0;
 88 |   border-top: 4pt solid black;
 89 |   width: 27mm;
 90 |   content: '';
 91 | }
 92 | 
 93 | .date {
 94 |   display: none;
 95 | }
 96 | 
 97 | .author {
 98 |   position: absolute;
 99 |   top: 0;
100 |   left: 0;
101 |   margin:0;
102 |   font-size: 9pt;
103 |   font-weight: bold;
104 |   font-style: italic;
105 | }
106 | 
107 | /* abstract */
108 | .abstract {
109 |   text-align: center;
110 |   line-height: 1.8;
111 | }
112 | 
113 | h3.abstract {
114 |   display: none;
115 | }
116 | 
117 | /* table of contents, list of tables & list of figures */
118 | .toc * {
119 |   color: black !important;
120 |   white-space: nowrap;
121 | }
122 | 
123 | .toc > ul > li > a {
124 |   font-weight: bold;
125 | }
126 | 
127 | .toc > ul > li {
128 |   margin: 8pt 0;
129 | }
130 | 
131 | .toc > ul > li > a > .leaders::before {
132 |   content: '';
133 | }
134 | 
135 | .front-matter-ref + ul, .toc-section-unnumbered + ul {
136 |   display: none;
137 | }
138 | 
139 | .toc a, .lof a, .lot a {
140 |   padding-right: 0.7em;
141 | }
142 | 
143 | .toc a::after, .lof a::after, .lot a::after {
144 |   padding-left: 1em;
145 | }
146 | 
147 | .lot ul, .lof ul {
148 |   padding-left: 1.55em;
149 | }
150 | 
151 | .leaders::before {
152 |   word-spacing: 0.3em;
153 | }
154 | 
155 | .toc li li {
156 |   padding-left: 2em;
157 | }
158 | 
159 | .toc-section-number, .list-ref-number {
160 |   display: inline-block;
161 |   width: 2em;
162 | }
163 | 
164 | /* chapter headers */
165 | .level1 > h1 {
166 |   font-size: 16pt;
167 |   font-weight: normal;
168 |   font-style: italic;
169 |   white-space: pre-line;
170 |   position: relative;
171 |   line-height: 28pt;
172 |   margin-bottom: 54pt;
173 | }
174 | 
175 | .level1 > h1::after {
176 |   display: block;
177 |   content: " ";
178 |   width: 27mm;
179 |   height: 28pt;
180 |   position: absolute;
181 |   bottom: 0;
182 |   border-top: 4pt solid black;
183 |   border-bottom: 1pt solid black;
184 | }
185 | 
186 | h1 > .header-section-number::after {
187 |   content: "\000A";
188 | }
189 | 
190 | h1 > .header-section-number {
191 |   font-style: normal;
192 |   font-weight: bold;
193 |   font-size: 20pt;
194 |   width: 100%;
195 |   display: inline-block;
196 |   border-bottom: 1pt solid black;
197 |   line-height: 30pt;
198 |   position: relative;
199 |   top: -5pt;
200 | }
201 | 
202 | .toc > h1, .unnumbered > h1 {
203 |   font-weight: bold;
204 | }
205 | 
206 | .toc > h1::before, .unnumbered > h1::before {
207 |   display: block;
208 |   height: 32pt;
209 |   position: relative;
210 |   top: -5pt;
211 |   content: " ";
212 | }
213 | 
214 | /* section headers */
215 | .level2 > h2 {
216 |   font-size: 10pt;
217 |   margin-top: 40pt;
218 |   padding-top: 16pt;
219 |   border-top: 1pt solid black;
220 |   position: relative;
221 | }
222 | 
223 | .level2:first-child > h2 {
224 |   margin-top: 20pt;
225 | }
226 | 
227 | .level2 > h2::after{
228 |   display: block;
229 |   content: " ";
230 |   width: 27mm;
231 |   height: 27pt;
232 |   position: absolute;
233 |   bottom: 0;
234 |   border-top: 4pt solid black;
235 | }
236 | 
237 | .level2 .header-section-number {
238 |   margin-right: 10px;
239 | }
240 | 
241 | /* subsection headers */
242 | .level3 > h3 {
243 |   font-size: 10pt;
244 |   margin-top: 16pt;
245 | }
246 | 
247 | .level3 .header-section-number {
248 |   margin-right: 10px;
249 | }
250 | 
251 | /* footnotes */
252 | .footnote-break {
253 |   width: 2in;
254 | }
255 | 
256 | .footnote-area {
257 |   padding-left: 12pt;
258 | }
259 | 
260 | .footnote a.uri, .footnote a.email{
261 |   font-size: inherit;
262 | }
263 | 
264 | /* viewer */
265 | @media screen {
266 |   .pagedjs_page {
267 |      box-shadow: 0 4px 10px rgb(0, 0, 0, 0.6), inset 0 0 3px rgb(0, 0, 0, 0.6);
268 |   }
269 | }
270 | 
271 | @media screen and (min-width: 12.32in) {
272 |   .pagedjs_left_page {
273 |     box-shadow: -2px 4px 10px rgb(0, 0, 0, 0.6), inset -1px -1px 3px rgb(0, 0, 0, 0.6);
274 |   }
275 |   .pagedjs_right_page {
276 |     box-shadow: 2px 4px 10px rgb(0, 0, 0, 0.6), inset 1px -1px 3px rgb(0, 0, 0, 0.6);
277 |   }
278 |   .pagedjs_first_page {
279 |     box-shadow: 0 4px 10px rgb(0, 0, 0, 0.6), inset 0 0 3px rgb(0, 0, 0, 0.6);
280 |   }
281 |   .pagedjs_left_page:nth-last-of-type(1) {
282 |     box-shadow: 0 4px 10px rgb(0, 0, 0, 0.6), inset 0 0 3px rgb(0, 0, 0, 0.6);
283 |   }
284 | }
285 | 


--------------------------------------------------------------------------------
/inst/resources/lua/loft.lua:
--------------------------------------------------------------------------------
  1 | --[[
  2 |     A pandoc filter that generates Lists Of Figures and Tables (loft).
  3 |     This filter enables the lot and lof options as in LaTeX output formats.
  4 | 
  5 |     The user can also customise the titles with lot-title and lof-title:
  6 |     ---
  7 |     lof:
  8 |     lof-title: "Illustrations" # markdown styling is supported
  9 |     ---
 10 | --]]
 11 | 
 12 | -- REQUIREMENTS: Load shared lua function - see `shared.lua` in rmarkdown for more details.
 13 | --  * pandocAvailable()
 14 | --  * pandoc_type() function (backward compatible type() after 2.17 changes)
 15 | --  * print_debug()
 16 | dofile(os.getenv 'RMARKDOWN_LUA_SHARED')
 17 | 
 18 | --[[
 19 |   About the requirement:
 20 |   * PANDOC_VERSION -> 2.2.3
 21 | ]]
 22 | if (not pandocAvailable {2,2,3}) then
 23 |     io.stderr:write("[WARNING] (jss.lua) requires at least Pandoc 2.1. Lua Filter skipped.\n")
 24 |     return {}
 25 | end
 26 | 
 27 | -- START OF THE FILTER'S FUNCTIONS --
 28 | 
 29 | local options = {}     -- where we store pandoc Meta
 30 | local tablesList = {}  -- where we store the list of tables
 31 | local figuresList = {} -- where we store the list of figures
 32 | 
 33 | -- The following function stores pandoc Meta in the options local variable
 34 | local function getMeta(meta)
 35 |   options = meta
 36 |   -- If there is no given titles, use default titles
 37 |   if not options["lot-title"] then
 38 |     options["lot-title"] = pandoc.MetaInlines(pandoc.Str("List of Tables"))
 39 |   end
 40 |   if not options["lof-title"] then
 41 |     options["lof-title"] = pandoc.MetaInlines(pandoc.Str("List of Figures"))
 42 |   end
 43 |   return nil -- Do not modify Meta
 44 | end
 45 | 
 46 | -- Helpers function --
 47 | 
 48 | -- From a caption text, retrieve the reference and find it in reference list
 49 | local function refFromCaption(captionText, refList)
 50 |   local ref
 51 |   -- build figure reference from figure caption
 52 |   ref = "@ref" .. string.gsub(captionText, "#", "")
 53 |   ref = string.gsub(ref, "%)", ") ") -- add a space
 54 |   -- insert figure reference in figuresList
 55 |   table.insert(refList, {pandoc.Plain(pandoc.Str(ref))})
 56 | end
 57 | 
 58 | -- This function is called only for Div of class figure inserted by bookdown
 59 | local function getFigCaption(div)
 60 |   local listOfBlocks = div.content
 61 |   local found
 62 |   for i, block in ipairs(listOfBlocks) do
 63 |     if block.t == "RawBlock" then
 64 |       if block.text == '<p class="caption">' then
 65 |         found = i + 1
 66 |         break
 67 |       end
 68 |     end
 69 |   end
 70 |   if found then
 71 |     return pandoc.utils.stringify(div.content[found])
 72 |   else
 73 |     return nil
 74 |   end
 75 | end
 76 | 
 77 | -- Main AST processing functions
 78 | 
 79 | -- This function looks for caption in div of class figures. Usually raw HTML of this
 80 | -- structure is inserted by knitr::include_graphics() when `fig.cap` is provided
 81 | -- which identified as a Div in AST (bc of native_divs).
 82 | -- It builds and saves the items used by the list of figures.
 83 | local function addFigRef(div)
 84 | 
 85 |   local captionText
 86 |   local figref
 87 | 
 88 |   -- do not build the lof if not required
 89 |   if not options.lof then return nil end
 90 | 
 91 |   if div.classes:includes("figure") then
 92 |     captionText = getFigCaption(div)
 93 |     if not captionText then return nil end
 94 |     refFromCaption(captionText, figuresList)
 95 |   end
 96 |   return nil -- Do not modify Div
 97 | end
 98 | 
 99 | -- This function inspects the Images captions when Images are part of Figures
100 | -- (when Pandoc adds fig: in title meaning implicit_figures have identified it)
101 | -- When a bookdown id is found, it builds and saves the items used by
102 | -- the list of figures.
103 | local function addFigRef2(img)
104 | 
105 |   local captionText
106 |   local figref
107 | 
108 |   -- do not build the lof if not required
109 |   if not options.lof then return nil end
110 | 
111 |   -- Identified a figure
112 |   if img.title and img.title:sub(1,4) == "fig:" then
113 |     captionText = pandoc.utils.stringify(img.caption)
114 |     found = string.find(captionText, "%(#fig:.*%)")
115 |   if found then
116 |     refFromCaption(captionText, figuresList)
117 |   end
118 |   end
119 | end
120 | 
121 | -- This function inspects the tables captions.
122 | -- When a bookdown id is found, it builds and saves the items used by
123 | --  the list of tables.
124 | local function addTabRef(tab)
125 | 
126 |   local caption
127 |   local found
128 |   local tabref
129 | 
130 |   -- do not build the lot if not required
131 |   if not options.lot then return nil end
132 | 
133 |   caption = pandoc.utils.stringify(tab.caption)
134 |   -- test the presence of a bookdown table id
135 |   found = string.find(caption, "%(#tab:.*%)")
136 |   if found then
137 |     refFromCaption(caption, tablesList)
138 |   end
139 |   return nil -- Do not modify Table
140 | end
141 | 
142 | 
143 | -- This function appends the LOT/LOF to the document using custom titles
144 | -- if provided and is insert the new section into TOC unless opt-out
145 | local function appendLoft(doc)
146 | 
147 |   local lotHeader
148 |   local lofHeader
149 |   local lotClasses = {"lot", "unnumbered", "front-matter"}
150 |   local lofClasses = {"lof", "unnumbered", "front-matter"}
151 |   local idprefix = options.idprefix or ""
152 | 
153 |   if options.lof then
154 |     table.insert(doc.blocks, 1, pandoc.BulletList(figuresList))
155 |     if options["lof-unlisted"] then table.insert(lofClasses, "unlisted") end
156 |     lofHeader =
157 |       pandoc.Header(1,
158 |                     {table.unpack(options["lof-title"])},
159 |                     pandoc.Attr(idprefix .. "LOF", lofClasses, {})
160 |       )
161 |     table.insert(doc.blocks, 1, lofHeader)
162 |   end
163 | 
164 |   if options.lot then
165 |     table.insert(doc.blocks, 1, pandoc.BulletList(tablesList))
166 |     if options["lot-unlisted"] then table.insert(lotClasses, "unlisted") end
167 |     lotHeader =
168 |       pandoc.Header(1,
169 |                     {table.unpack(options["lot-title"])},
170 |                     pandoc.Attr(idprefix .. "LOT", lotClasses, {})
171 |       )
172 |     table.insert(doc.blocks, 1, lotHeader)
173 |   end
174 |   return pandoc.Pandoc(doc.blocks, doc.meta)
175 | end
176 | 
177 | -- Organize filters: Meta filter needs to run before others
178 | return {
179 |   {Meta = getMeta},
180 |   {Div = addFigRef, Image = addFigRef2, Table = addTabRef, Pandoc = appendLoft}
181 | }
182 | 


--------------------------------------------------------------------------------
/inst/resources/html/card.html:
--------------------------------------------------------------------------------
  1 | <!DOCTYPE html>
  2 | <html xmlns="http://www.w3.org/1999/xhtml"$if(lang)$ lang="$lang$" xml:lang="$lang$"$endif$>
  3 | <head>
  4 |   <meta charset="utf-8" />
  5 |   <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  6 |   <meta name="generator" content="pandoc" />
  7 |   <meta name="viewport" content="width=device-width, initial-scale=1" />
  8 | 
  9 |   <meta name="author" content="$author-meta$" />
 10 |   <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
 11 |   <link href="https://fonts.googleapis.com/css?family=$if(googlefonts)$$for(googlefonts)$$googlefonts$$sep$|$endfor$$else$Montserrat$endif$" rel="stylesheet" />
 12 |   <style>
 13 |   @page {
 14 |     margin: 0;
 15 |     size: $if(paperwidth)$$paperwidth$$else$$if(cardwidth)$$cardwidth$$else$2in$endif$$endif$ $if(paperheight)$$paperheight$$else$$if(cardheight)$$cardheight$$else$3in$endif$$endif$;
 16 |   }
 17 |   html, body {
 18 |     margin: 0;
 19 |     padding: 0;
 20 |     width: $if(paperwidth)$$paperwidth$$else$$if(cardwidth)$$cardwidth$$else$2in$endif$$endif$;
 21 |     height: $if(paperheight)$$paperheight$$else$$if(cardheight)$$cardheight$$else$3in$endif$$endif$;
 22 |   }
 23 |   .grid {
 24 |     display: grid;
 25 |     width: $if(paperwidth)$$paperwidth$$else$$if(cardwidth)$$cardwidth$$else$2in$endif$$endif$;
 26 |     height: $if(paperheight)$$paperheight$$else$$if(cardheight)$$cardheight$$else$3in$endif$$endif$;
 27 |     grid-template-columns: repeat($if(cols)$$cols$$else$1$endif$, calc(100% / $if(cols)$$cols$$else$1$endif$));
 28 |     grid-template-rows: repeat($if(rows)$$rows$$else$1$endif$, calc(100% / $if(rows)$$rows$$else$1$endif$));
 29 |     justify-items: center;
 30 |     align-items: center;
 31 |   }
 32 |   .wrapper {
 33 |     box-sizing: border-box;
 34 |     width: $if(cardwidth)$$cardwidth$$else$2in$endif$;
 35 |     height: $if(cardheight)$$cardheight$$else$3in$endif$;
 36 |     color: white;
 37 |     background-color: black;
 38 |   }
 39 |   @media screen {
 40 |     html, body {
 41 |       width: 100%;
 42 |       height: 100%;
 43 |     }
 44 |     .grid {
 45 |       margin: auto;
 46 |     }
 47 |   }
 48 |   </style>
 49 | </head>
 50 | 
 51 | <body>
 52 |   <template id="card-template">
 53 |   $if(logo)$<img class="logo" src="$logo$" alt="Logo" />$endif$
 54 |   <div class="me">
 55 |     <div class="name"><slot name="name"><span>$name$</span></slot></div>
 56 |     <div class="title"><slot name="title"><span>$title$</span></slot></div>
 57 |     <div class="coordinates">
 58 |       <p class="phone"><slot name="phone"><span>$phone$</span></slot></p>
 59 |       <p class="contact-email"><slot name="email"><span>$email$</span></slot></p>
 60 |       <p class="website"><slot name="url"><span>$url$</span></slot></p>
 61 |       <slot name="address"><div class="address">$address$</div></slot>
 62 |     </div>
 63 |   </div>
 64 |   <style>
 65 |   .logo {
 66 |     display: block;
 67 |     max-width: 75%;
 68 |     margin: auto;
 69 |     padding: .3in 0 0;
 70 |   }
 71 |   .me {
 72 |     font-family: $if(mainfont)$$for(mainfont)$'$mainfont$'$sep$, $endfor$, $else$$if(googlefonts)$$for(googlefonts)$'$googlefonts$'$sep$, $endfor$, $else$'Montserrat', $endif$$endif$sans-serif;
 73 |     font-size: 11px;
 74 |     letter-spacing: 0.8px;
 75 |     line-height: 1.7em;
 76 |     padding: 0.4cm;
 77 |   }
 78 |   .name {
 79 |     font-weight: bold;
 80 |   }
 81 |   .coordinates {
 82 |     color: #bbb;
 83 |     margin-top: 0.5cm;
 84 |     line-height: 1em;
 85 |   }
 86 |   </style>
 87 |   </template>
 88 | 
 89 |   $if(name)$
 90 |   <div class="wrapper" data-repeat="$if(repeat)$$repeat$$else$1$endif$">
 91 |   </div>
 92 |   $endif$
 93 | 
 94 |   $for(person)$
 95 |   <div class="wrapper" data-repeat="$if(person.repeat)$$person.repeat$$else$1$endif$">
 96 |     $if(person.name)$
 97 |     <span slot="name">$person.name$</span>
 98 |     $else$
 99 |     <span slot="name">$person$</span>
100 |     $endif$
101 |     $if(person.title)$<span slot="title">$person.title$</span>$endif$
102 |     $if(person.phone)$<span slot="phone">$person.phone$</span>$endif$
103 |     $if(person.email)$<span slot="email">$person.email$</span>$endif$
104 |     $if(person.url)$<span slot="url">$person.url$</span>$endif$
105 |     $if(person.address)$<div slot="address" class="address">$person.address$</div>$endif$
106 |   </div>
107 |   $endfor$
108 | 
109 |   $body$
110 | 
111 |   <script>
112 |     (() => {
113 |       // when a card is created using markdown, Pandoc embeds spans in paragraphs
114 |       // we need to move these spans outside paragraphs to be detected by the template
115 |       let paragraphs = document.querySelectorAll('.wrapper > p');
116 |       for (let paragraph of paragraphs) {
117 |         let wrapper = paragraph.parentElement;
118 |         for (let element of paragraph.childNodes) {
119 |           wrapper.appendChild(element);
120 |         }
121 |       }
122 | 
123 |       // repeat cards
124 |       const maxItemsPerGrid = $if(cols)$$cols$$else$1$endif$ * $if(rows)$$rows$$else$1$endif$;
125 |       let cards = document.querySelectorAll('.wrapper');
126 |       for (const card of cards) {
127 |         for (let i = 1; i < card.dataset.repeat; i++) {
128 |           document.body.insertBefore(card.cloneNode(true), card);
129 |         }
130 |       }
131 | 
132 |       // spread the cards in grids
133 |       cards = document.querySelectorAll('.wrapper');
134 |       let cardsArray = Array.from(cards);
135 |       while (cardsArray.length > 0) {
136 |         const numberOfItemsToInsertInGrid = Math.min(maxItemsPerGrid, cardsArray.length);
137 |         let grid = document.createElement('div');
138 |         grid.className = 'grid';
139 |         document.body.insertBefore(grid, cardsArray[0]);
140 |         for (let card of cardsArray.slice(0, numberOfItemsToInsertInGrid)) {
141 |           grid.appendChild(card);
142 |         }
143 |         cardsArray.splice(0, numberOfItemsToInsertInGrid);
144 |       }
145 | 
146 |       // build the shadow DOM for each card
147 |       let templateContent = document.getElementById('card-template').content;
148 |       let styles = document.querySelectorAll('body > style');
149 |       for (let card of cards) {
150 |         let shadowDOM = card.attachShadow({  mode: 'open' });
151 |         shadowDOM.appendChild(templateContent.cloneNode(true));
152 |         for (let style of styles) {
153 |           shadowDOM.innerHTML += '<style>' + style.innerHTML + '</style>';
154 |         }
155 |       }
156 |     })();
157 |   </script>
158 | </body>
159 | </html>
160 | 


--------------------------------------------------------------------------------
/inst/resources/css/jss.css:
--------------------------------------------------------------------------------
  1 | :root {
  2 |   --background: #2888b8;
  3 |   --pagedjs-width: 210mm;
  4 |   --color-paper: white;
  5 |   --screen-pages-spacing: 5mm;
  6 |   --header-width: 462px;
  7 |   --header-image-padding: 18px;
  8 | }
  9 | 
 10 | html {
 11 |   font-size: 14px;
 12 | }
 13 | 
 14 | /* article header */
 15 | .document-header {
 16 |   border-width: 4px 0;
 17 |   border-style: solid;
 18 |   width: var(--header-width);
 19 |   position: relative;
 20 |   margin-left: auto;
 21 |   margin-bottom: 110px;
 22 | }
 23 | .document-header::before {
 24 |   content: "";
 25 |   display: block;
 26 |   position: absolute;
 27 |   left: calc(var(--header-width) - var(--pagedjs-width) + var(--pagedjs-margin-left) + var(--pagedjs-margin-right));
 28 |   border-width: 4px 0;
 29 |   border-style: solid;
 30 |   border-color: transparent;
 31 |   top: -4px;
 32 |   height: 100%;
 33 |   width: calc(var(--pagedjs-width) - var(--pagedjs-margin-left) - var(--pagedjs-margin-right) - var(--header-width) - var(--header-image-padding));
 34 |   background-clip: border-box;
 35 |   background-image: url(https://www.jstatsoft.org/public/site/images/jstatsoft/jsslogo.jpg);
 36 |   background-size: contain;
 37 |   background-repeat: no-repeat;
 38 |   background-origin: border-box;
 39 | }
 40 | .journal-name {
 41 |   padding-top: 14px;
 42 |   padding-left: 20px;
 43 |   filter: invert(100%);
 44 |   height: 50px;
 45 | }
 46 | .header-meta {
 47 |   font-style: italic;
 48 |   margin: 6px 0;
 49 |   font-size: 14px;
 50 | }
 51 | .header-meta .doi {
 52 |   float: right;
 53 | }
 54 | 
 55 | /* title */
 56 | h1.title {
 57 |   text-align: center;
 58 | }
 59 | 
 60 | /* authors block */
 61 | .authors-container {
 62 |   display: flex;
 63 |   flex-direction: row-reverse;
 64 |   flex-wrap: wrap-reverse;
 65 |   justify-content: space-around;
 66 | }
 67 | .author-item {
 68 |   text-align: center;
 69 |   padding: 0 6px;
 70 |   flex: 1 1 33%;
 71 |   order: calc(-1 * var(--rank));
 72 | }
 73 | .author {
 74 |   font-weight: bold;
 75 | }
 76 | .author-affil {
 77 |   font-size: 14px;
 78 | }
 79 | 
 80 | /* abstract */
 81 | .abstract {
 82 |   border-width: 1px 0;
 83 |   border-style: solid;
 84 |   margin-top: 8px;
 85 |   margin-bottom: 50px;
 86 | }
 87 | h2.abstract-header {
 88 |   font-size: 14px;
 89 |   text-align: center;
 90 | }
 91 | .abstract-content {
 92 |   font-size: 13px;
 93 |   padding: 0 30px;
 94 |   text-align: justify;
 95 |   text-indent: 16px;
 96 | }
 97 | .keywords p {
 98 |   margin-bottom: 8px;
 99 |   font-size: 14px;
100 | }
101 | .keywords-heading {
102 |   font-style: italic;
103 | }
104 | 
105 | /* headers */
106 | main {
107 |   margin-top: 30px;
108 | }
109 | .level1 h1 {
110 |   text-align: center;
111 |   font-size: 20px;
112 |   margin-bottom: 16px;
113 | }
114 | .level1:not(:first-child) {
115 |   margin-top: 30px;
116 | }
117 | .level1:first-child h1 {
118 |   margin-top: 0;
119 | }
120 | .level1 {
121 |   counter-increment: section-level 1;
122 | }
123 | .level1 h1:before {
124 |   content: counter(section-level) ".";
125 |   padding-right: 6px;
126 | }
127 | .level2 h2 {
128 |   font-size: 16px;
129 | }
130 | .level2 {
131 |   counter-increment: subsection-level 1;
132 | }
133 | .level2 > h2:before {
134 |   content: counter(section-level) "." counter(subsection-level) ".";
135 |   padding-right: 6px;
136 | }
137 | 
138 | /* main content */
139 | .section {
140 |   widows: 3;
141 |   orphans: 3;
142 | }
143 | p {
144 |   widows: 3;
145 |   orphans: 3;
146 |   text-align: justify;
147 |   font-size: 14px;
148 |   line-height: 16px;
149 |   margin: 7px 0;
150 | }
151 | a {
152 |   text-decoration: none;
153 |   color: #000080;
154 | }
155 | .uri, .email, .doi, a[href^="http"] {
156 |   color: #800000;
157 | }
158 | pre, code {
159 |   white-space: pre;
160 | }
161 | .r-chunk-code {
162 |   font-style: italic;
163 | }
164 | .smallcaps {
165 |   font-variant: small-caps;
166 | }
167 | main img {
168 |   max-width: 100%;
169 |   max-height: calc(var(--pagedjs-height) - var(--pagedjs-margin-top) - var(--pagedjs-margin-bottom));
170 | }
171 | .figure {
172 |   break-inside: avoid;
173 | }
174 | .caption {
175 |   text-align: justify;
176 |   margin: 14px 0;
177 | }
178 | .footnote-break {
179 |   width: 40%;
180 |   border-color: black;
181 |   border-width: 0.5px;
182 | }
183 | sub, sup {
184 |   line-height: 0.75;
185 | }
186 | .table-container {
187 |   break-inside: avoid;
188 | }
189 | table {
190 |   margin: auto;
191 | }
192 | /* knitr::kables styling, see https://github.com/rstudio/pagedown/issues/214 */
193 | .kable_wrapper > tbody > tr > td {
194 |     vertical-align: top;
195 | }
196 | 
197 | /* bibliography */
198 | #references {
199 |   margin: 30px 0;
200 | }
201 | .references p {
202 |   text-indent: -12px;
203 |   padding: 7px 0 7px 12px;
204 | }
205 | 
206 | /* footer */
207 | .article-footer {
208 |   break-inside: avoid;
209 | }
210 | .article-footer:not(:first-child) {
211 |   margin-top: 50px;
212 | }
213 | .affil-header {
214 |   font-size: 16px;
215 |   margin: 8px 0;
216 | }
217 | .article-footer address {
218 |   font-style: normal;
219 | }
220 | .article-footer address p {
221 |   margin: 0;
222 | }
223 | .article-footer .author {
224 |   font-weight: normal;
225 | }
226 | .last-page-footer {
227 |   border-width: 1px 0;
228 |   border-style: solid;
229 |   position: absolute;
230 |   bottom: 0;
231 |   width: 100%;
232 |   font-size: 16px;
233 |   margin-bottom: 40px;
234 | }
235 | .jss-meta {
236 |   margin: 8px 0 4px 0;
237 | }
238 | .jss-meta .journal-name {
239 |   padding: 0;
240 |   margin: 0;
241 |   height: 17px;
242 | }
243 | .last-page-footer .uri {
244 |   float: right;
245 | }
246 | .footer-issue, .info-dates {
247 |   display: inline-block;
248 |   margin: 4px 0;
249 |   line-height: 18px;
250 | }
251 | .info-dates {
252 |   float: right;
253 |   text-align: right;
254 | }
255 | 
256 | /* viewer */
257 | @media screen {
258 |   body {
259 |     background-color: var(--background);
260 |     margin: var(--screen-pages-spacing) auto 0 auto;
261 |   }
262 |   .pagedjs_pages {
263 |     display: flex;
264 |     max-width: var(--pagedjs-width);
265 |     flex: 0;
266 |     flex-wrap: wrap;
267 |     margin: 0 auto;
268 |   }
269 |   .pagedjs_page {
270 |      background: var(--color-paper);
271 |      box-shadow: 0 4px 10px rgb(0, 0, 0, 0.6), inset 0 0 3px rgb(0, 0, 0, 0.6);
272 |      flex-shrink: 0;
273 |      flex-grow: 0;
274 |      margin: auto auto var(--screen-pages-spacing) auto;
275 |   }
276 | }
277 | 
278 | @media screen and (max-width:1180px)  {
279 |   body {
280 |     width: calc(var(--pagedjs-width) + 2 * var(--screen-pages-spacing));
281 |   }
282 | }
283 | 


--------------------------------------------------------------------------------
/inst/rmarkdown/templates/poster-jacobs/skeleton/skeleton.Rmd:
--------------------------------------------------------------------------------
  1 | ---
  2 | title: "Unnecessarily Complicated Research Title"
  3 | author: "John Smith^1^, James Smith^1,2^, and Jane Smith^3^"
  4 | institute: "1. Department and University One; 2. Department and University Two; 3. Department and University Three"
  5 | date: "2018-11-30"
  6 | references:
  7 |   - id: R-base
  8 |     author:
  9 |     - family: "R Core Team"
 10 |       given: ""
 11 |     title: 'R: A Language and Environment for Statistical Computing'
 12 |     issued:
 13 |       year: 2018
 14 |     URL: https://www.r-project.org
 15 |   - id: R-pagedown
 16 |     author:
 17 |     - family: Xie
 18 |       given: Yihui
 19 |     - family: Lesur
 20 |       given: Romain
 21 |     title: 'Paginate the HTML Output of R Markdown with CSS for Print'
 22 |     issued:
 23 |       year: 2018
 24 |     URL: https://github.com/rstudio/pagedown
 25 | output:
 26 |   pagedown::poster_jacobs:
 27 |     self_contained: false
 28 |     pandoc_args: --mathjax
 29 | ---
 30 | 
 31 | Objectives {.block}
 32 | ================================================================================
 33 | 
 34 | Lorem ipsum dolor sit amet, consectetur, nunc tellus pulvinar tortor, commodo eleifend risus arcu sed odio:
 35 | 
 36 | - Mollis dignissim, magna augue tincidunt dolor, interdum vestibulum urna
 37 | - Sed aliquet luctus lectus, eget aliquet leo ullamcorper consequat. Vivamus eros sem, iaculis ut euismod non, sollicitudin vel orci.
 38 | - Nascetur ridiculus mus.  
 39 | - Euismod non erat. Nam ultricies pellentesque nunc, ultrices volutpat nisl ultrices a.
 40 | - Euismod non erat. Nam ultricies pellentesque nunc, ultrices volutpat nisl ultrices a.
 41 | - Euismod non erat. Nam ultricies pellentesque nunc, ultrices volutpat nisl ultrices a.
 42 | - Euismod non erat. Nam ultricies pellentesque nunc, ultrices volutpat nisl ultrices a.
 43 | 
 44 | 
 45 | 
 46 | Introduction
 47 | ================================================================================
 48 | 
 49 | Lorem ipsum dolor **sit amet**, consectetur adipiscing elit. Donec ut volutpat elit. Sed laoreet accumsan mattis. Integer sapien tellus, auctor ac blandit eget, sollicitudin vitae lorem. Praesent dictum tempor pulvinar. Suspendisse potenti. Sed tincidunt varius ipsum, et porta nulla suscipit et. Etiam congue bibendum felis, ac dictum augue cursus a. **Donec** magna eros, iaculis sit amet placerat quis, laoreet id est.
 50 | 
 51 | ```{r, cars-plot, fig.width=6, fig.height=3, dev='svg', out.width='100%', fig.cap='Figure Caption.', echo=FALSE}
 52 | par(mar = c(4, 4, .1, .1), las = 1)
 53 | boxplot(
 54 |   Sepal.Length ~ Species, data = iris, horizontal = TRUE,
 55 |   col = c('limegreen', 'steelblue', 'orange'), notch = TRUE
 56 | )
 57 | ```
 58 | 
 59 | Test citations @R-base @R-pagedown. See Figure \@ref(fig:cars-plot).
 60 | 
 61 | 
 62 | 
 63 | 
 64 | Materials
 65 | ================================================================================
 66 | 
 67 | The following materials were required to complete the research:
 68 | 
 69 | 
 70 | - Curabitur pellentesque dignissim
 71 | - Eu facilisis est tempus quis
 72 | - Duis porta consequat lorem
 73 | - Eu facilisis est tempus quis
 74 | 
 75 | 
 76 | The materials were prepared according to the steps outlined below:
 77 | 
 78 | 1. Curabitur pellentesque dignissim
 79 | 1. Eu facilisis est tempus quis
 80 | 1. Duis porta consequat lorem
 81 | 1. Curabitur pellentesque dignissim
 82 | 
 83 | 
 84 | 
 85 | 
 86 | Methods
 87 | ================================================================================
 88 | 
 89 | Lorem ipsum dolor **sit amet**, consectetur adipiscing elit. Sed laoreet accumsan mattis. Integer sapien tellus, auctor ac blandit eget, sollicitudin vitae lorem. Praesent dictum tempor pulvinar. Suspendisse potenti. Sed tincidunt varius ipsum, et porta nulla suscipit et. Etiam congue bibendum felis, ac dictum augue cursus a. **Donec** magna eros, iaculis sit amet placerat quis, laoreet id est. In ut orci purus, interdum ornare nibh. Pellentesque pulvinar, nibh ac malesuada accumsan, urna nunc convallis tortor, ac vehicula nulla tellus eget nulla. Nullam lectus tortor, _consequat tempor hendrerit_ quis, vestibulum in diam. Maecenas sed diam augue.
 90 | 
 91 | Important Result {.block}
 92 | ================================================================================
 93 | 
 94 | Lorem ipsum dolor **sit amet**, consectetur adipiscing elit. Sed commodo molestie porta. Sed ultrices scelerisque sapien ac commodo. Donec ut volutpat elit.
 95 | 
 96 | 
 97 | 
 98 | Mathematical Section
 99 | ================================================================================
100 | 
101 | Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin. Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin.
102 |   
103 | \begin{equation}
104 | E = mc^{2}
105 | (\#eq:Einstein)
106 | \end{equation}
107 | 
108 | Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin. Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin.
109 | 
110 | \begin{equation}
111 | \cos^3 \theta =\frac{1}{4}\cos\theta+\frac{3}{4}\cos 3\theta
112 | (\#eq:refname)
113 | \end{equation}
114 | 
115 | Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin. Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin.
116 | 
117 | \begin{equation}
118 | \kappa =\frac{\xi}{E_{\mathrm{max}}}
119 | \end{equation}
120 | 
121 | Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin. Nam quis odio enim, in molestie libero. Vivamus cursus mi at nulla elementum sollicitudin.
122 | 
123 | 
124 | Results
125 | ================================================================================
126 | 
127 | ::: {.figure-example}
128 | Placeholder  
129 | ~~~~~~~  
130 | Image
131 | 
132 | Figure 2: Figure caption.
133 | :::
134 | 
135 | Nunc tempus venenatis facilisis. Curabitur suscipit consequat eros non porttitor. Sed a massa dolor, id ornare enim:
136 | 
137 | ```{r echo=FALSE}
138 | knitr::kable(iris[1:5, 1:4], caption = 'Table caption.')
139 | ```
140 | 
141 | 
142 | Conclusion
143 | ================================================================================
144 | 
145 | Nunc tempus venenatis facilisis. **Curabitur suscipit** consequat eros non porttitor. Sed a massa dolor, id ornare enim. Fusce quis massa dictum tortor **tincidunt mattis**. Donec quam est, lobortis quis pretium at, laoreet scelerisque lacus. Nam quis odio enim, in molestie libero. Vivamus cursus mi at _nulla elementum sollicitudin_.
146 | 
147 | Nunc tempus venenatis facilisis. **Curabitur suscipit** consequat eros non porttitor. Sed a massa dolor, id ornare enim. Fusce quis massa dictum tortor **tincidunt mattis**. Donec quam est, lobortis quis pretium at, laoreet scelerisque lacus. Nam quis odio enim, in molestie libero. Vivamus cursus mi at _nulla elementum sollicitudin_.
148 | 
149 | 
150 | 
151 | 
152 | References
153 | ================================================================================
154 | 
155 | <div id="refs"></div>
156 | 
157 | 
158 | 
159 | 
160 | Acknowledgements {data-color=red}
161 | ================================================================================
162 | 
163 | Nam mollis tristique neque eu luctus. Suspendisse rutrum congue nisi sed convallis. Aenean id neque dolor. Pellentesque habitant morbi tristique senectus et netus et malesuada fames ac turpis egestas.
164 | 
165 | ::: {.logo-example}
166 | Placeholder Logo
167 | 
168 | Placeholder Logo
169 | 
170 | Placeholder Logo
171 | :::
172 | 
173 | Nam mollis tristique neque eu luctus. Suspendisse rutrum congue nisi sed convallis. Aenean id neque dolor. Pellentesque habitant morbi tristique senectus et netus et malesuada fames ac turpis egestas.
174 | 
175 | 
176 | Contact Information {.block data-color=black data-border-color=orange data-background-color=white}
177 | ================================================================================
178 | 
179 | - Web: https://www.example.org/smithlab
180 | - Email: john@example.org
181 | - Phone: +1 (000) 111 1111
182 | 


--------------------------------------------------------------------------------
/inst/resources/html/thesis.html:
--------------------------------------------------------------------------------
  1 | <!DOCTYPE html>
  2 | 
  3 | <html xmlns="http://www.w3.org/1999/xhtml"$if(lang)$ lang="$lang$" xml:lang="$lang$"$endif$>
  4 | 
  5 | <head>
  6 | 
  7 | <meta charset="utf-8">
  8 | <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
  9 | <meta name="generator" content="pandoc" />
 10 | <meta name="viewport" content="width=device-width">
 11 | <meta property="og:title" content="$pagetitle$" />
 12 | $if(url)$<meta property="og:url" content="$url$" />$endif$
 13 | $if(cover-image)$<meta property="og:image" content="$url$$cover-image$" />$endif$
 14 | $if(description)$<meta property="og:description" content="$description$" />$endif$
 15 | 
 16 | $for(author-meta)$
 17 | <meta name="author" content="$author-meta$" />
 18 | $endfor$
 19 | 
 20 | $if(date-meta)$
 21 | <meta name="date" content="$date-meta$" />
 22 | $endif$
 23 | 
 24 | <meta name="description" content="$if(description)$$description$$else$$pagetitle$$endif$">
 25 | 
 26 | <script id="pandoc-meta" type="application/json">
 27 | $meta-json$
 28 | </script>
 29 | 
 30 | <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
 31 | 
 32 | $if(math)$
 33 | $if(mathjax)$
 34 | <!-- dynamically load mathjax for compatibility with self-contained -->
 35 | <script>
 36 | (function() {
 37 |   // Retrieve previous config object if defined
 38 |   window.PagedConfig = window.PagedConfig || {};
 39 |   let beforePaged = PagedConfig.before;
 40 |   window.PagedConfig.before = async () => {
 41 |     if (beforePaged) await beforePaged();
 42 |     return new Promise((resolve, reject) => {
 43 |       var script = document.createElement("script");
 44 |       script.type = "text/javascript";
 45 |       var src = `$mathjaxurl$` + "?config=TeX-MML-AM_CHTML";
 46 |       if (location.protocol !== "file:" && /^https?:/.test(src))
 47 |         src = src.replace(/^https?:/, '');
 48 |       script.src = src;
 49 |       window.MathJax = {
 50 |         AuthorInit: () => {
 51 |           MathJax.Hub.Register.StartupHook("Begin", () => {
 52 |             MathJax.Hub.Queue(resolve);
 53 |           });
 54 |         }
 55 |       };
 56 |       document.getElementsByTagName("head")[0].appendChild(script);
 57 |     });
 58 |   };
 59 | })();
 60 | </script>
 61 | $endif$
 62 | $endif$
 63 | 
 64 | $for(header-includes)$
 65 | $header-includes$
 66 | $endfor$
 67 | 
 68 | $if(highlightjs)$
 69 | <link rel="stylesheet"
 70 |       href="$highlightjs$/$if(highlightjs-theme)$$highlightjs-theme$$else$default$endif$.css"
 71 |       $if(html5)$$else$type="text/css" $endif$/>
 72 | <script src="$highlightjs$/highlight.js"></script>
 73 | $if(theme)$
 74 | <style type="text/css">
 75 |   pre:not([class]) {
 76 |     background-color: white;
 77 |   }
 78 | </style>
 79 | $endif$
 80 | <script type="text/javascript">
 81 | if (window.hljs && document.readyState && document.readyState === "complete") {
 82 |    window.setTimeout(function() {
 83 |       hljs.initHighlighting();
 84 |    }, 0);
 85 | }
 86 | </script>
 87 | $endif$
 88 | 
 89 | $if(highlighting-css)$
 90 | <style type="text/css">
 91 | $highlighting-css$
 92 | </style>
 93 | $if(theme)$
 94 | <style type="text/css">pre:not([class]) { background-color: white; }</style>
 95 | $endif$
 96 | $endif$
 97 | 
 98 | $for(css)$
 99 | <link rel="stylesheet" href="$css$" $if(html5)$$else$type="text/css" $endif$/>
100 | $endfor$
101 | 
102 | $if(theme)$
103 | <style type = "text/css">
104 | .main-container {
105 |   max-width: 940px;
106 |   margin-left: auto;
107 |   margin-right: auto;
108 | }
109 | code {
110 |   color: inherit;
111 |   background-color: rgba(0, 0, 0, 0.04);
112 | }
113 | img {
114 |   max-width:100%;
115 |   height: auto;
116 | }
117 | </style>
118 | $endif$
119 | </head>
120 | 
121 | <body>
122 | 
123 | <div class="running-h1-title"></div>
124 | 
125 | <div class="running-h2-title"></div>
126 | 
127 | $if(theme)$
128 | <div class="container-fluid main-container">
129 | $endif$
130 | 
131 | $for(include-before)$
132 | $include-before$
133 | $endfor$
134 | 
135 | <!--
136 | Title Page
137 | -->
138 | <div class="front-page">
139 | $if(title)$
140 | <div id="$idprefix$header" class="title-page">
141 | $if(shorttitle)$
142 | <br><br><h1 class="shorttitle1" style="display: none;">$shorttitle$</h1>
143 | $endif$
144 | <h1 class="title">$title$</h1>
145 | $if(subtitle)$
146 | <h1 class="subtitle"><span>$subtitle$</span></h1>
147 | $endif$
148 | $for(author)$
149 | <br><p class="titlep">by<p><br>
150 | $if(author.name)$
151 | <h2 class="author">$author.name$$if(author.edu)$, $author.edu$$endif$</h2>
152 | $endif$
153 | $endfor$
154 | </div>
155 | <br>
156 | <p class="department">Department of $department$</p>
157 | <br>
158 | <p class="titlep">Submitted in partial fulfillment of <br> the requirements for the degree of</p>
159 | <br>
160 | <h2 class="degree">$degree$</h2>
161 | <br>
162 | <p class="institute">Faculty of $faculty$, $institute$<br>$location$</p>
163 | <br>
164 | <p class="copyright">&#169; $for(date)$$date.year$$endfor$ $for(author)$$author.name$$endfor$</p>
165 | $endif$
166 | 
167 | <!--
168 | Bellow is the signature page
169 | if the user wants one the YAML
170 | should be "sign_page: true" -->
171 | 
172 | $if(sign_page)$
173 | <div class="signpage">
174 | <p class="titlep">This thesis entitled</p>
175 | $if(title)$
176 | <div id="$idprefix$header" class="title-page">
177 | $if(shorttitle)$
178 | <br><br><h1 class="shorttitle1" style="display: none;">$shorttitle$</h1>
179 | $endif$
180 | <p></p>
181 | <h1 class="title">$title$</h1>
182 | $for(author)$
183 | <br><p class="titlep">by<p><br>
184 | $if(author.name)$
185 | <h2 class="author">$author.name$$if(author.edu)$, $author.edu$$endif$</h2><br>
186 | $endif$
187 | $endfor$
188 | </div>
189 | <p class="titlep">Submitted in partial fulfillment of <br> the requirements for the degree of</p>
190 | <br>
191 | <h2 class="degree">$degree$</h2>
192 | <br>
193 | <p class="titlep">And has been duly approved by</p>
194 | <br><br>
195 | $for(committee)$
196 | <div class="signature">$committee.position$, $committee.prefix$. $committee.name$</div>
197 | $endfor$
198 | 
199 | <div class="signature">Date</div>
200 | $endif$
201 | </div>
202 | $endif$
203 | 
204 | <!-- Pre content section
205 | -Example, if user want a dedication page then they include "dedication: 'some text' in the YAML"
206 | -If you want other pages not found in this template simply add it to this section in the same way
207 | using the "$if(your_new_option)$ <your content> $endif$"
208 | -->
209 | $if(dedication)$
210 | <div class="dedication">
211 | <h1 class="dedication">$if(dedication-title)$$dedication-title$$else$Dedication$endif$</h1>
212 | <p class="dedication">$dedication$</p>
213 | </div>
214 | $endif$
215 | 
216 | 
217 | $if(abstract)$
218 | <div class="abstract">
219 | <h1 class="abstract">$if(abstract-title)$$abstract-title$$else$Abstract$endif$</h1>
220 | $abstract$
221 | </div>
222 | $endif$
223 | 
224 | $if(preface)$
225 | <div class="preface">
226 | <h1 class="preface">$if(preface-title)$$preface-title$$else$Preface$endif$</h1>
227 | $preface$
228 | </div>
229 | $endif$
230 | 
231 | $if(acknowledge)$
232 | <div class="acknowledge">
233 | <h1 class="acknowledge">$if(acknowledge-title)$$acknowledge-title$$else$Acknowledgement$endif$</h1>
234 | $acknowledge$
235 | </div>
236 | $endif$
237 | 
238 | </div>
239 | 
240 | <!-- This
241 | Container for the table of content, table of tables and table of figures etc.
242 | - See pagedown::html_paged for details on how to use.
243 | -->
244 | 
245 | <div class="front-matter-container">
246 | 
247 | $if(toc)$
248 | <div id="$idprefix$TOC" class="level1 toc front-matter">
249 | $if(toc-title)$
250 | <h1 class="toc-title">$toc-title$</h1>
251 | $table-of-contents$
252 | $else$
253 | $table-of-contents$
254 | $endif$
255 | </div>
256 | $endif$
257 | 
258 | </div>
259 | 
260 | $body$
261 | 
262 | $for(include-after)$
263 | $include-after$
264 | $endfor$
265 | 
266 | $if(theme)$
267 | </div>
268 | 
269 | <script>
270 | // add bootstrap table styles to pandoc tables
271 | $$(document).ready(function () {
272 |   $$('tr.header').parent('thead').parent('table').addClass('table table-condensed');
273 | });
274 | </script>
275 | $endif$
276 | 
277 | <script>
278 | // when the page is about to reload via servr, remember the scroll position
279 | document.addEventListener('servr:reload', function(e) {
280 |   sessionStorage.setItem('pagedown-scroll', window.scrollY);
281 | });
282 | </script>
283 | </body>
284 | </html>
285 | 


--------------------------------------------------------------------------------
/inst/resources/html/jss_paged.html:
--------------------------------------------------------------------------------
  1 | <!DOCTYPE html>
  2 | 
  3 | <html xmlns="http://www.w3.org/1999/xhtml" lang="$if(lang)$$lang$$else$en-US$endif$" xml:lang="$if(lang)$$lang$$else$en-US$endif$">
  4 | 
  5 | <head>
  6 | 
  7 | <meta charset="utf-8">
  8 | <meta http-equiv="Content-Type" content="text/html; charset=utf-8">
  9 | <meta property="dc:format" content="text/html">
 10 | <meta name="generator" content="pandoc">
 11 | <meta name="viewport" content="width=device-width">
 12 | <meta property="dc:type" content="Text">
 13 | <meta property="dc:language" content="$if(lang)$$lang$$else$en$endif$">
 14 | <meta property="dc:title og:title" content="$pagetitle$">
 15 | $if(url)$<meta property="dc:identifier og:url" content="$url$">$endif$
 16 | <meta property="og:image" content="https://www.jstatsoft.org/public/site/images/jstatsoft/jsslogo.jpg">
 17 | <link rel="icon" href="https://www.jstatsoft.org/public/journals/1/journalFavicon_en_US.gif">
 18 | <meta name="description" property="dc:description og:description schema:description" content="$if(description)$$description$$else$$pagetitle$$endif$">
 19 | $for(author-meta)$<meta name="author" content="$author-meta$">$endfor$
 20 | $if(date-meta)$<meta name="date" content="$date-meta$">$endif$
 21 | <meta name="keywords" property="dc:subject" content="$for(keywords-plain)$$keywords-plain$$sep$, $endfor$">
 22 | 
 23 | <title>$if(title-prefix)$$title-prefix$ - $endif$$pagetitle$</title>
 24 | 
 25 | <script>
 26 | window.PagedConfig = {
 27 |   before: async () => {
 28 |     // Expand the citations links
 29 |     let citations = document.querySelectorAll('.citation');
 30 |     for (let citation of citations) {
 31 |       let anchor = citation.querySelector('a');
 32 |       if (!anchor) continue;
 33 |       let span = document.createElement('span');
 34 |       span.innerHTML = anchor.innerHTML
 35 |       anchor.insertAdjacentElement('afterend', span)
 36 |       let href = anchor.getAttribute('href')
 37 |       anchor.remove();
 38 | 
 39 |       let newAnchor = document.createElement('a');
 40 |       newAnchor.setAttribute('href', href);
 41 |       citation.insertAdjacentElement('beforebegin', newAnchor);
 42 |       newAnchor.appendChild(citation);
 43 |     }
 44 | 
 45 |     // For the table captions, we would want to write this CSS rule:
 46 |     //     caption {caption-side: bottom-outside;}
 47 |     // However, the bottom-outside value is not standard and not implemented in Chrome.
 48 |     // So, we need to modify the DOM.
 49 |     let tables = document.querySelectorAll('table');
 50 |     for (let table of tables) {
 51 |       let caption = table.querySelector('caption');
 52 |       if (!caption) continue;
 53 |       let tableContainer = document.createElement('div');
 54 |       tableContainer.className = 'table-container';
 55 |       table.insertAdjacentElement('beforebegin', tableContainer);
 56 |       tableContainer.appendChild(table);
 57 |       let bookdownIdentifier = caption.querySelector('span[id^="tab\\:"]');
 58 |       if (!!bookdownIdentifier) {
 59 |         let tableId = bookdownIdentifier.id;
 60 |         bookdownIdentifier.removeAttribute('id');
 61 |         table.id = tableId;
 62 |       }
 63 |       let newCaption = document.createElement('p');
 64 |       newCaption.className = 'caption';
 65 |       newCaption.innerHTML = caption.innerHTML;
 66 |       caption.remove();
 67 |       tableContainer.appendChild(newCaption);
 68 |     }
 69 |   }
 70 | }
 71 | </script>
 72 | 
 73 | $if(math)$
 74 | $if(mathjax)$
 75 | <!-- dynamically load mathjax for compatibility with self-contained -->
 76 | <script>
 77 | (function() {
 78 |   let beforePaged = PagedConfig.before;
 79 | 
 80 |   window.PagedConfig = {
 81 |     before: async () => {
 82 |       await beforePaged();
 83 |       await new Promise((resolve, reject) => {
 84 |         var script = document.createElement("script");
 85 |         script.type = "text/javascript";
 86 |         var src = `$mathjaxurl$` + "?config=TeX-MML-AM_CHTML";
 87 |         if (location.protocol !== "file:" && /^https?:/.test(src))
 88 |           src = src.replace(/^https?:/, '');
 89 |         script.src = src;
 90 |         window.MathJax = {
 91 |           AuthorInit: () => {
 92 |             MathJax.Hub.Register.StartupHook("Begin", () => {
 93 |               MathJax.Hub.Queue(resolve);
 94 |             });
 95 |           }
 96 |         };
 97 |         document.getElementsByTagName("head")[0].appendChild(script);
 98 |       });
 99 |     }
100 |   };
101 | })();
102 | </script>
103 | $endif$
104 | $endif$
105 | 
106 | $for(header-includes)$
107 | $header-includes$
108 | $endfor$
109 | 
110 | $if(highlightjs)$
111 | <link rel="stylesheet"
112 |       href="$highlightjs$/$if(highlightjs-theme)$$highlightjs-theme$$else$default$endif$.css"
113 |       $if(html5)$$else$type="text/css" $endif$/>
114 | <script src="$highlightjs$/highlight.js"></script>
115 | <script type="text/javascript">
116 | if (window.hljs && document.readyState && document.readyState === "complete") {
117 |    window.setTimeout(function() {
118 |       hljs.initHighlighting();
119 |    }, 0);
120 | }
121 | </script>
122 | $endif$
123 | 
124 | $if(highlighting-css)$
125 | <style type="text/css">
126 | $highlighting-css$
127 | </style>
128 | $endif$
129 | 
130 | $for(css)$
131 | <link rel="stylesheet" href="$css$" $if(html5)$$else$type="text/css" $endif$/>
132 | $endfor$
133 | 
134 | </head>
135 | 
136 | <body>
137 |   <div style="display:none" aria-hidden="true">
138 |   \(
139 |     \let\pkg=\mathbf
140 |     \let\proglang=\textsf
141 |     \let\code=\texttt
142 |     \newcommand{\E}{\mathsf{E}}
143 |     \newcommand{\VAR}{\mathsf{VAR}}
144 |     \newcommand{\COV}{\mathsf{COV}}
145 |     \newcommand{\Prob}{\mathsf{P}}
146 |   \)
147 |   </div>
148 | 
149 | $for(include-before)$
150 | $include-before$
151 | $endfor$
152 | 
153 | <header class="document-header">
154 | <img class="journal-name" alt="Journal of Statistical Software" src="https://www.jstatsoft.org/public/journals/1/homeHeaderTitleImage_en_US.png">
155 | <p class="header-meta">
156 | $if(month)$
157 | $if(year)$
158 | $if(volume)$
159 | $if(issue)$
160 |   <span class="issue">$month$ $year$, Volume $volume$, Issue $issue$.</span>
161 | $endif$
162 | $endif$
163 | $endif$
164 | $endif$
165 | $if(doi)$
166 |   <a href="https://doi.org/$doi$" class="doi">doi: $doi$</a>
167 | $endif$
168 | </p>
169 | </header>
170 | 
171 | <article>
172 | 
173 | $if(title)$
174 | <header id="$idprefix$header" class="title-page">
175 | <h1 class="title">$title$</h1>
176 | <span class="shorttitle" style="display: none;" aria-hidden="true">$if(shorttitle)$$shorttitle$$else$$title$$endif$</span>
177 | $if(author)$
178 | <div class="authors-container" role="list">
179 | $for(author)$
180 | <p class="author-item" role="listitem" style="--rank: $author.rank$;">
181 | $if(author.data.name)$
182 | <span class="author">$author.data.name$</span>
183 | $if(author.data.affiliation)$
184 | <br><span class="author-affil">
185 | $author.data.affiliation$
186 | </span>
187 | $endif$
188 | $else$
189 | <span class="author">$author.data$</span>
190 | $endif$
191 | </p>
192 | $endfor$
193 | </div>
194 | $endif$
195 | </header>
196 | $endif$
197 | 
198 | <section class="abstract" property="dc:abstract">
199 | $if(abstract)$
200 | <h2 class="abstract-header">Abstract</h2>
201 | <div class="abstract-content">
202 | $abstract$
203 | </div>
204 | $endif$
205 | <section class="keywords" role="list" aria-labelledby="$idprefix$keywords-header">
206 | <p><span id="$idprefix$keywords-header" class="keywords-heading" aria-level="3" role="heading">Keywords</span>: $for(keywords)$<span role="listitem">$keywords$</span>$sep$, $endfor$.</p>
207 | </section>
208 | </section>
209 | 
210 | <main role="main">
211 | $body$
212 | </main>
213 | 
214 | <footer class="article-footer">
215 | $for(author)$
216 | $if(author.data.address)$
217 | <h3 class="affil-header">Affiliation:</h3>
218 | <address>
219 | <p class="author">$author.data.name$</p>
220 | <p class="author-affil">$author.data.affiliation$</p>
221 | <p class="author-address">$author.data.address$</p>
222 | $if(author.data.email)$<p>E-mail: $author.data.email$</p>$endif$
223 | $if(author.data.url)$<p>URL: $author.data.url$</p>$endif$
224 | </address>
225 | $endif$
226 | $endfor$
227 | <div class="last-page-footer">
228 | <p class="jss-meta">
229 | <img class="journal-name" alt="Journal of Statistical Software" src="https://www.jstatsoft.org/public/journals/1/homeHeaderTitleImage_en_US.png"> <a class="uri" href="https://www.jstatsoft.org/">http://www.jstatsoft.org/</a><br>
230 | published by the Foundation for Open Access Statistics <a class="uri" href="http://www.foastat.org/">http://www.foastat.org/</a>
231 | </p>
232 | <p class="footer-issue">
233 | $if(month)$
234 | $if(year)$
235 | $if(volume)$
236 | $if(issue)$
237 | $month$ $year$, Volume $volume$, Issue $issue$
238 | $endif$
239 | $endif$
240 | $endif$
241 | $endif$
242 | $if(doi)$
243 | <br><a href="https://doi.org/$doi$" class="doi">doi: $doi$</a>
244 | $endif$
245 | </p>
246 | <p class="info-dates">
247 | $if(submitdate)$<em>Submitted:</em> $submitdate$$endif$<br>
248 | $if(acceptdate)$<em>Accepted:</em> $acceptdate$$endif$
249 | </p>
250 | </div>
251 | </footer>
252 | </article>
253 | 
254 | $for(include-after)$
255 | $include-after$
256 | $endfor$
257 | 
258 | <script>
259 | // when the page is about to reload via servr, remember the scroll position
260 | document.addEventListener('servr:reload', function(e) {
261 |   sessionStorage.setItem('pagedown-scroll', window.scrollY);
262 | });
263 | </script>
264 | </body>
265 | </html>
266 | 


--------------------------------------------------------------------------------
/R/paged.R:
--------------------------------------------------------------------------------
  1 | #' Create a paged HTML document suitable for printing
  2 | #'
  3 | #' This is an output format based on \code{bookdown::html_document2} (which
  4 | #' means you can use those Markdown features added by \pkg{bookdown}). The HTML
  5 | #' output document is split into multiple pages via a JavaScript library
  6 | #' \pkg{paged.js}. These pages contain elements commonly seen in PDF documents,
  7 | #' such as page numbers and running headers.
  8 | #'
  9 | #' When a path or an url is passed to the \code{front_cover} or \code{back_cover}
 10 | #' argument, several CSS variables are created. They are named \code{--front-cover}
 11 | #' and \code{--back-cover} and can be used as value for the CSS property \code{background-image}.
 12 | #' For example, \code{background-image: var(--front-cover);}. When a vector of
 13 | #' paths or urls is used as a value for \code{front_cover} or \code{back_cover},
 14 | #' the CSS variables are suffixed with an index: \code{--front-cover-1},
 15 | #' \code{--front-cover-2}, etc.
 16 | #'
 17 | #' @param ... Arguments passed to
 18 | #'   \code{bookdown::\link[bookdown]{html_document2}}.
 19 | #' @param css A character vector of CSS and Sass file paths. If a path
 20 | #'   does not contain the \file{.css}, \file{.sass}, or \file{.scss} extension,
 21 | #'   it is assumed to be a built-in CSS file. For example, \code{default-fonts}
 22 | #'   means the file\code{pagedown:::pkg_resource('css', 'default-fonts.css')}.
 23 | #'   To see all built-in CSS files, run \code{pagedown:::list_css()}.
 24 | #' @param theme The Bootstrap theme. By default, Bootstrap is not used.
 25 | #' @param template The path to the Pandoc template to convert Markdown to HTML.
 26 | #' @param csl The path of the Citation Style Language (CSL) file used to format
 27 | #'   citations and references (see the \href{https://pandoc.org/MANUAL.html#citations}{Pandoc documentation}).
 28 | #' @param front_cover,back_cover Paths or urls to image files to be used
 29 | #'   as front or back covers. Theses images are available through CSS variables
 30 | #'   (see Details).
 31 | #' @references \url{https://pagedown.rbind.io}
 32 | #' @return An R Markdown output format.
 33 | #' @import stats utils
 34 | #' @export
 35 | html_paged = function(
 36 |   ..., css = c('default-fonts', 'default-page', 'default'), theme = NULL,
 37 |   template = pkg_resource('html', 'paged.html'), csl = NULL,
 38 |   front_cover = NULL, back_cover = NULL
 39 | ) {
 40 |   html_format(
 41 |     ..., css = css, theme = theme, template = template, .pagedjs = TRUE,
 42 |     .pandoc_args = c(
 43 |       lua_filters('uri-to-fn.lua', 'loft.lua', 'footnotes.lua'), # uri-to-fn.lua must come before footnotes.lua
 44 |       if (!is.null(csl)) c('--csl', csl),
 45 |       pandoc_chapter_name_args(),
 46 |       pandoc_covers_args(front_cover, back_cover)
 47 |     ),
 48 |     .dependencies = covers_dependencies(front_cover, back_cover)
 49 |   )
 50 | }
 51 | 
 52 | #' Create a letter in HTML
 53 | #'
 54 | #' This output format is similar to \code{html_paged}. The only differences are
 55 | #' in the default stylesheets and the default value of the \code{fig_caption}
 56 | #' parameter which is set to \code{FALSE}. See
 57 | #' \url{https://pagedown.rbind.io/html-letter/} for an example.
 58 | #' @param ...,css,fig_caption Arguments passed to \code{\link{html_paged}()}.
 59 | #' @return An R Markdown output format.
 60 | #' @export
 61 | html_letter = function(..., css = c('default', 'letter'), fig_caption = FALSE) {
 62 |   html_paged(..., css = css, fig_caption = fig_caption)
 63 | }
 64 | 
 65 | #' Create a book for Chapman & Hall/CRC
 66 | #'
 67 | #' This output format is similar to \code{\link{html_paged}}. The only
 68 | #' difference is in the default stylesheets.
 69 | #' @param ...,css Arguments passed to \code{\link{html_paged}()}.
 70 | #' @return An R Markdown output format.
 71 | #' @export
 72 | book_crc = function(..., css = c('crc-page', 'default-page', 'default', 'crc')) {
 73 |   # see https://github.com/rstudio/pagedown/issues/41 that explains why we need a specific crc-page.css file
 74 |   html_paged(..., css = css)
 75 | }
 76 | 
 77 | #' Create an article for the Journal of Statistical Software
 78 | #'
 79 | #' This output format is similar to \code{\link{html_paged}}.
 80 | #' @param ...,css,template,csl,highlight,pandoc_args Arguments passed to \code{\link{html_paged}()}.
 81 | #' @return An R Markdown output format.
 82 | #' @export
 83 | jss_paged = function(
 84 |   ..., css = c('jss-fonts', 'jss-page', 'jss'),
 85 |   template = pkg_resource('html', 'jss_paged.html'),
 86 |   csl = pkg_resource('csl', 'journal-of-statistical-software.csl'),
 87 |   highlight = NULL, pandoc_args = NULL
 88 | ) {
 89 |   jss_format = html_paged(
 90 |     ..., template = template, css = css,
 91 |     csl = csl, highlight = highlight,
 92 |     number_sections = FALSE,
 93 |     pandoc_args = c(
 94 |       lua_filters('jss.lua'),
 95 |       '--metadata', 'link-citations=true',
 96 |       pandoc_args
 97 |     )
 98 |   )
 99 | 
100 |   opts_jss = list(
101 |     prompt = TRUE, comment = NA, R.options = list(prompt = 'R> ', continue = 'R+ '),
102 |     fig.align = 'center', fig.width = 4.9, fig.height = 3.675,
103 |     class.source = 'r-chunk-code'
104 |   )
105 |   for (i in names(opts_jss)) {
106 |     jss_format$knitr$opts_chunk[[i]] = opts_jss[[i]]
107 |   }
108 | 
109 |   jss_format
110 | }
111 | 
112 | #' Create a paged HTML thesis document suitable for printing
113 | #'
114 | #' This output format is similar to \code{\link{html_paged}}. The only
115 | #' difference is in the default stylesheets and Pandoc template. See
116 | #' \url{https://pagedown.rbind.io/thesis-paged/} for an example.
117 | #' @param ...,css,template Arguments passed to \code{\link{html_paged}()}.
118 | #' @return An R Markdown output format.
119 | #' @export
120 | thesis_paged = function(
121 |   ..., css = c('thesis'), template = pkg_resource('html', 'thesis.html')
122 | ) {
123 |   html_paged(..., css = css, template = template)
124 | }
125 | 
126 | pagedown_dependency = function(css = NULL, js = FALSE, .test = FALSE) {
127 |   paged = if (.test) 'js/paged-latest.js' else c('js/paged.js', 'js/hooks.js')
128 |   list(htmltools::htmlDependency(
129 |     'paged', packageVersion('pagedown'), src = pkg_resource(),
130 |     script = if (js) c('js/config.js', paged),
131 |     stylesheet = file.path('css', css), all_files = .test
132 |   ))
133 | }
134 | 
135 | html_format = function(
136 |   ..., self_contained = TRUE, anchor_sections = FALSE, mathjax = 'default', css, template, pandoc_args = NULL,
137 |   .dependencies = NULL, .pagedjs = FALSE, .pandoc_args = NULL, .test = FALSE
138 | ) {
139 |   if (!identical(mathjax, 'local')) {
140 |     if (identical(mathjax, 'default'))
141 |       mathjax = rmarkdown:::default_mathjax()
142 | 
143 |     # workaround the rmarkdown warning when self_contained is TRUE
144 |     # see https://github.com/rstudio/pagedown/issues/128#issuecomment-518371613
145 |     if (isTRUE(self_contained) && !is.null(mathjax)) {
146 |       pandoc_args = c(pandoc_args, paste0('--mathjax=', mathjax))
147 |       mathjax = NULL # let rmarkdown believe that we do not use MathJax
148 |     }
149 |   }
150 | 
151 |   css2 = grep('[.](?:sa|sc|c)ss$', css, value = TRUE, invert = TRUE)
152 |   css  = setdiff(css, css2)
153 |   check_css(css2)
154 | 
155 |   pandoc_args = c(
156 |     .pandoc_args,
157 |     pandoc_args,
158 |     # use the pagebreak pandoc filter provided by rmarkdown 1.16:
159 |     if (isTRUE(.pagedjs)) pandoc_metadata_arg('newpage_html_class', 'page-break-after')
160 |   )
161 | 
162 |   html_document2 = function(..., extra_dependencies = list()) {
163 |     bookdown::html_document2(..., extra_dependencies = c(
164 |       extra_dependencies, .dependencies,
165 |       pagedown_dependency(xfun::with_ext(css2, '.css'), .pagedjs, .test)
166 |     ))
167 |   }
168 | 
169 |   fmt = html_document2(
170 |     ..., self_contained = self_contained, anchor_sections = anchor_sections, mathjax = mathjax, css = css,
171 |     template = template, pandoc_args = pandoc_args
172 |   )
173 | 
174 | 
175 |   if (isTRUE(.pagedjs)) {
176 |     # shadow DOM needs to be deactivated (until https://gitlab.coko.foundation/pagedjs/pagedjs/-/issues/148 is solved)
177 |     # e.g this is required for the flextable package (see https://github.com/rstudio/pagedown/issues/216) so we need to pass
178 |     # information about paged.js being used. 
179 |     fmt$knitr$opts_knit[['is.paged.js']] = TRUE
180 | 
181 |     # Keeping this for flextable < 0.8.6
182 |     fmt$knitr$opts_chunk[['ft.shadow']] = FALSE
183 |   }
184 | 
185 |   fmt
186 | }
187 | 
188 | chapter_name = function() {
189 |   config = bookdown:::load_config()
190 |   chapter_name = config[['chapter_name']] %n% bookdown:::ui_language('chapter_name')
191 |   if (is.null(chapter_name) || identical(chapter_name, '')) return()
192 |   if (!is.character(chapter_name)) stop(
193 |     'chapter_name in _bookdown.yml must be a character string'
194 |   )
195 |   if (length(chapter_name) > 2) stop('chapter_name must be of length 1 or 2')
196 |   chapter_name
197 | }
198 | 
199 | pandoc_metadata_arg = function(name, value) {
200 |   if (!missing(value) && is.character(value)) {
201 |     value = deparse(value)
202 |   }
203 |   c('--metadata', if (missing(value)) name else paste0(name, '=', value))
204 | }
205 | 
206 | pandoc_chapter_name_args = function() {
207 |   unlist(lapply(chapter_name(), pandoc_metadata_arg, name = 'chapter_name'))
208 | }
209 | 
210 | pandoc_covers_args = function(front_cover, back_cover) {
211 |   build_links = function(name, img) {
212 |     if (length(img) == 0) return()
213 |     name = paste(name, seq_along(img), sep = '-')
214 |     links = paste0('<link id="', name,'-pagedown-attachment" rel="attachment" href="', img, '" />')
215 |     links[!file.exists(img)]
216 |   }
217 |   links = c(build_links('front-cover', front_cover), build_links('back-cover', back_cover))
218 |   if (length(links)) {
219 |     writeLines(links, f <- tempfile(fileext = ".html"))
220 |     rmarkdown::includes_to_pandoc_args(rmarkdown::includes(f))
221 |   }
222 | }
223 | 
224 | covers_dependencies = function(front_cover, back_cover) {
225 |   html_dep = function(name, img) {
226 |     htmltools::htmlDependency(
227 |       name, packageVersion('pagedown'), dirname(path.expand(img)),
228 |       attachment = c(pagedown = basename(img)), all_files = FALSE
229 |     )
230 |   }
231 | 
232 |   build_deps = function(name, img) {
233 |     if (length(img) == 0) return(list())
234 |     name = paste(name, seq_along(img), sep = '-')
235 |     name = name[file.exists(img)]
236 |     img = img[file.exists(img)]
237 |     mapply(name, img, FUN = html_dep, USE.NAMES = FALSE, SIMPLIFY = FALSE)
238 |   }
239 | 
240 |   c(build_deps('front-cover', front_cover), build_deps('back-cover', back_cover))
241 | }
242 | 


--------------------------------------------------------------------------------
/inst/resources/css/resume.css:
--------------------------------------------------------------------------------
  1 | @page{
  2 |   size: letter portrait;
  3 |   margin: 1in 0.5in 1in 0.25in;
  4 | }
  5 | 
  6 | *{
  7 |   box-sizing: border-box;
  8 | }
  9 | 
 10 | :root{
 11 |   --page-width: 8.5in;
 12 |   --margin-right: 0.5in;
 13 |   --margin-left: 0.25in;
 14 |   --content-width: calc(var(--page-width) - var(--margin-right) - var(--margin-left));
 15 |   --root-font-size: 12pt;
 16 |   --sidebar-width: 15rem;
 17 |   --sidebar-background-color: #f2f2f2;
 18 |   --main-width: calc(var(--content-width) - var(--sidebar-width));
 19 |   --decorator-horizontal-margin: 0.2in;
 20 | 
 21 |   --sidebar-horizontal-padding: 0.2in;
 22 | 
 23 |   /* XXX: using px for very good precision control */
 24 |   --decorator-outer-offset-top: 10px;
 25 |   --decorator-outer-offset-left: -5.5px;
 26 |   --decorator-border-width: 1px;
 27 |   --decorator-outer-dim: 9px;
 28 |   --decorator-border: 1px solid #ccc;
 29 | 
 30 |   --row-blocks-padding-top: 0.5rem;
 31 |   --date-block-width: 0.7in;
 32 | 
 33 |   --main-blocks-title-icon-offset-left: calc(-17pt - 0.25 * var(--root-font-size));
 34 | 
 35 |   --viewer-background-color: #dcdcdc;
 36 |   --viewer-pages-spacing: 12px;
 37 |   --viewer-shadow-color: #313131;
 38 | }
 39 | 
 40 | .pagedjs_page {
 41 |   --content-area-height: calc(var(--pagedjs-height) - var(--pagedjs-margin-top) - var(--pagedjs-margin-bottom));
 42 |   --sidebar-background-width: calc(var(--pagedjs-margin-right) + var(--sidebar-width));
 43 | }
 44 | 
 45 | @page{
 46 |   background: linear-gradient(to left, var(--sidebar-background-color), var(--sidebar-background-color) var(--sidebar-background-width), white var(--sidebar-background-width));
 47 | }
 48 | 
 49 | html {
 50 |   font-size: var(--root-font-size);
 51 | }
 52 | 
 53 | body{
 54 |   width: var(--content-width);
 55 |   font-family: "Open Sans", sans-serif;
 56 |   font-weight: 300;
 57 |   line-height: 1.3;
 58 |   color: #444;
 59 |   hyphens: auto;
 60 | }
 61 | 
 62 | h1, h2, h3{
 63 |   margin: 0;
 64 |   color: #000;
 65 | }
 66 | 
 67 | #main > h1, #aside > h1, #disclaimer > h2 {
 68 |   display: none;
 69 | }
 70 | 
 71 | li{
 72 |   list-style-type: none;
 73 | }
 74 | 
 75 | a{
 76 |   text-decoration: none;
 77 | }
 78 | 
 79 | img{
 80 |   max-width: 100%;
 81 | }
 82 | 
 83 | #main{
 84 |   width: var(--main-width);
 85 |   padding: 0 0.25in 0 0.25in;
 86 |   font-size: 0.7rem;
 87 |   float: left;
 88 | }
 89 | 
 90 | #aside{
 91 |   position: relative; /* for disclaimer */
 92 |   height: var(--content-area-height);
 93 | }
 94 | 
 95 | .aside{
 96 |   width: var(--sidebar-width);
 97 |   padding: 0.6in var(--sidebar-horizontal-padding);
 98 |   font-size: 0.8rem;
 99 |   float: right;
100 |   position: absolute;
101 |   right: 0;
102 | }
103 | 
104 | /* main */
105 | 
106 | /** big title **/
107 | h1, h2{
108 |   text-transform: uppercase;
109 | }
110 | 
111 | #title{
112 |   position: relative;
113 |   left: 0.55in;
114 |   margin: auto 0.55in 0.3in auto;
115 |   line-height: 1.2;
116 | }
117 | 
118 | #title h1{
119 |   font-weight: 300;
120 |   font-size: 1.8rem;
121 |   line-height: 1.5;
122 | }
123 | 
124 | #title h3{
125 |   font-size: 0.8rem;
126 | }
127 | 
128 | 
129 | /*** categorial blocks ***/
130 | 
131 | .main-block{
132 |   margin-top: 0.1in;
133 | }
134 | 
135 | #main h2{
136 |   position: relative;
137 |   top: var(--row-blocks-padding-top);
138 |   /* XXX: 0.5px for aligning fx printing */
139 |   left: calc((var(--date-block-width) + var(--decorator-horizontal-margin)));
140 |   font-weight: 400;
141 |   font-size: 1.1rem;
142 |   color: #555;
143 | }
144 | 
145 | #main h2 > i{
146 |   /* use absolute position to prevent icon's width from misaligning title */
147 |   /* assigning a fixed width here is no better due to needing to align decorator
148 |      line too */
149 |   position: absolute;
150 |   left: var(--main-blocks-title-icon-offset-left);
151 |   z-index: 1; /* over decorator line */
152 |   color: #444;
153 | }
154 | 
155 | #main h2::after{ /* extends the decorator line */
156 |   height: calc(var(--row-blocks-padding-top) * 2);
157 |   position: relative;
158 |   top: calc(-1 * var(--row-blocks-padding-top));
159 |   /* XXX: 0.5px for aligning fx printing */
160 |   left: calc(-1 * var(--decorator-horizontal-margin));
161 |   display: block;
162 |   border-left: var(--decorator-border);
163 |   z-index: 0;
164 |   line-height: 0;
165 |   font-size: 0;
166 |   content: ' ';
167 | }
168 | 
169 | /**** minor tweaks on the icon fonts ****/
170 | #main h2 > .fa-graduation-cap{
171 |   left: calc(var(--main-blocks-title-icon-offset-left) - 2pt);
172 |   top: 2pt;
173 | }
174 | 
175 | #main h2 > .fa-suitcase{
176 |   top: 1pt;
177 | }
178 | 
179 | #main h2 > .fa-folder-open{
180 |   top: 1.5pt;
181 | }
182 | 
183 | /**** individual row blocks (date - decorator - details) ****/
184 | 
185 | .blocks{
186 |   display: flex;
187 |   flex-flow: row nowrap;
188 | }
189 | 
190 | .blocks > div{
191 |   padding-top: var(--row-blocks-padding-top);
192 | }
193 | 
194 | .date{
195 |   flex: 0 0 var(--date-block-width);
196 |   padding-top: calc(var(--row-blocks-padding-top) + 0.25rem) !important;
197 |   padding-right: var(--decorator-horizontal-margin);
198 |   font-size: 0.7rem;
199 |   text-align: right;
200 |   line-height: 1;
201 |   max-width: var(--date-block-width);
202 | }
203 | 
204 | .date span{
205 |   display: block;
206 |   text-align: center;
207 | }
208 | 
209 | .date span:nth-child(2)::before{
210 |   position: relative;
211 |   top: 0.1rem;
212 |   right: 0;
213 |   display: block;
214 |   height: 1rem;
215 |   content: '|';
216 | }
217 | 
218 | .decorator{
219 |   flex: 0 0 0;
220 |   position: relative;
221 |   width: 2pt;
222 |   min-height: 100%;
223 |   border-left: var(--decorator-border);
224 | }
225 | 
226 | /*
227 |  * XXX: Use two filled circles to achieve the circle-with-white-border effect.
228 |  * The normal technique of only using one pseudo element and
229 |  * border: 1px solid white; style makes firefox erroneously either:
230 |  * 1) overflows the grayshade background (if no background-clip is set), or
231 |  * 2) shows decorator line which should've been masked by the white border
232 |  *
233 |  */
234 | 
235 | .decorator::before{
236 |   position: absolute;
237 |   top: var(--decorator-outer-offset-top);
238 |   left: var(--decorator-outer-offset-left);
239 |   content: ' ';
240 |   display: block;
241 |   width: var(--decorator-outer-dim);
242 |   height: var(--decorator-outer-dim);
243 |   border-radius: calc(var(--decorator-outer-dim) / 2);
244 |   background-color: #fff;
245 | }
246 | 
247 | .decorator::after{
248 |   position: absolute;
249 |   top: calc(var(--decorator-outer-offset-top) + var(--decorator-border-width));
250 |   left: calc(var(--decorator-outer-offset-left) + var(--decorator-border-width));
251 |   content: ' ';
252 |   display: block;
253 |   width: calc(var(--decorator-outer-dim) - (var(--decorator-border-width) * 2));
254 |   height: calc(var(--decorator-outer-dim) - (var(--decorator-border-width) * 2));
255 |   border-radius: calc((var(--decorator-outer-dim) - (var(--decorator-border-width) * 2)) / 2);
256 |   background-color: #555;
257 | }
258 | 
259 | .blocks:last-child .decorator{ /* slightly shortens it */
260 |   margin-bottom: 0.25in;
261 | }
262 | 
263 | /***** fine-tunes on the details block where the real juice is *****/
264 | 
265 | .details{
266 |   flex: 1 0 0;
267 |   padding-left: var(--decorator-horizontal-margin);
268 |   padding-top: calc(var(--row-blocks-padding-top) - 0.05rem) !important; /* not sure why but this is needed for better alignment */
269 | }
270 | 
271 | .details header{
272 |   color: #000;
273 | }
274 | 
275 | .details h3{
276 |   font-size: 0.8rem;
277 | }
278 | 
279 | .main-block:not(.concise) .details div{
280 |   margin: 0.18in 0 0.1in 0;
281 | }
282 | 
283 | .main-block:not(.concise) .details div:empty {
284 |   margin: 0;
285 | }
286 | 
287 | .main-block:not(.concise) .blocks:last-child .details div{
288 |   margin-bottom: 0;
289 | }
290 | 
291 | .main-block.concise .details div:not(.concise){
292 |   /* use padding to work around the fact that margin doesn't affect floated
293 |      neighboring elements */
294 |   padding: 0.05in 0 0.07in 0;
295 | }
296 | 
297 | .details .place{
298 |   float: left;
299 |   font-size: 0.75rem;
300 | }
301 | 
302 | .details .location{
303 |   float: right;
304 | }
305 | 
306 | .details div{
307 |   clear: both;
308 | }
309 | 
310 | /***** fine-tunes on the lists... *****/
311 | 
312 | #main ul{
313 |   padding-left: 0.07in;
314 |   margin: 0.08in 0;
315 | }
316 | 
317 | #main li{
318 |   margin: 0 0 0.025in 0;
319 | }
320 | 
321 | /****** customize list symbol style ******/
322 | #main li::before{
323 |   position: relative;
324 |   margin-left: -4.25pt;
325 |   content: '• ';
326 | }
327 | 
328 | .aside li::before {
329 |   content: none;
330 | }
331 | 
332 | .details .concise ul{
333 |   margin: 0 !important;
334 |   -webkit-columns: 2;
335 |   -moz-columns: 2;
336 |   columns: 2;
337 | }
338 | 
339 | .details .concise li{
340 |   margin: 0 !important;
341 | }
342 | 
343 | .details .concise li{
344 |   margin-left: 0 !important;
345 | }
346 | 
347 | 
348 | 
349 | /* sidebar */
350 | 
351 | .aside h2{
352 |   font-weight: 400;
353 |   font-size: 1.1rem;
354 | }
355 | 
356 | .aside .level2{
357 |   margin-top: 0.5in;
358 | }
359 | 
360 | #contact ul{
361 |   margin-top: 0.05in;
362 |   padding-left: 0;
363 |   font-weight: 400;
364 |   line-height: 1.75;
365 | }
366 | 
367 | #contact li > i{
368 |   width: 0.9rem; /* for text alignment */
369 |   text-align: right;
370 | }
371 | 
372 | #skills{
373 |   line-height: 1.5;
374 | }
375 | 
376 | #skills ul{
377 |   margin: 0.05in 0 0.15in;
378 |   padding: 0;
379 | }
380 | 
381 | #disclaimer{
382 |   position: absolute;
383 |   bottom: 0;
384 |   right: var(--sidebar-horizontal-padding);
385 |   font-size: 0.75rem;
386 |   font-style: italic;
387 |   line-height: 1.1;
388 |   text-align: right;
389 |   color: #777;
390 | }
391 | 
392 | #disclaimer code{
393 |   color: #666;
394 |   font-family: "Source Code Pro";
395 |   font-weight: 400;
396 |   font-style: normal;
397 | }
398 | 
399 | /* Page breaks */
400 | 
401 | h2 {
402 |   break-after: avoid;
403 | }
404 | 
405 | .blocks {
406 |   break-inside: avoid;
407 | }
408 | 
409 | /* Paged.js viewer */
410 | 
411 | @media screen {
412 |   body {
413 |     background-color: var(--viewer-background-color);
414 |     margin: 0; /* for mobile */
415 |     width: calc(var(--pagedjs-width) + 2 * var(--viewer-pages-spacing)); /* for mobile */
416 |   }
417 |    .pagedjs_pages {
418 |     max-width: var(--pagedjs-width);
419 |     margin: 0 auto;
420 |     display: flex;
421 |     flex-direction: column;
422 |   }
423 |    .pagedjs_page {
424 |     box-shadow: 0 0 calc(0.66667 * var(--viewer-pages-spacing)) var(--viewer-shadow-color);
425 |     margin: var(--viewer-pages-spacing) 0;
426 |   }
427 | }
428 |  @media screen and (min-width: 8.5in) {
429 |   /* not a mobile */
430 |   body {
431 |     margin: auto;
432 |     width: unset;
433 |   }
434 | }
435 | 


--------------------------------------------------------------------------------