├── Eval.py ├── FAERSdata.py ├── Model.py ├── README.md ├── SignalScoresSource └── PRR05 │ └── prr05_14.csv ├── img └── pipeline.jpg ├── mapping.py ├── pickles ├── drugid2rxnorm_mapping.pkl ├── rxnorm2features_mapping.pkl └── sider_eval_pairs_final.pkl ├── run.py ├── similarity.py └── utils.py /Eval.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/Eval.py -------------------------------------------------------------------------------- /FAERSdata.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/FAERSdata.py -------------------------------------------------------------------------------- /Model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/Model.py -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/README.md -------------------------------------------------------------------------------- /SignalScoresSource/PRR05/prr05_14.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/SignalScoresSource/PRR05/prr05_14.csv -------------------------------------------------------------------------------- /img/pipeline.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/img/pipeline.jpg -------------------------------------------------------------------------------- /mapping.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/mapping.py -------------------------------------------------------------------------------- /pickles/drugid2rxnorm_mapping.pkl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/pickles/drugid2rxnorm_mapping.pkl -------------------------------------------------------------------------------- /pickles/rxnorm2features_mapping.pkl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/pickles/rxnorm2features_mapping.pkl -------------------------------------------------------------------------------- /pickles/sider_eval_pairs_final.pkl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/pickles/sider_eval_pairs_final.pkl -------------------------------------------------------------------------------- /run.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/run.py -------------------------------------------------------------------------------- /similarity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/similarity.py -------------------------------------------------------------------------------- /utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ruoqi-liu/LP-SDA/HEAD/utils.py --------------------------------------------------------------------------------