├── .gitignore ├── README.md ├── analysis ├── Experiment3-bptt │ ├── __pycache__ │ │ └── utils.cpython-38.pyc │ ├── cornn_class.py │ ├── experiment3a_results.npz │ ├── experiment3b_results.npz │ ├── rnn_class.py │ ├── run_tf_experiment3b.py │ ├── run_tf_experiment_3a.py │ ├── torch_bptt.py │ └── utils.py ├── Experiment6-correlated-noise │ ├── correlated_noise.py │ ├── rnn_class.py │ └── utils_admm.py ├── Experiment7-large-scale-training │ ├── rnn_class.py │ ├── run_experiment_largescale.py │ └── utils.py ├── Experiment8-poisson-noise │ ├── rnn_class.py │ ├── run_experiment_8.py │ └── utils.py ├── experiment1-random-with-init │ ├── experiment1a_results_fp.npz │ ├── experiment1b_results_fp.npz │ ├── experiment1c_results_fp.npz │ ├── figure_scripts │ │ └── plot_subfigure.py │ ├── optimize_variables.py │ ├── rnn_class.py │ ├── run_experiment_1a.py │ ├── run_experiment_1b.py │ ├── run_experiment_1c.py │ ├── try_timeout.py │ └── utils.py ├── experiment2-random-reg-exp │ ├── figure_scripts │ │ └── plot_subfigure.py │ ├── rnn_class.py │ ├── run_experiment2a.py │ ├── run_experiment2b.py │ └── utils.py ├── experiment4-line attractor │ ├── rnn_class.py │ ├── subsampling_experiment.npz │ ├── test_new_network.py │ ├── test_subsampling.py │ ├── test_timescales.py │ ├── timescales_experiment.npz │ ├── torch_bptt_line_demo.py │ └── utils_admm.py └── experiment5-kbit │ ├── RNN_lib.py │ ├── create_trial_data.py │ ├── optimize_variables.py │ ├── rnn_class.py │ ├── run_increasing_neuron_number.py │ ├── run_increasing_neuron_number_low_trial.py │ ├── run_increasing_trial_number.py │ ├── training_kbit_task │ └── RNN_lib.py │ ├── utils_admm.py │ └── utils_kbit.py └── figures ├── Figure 1 ├── Figure1.key └── Figure1.pdf ├── Figure 2 ├── Figure2.key ├── Figure2.pdf └── code │ └── loss_generation.py ├── Figure 3 ├── Figure3.ai ├── Figure3.pdf └── code │ ├── Figure3_python.pdf │ └── plot_figure3.py ├── Figure 4 ├── Figure4.ai ├── Figure4.pdf ├── code │ ├── create_the_network_data.py │ ├── plot_figure7.py │ ├── prepare_figure7.py │ ├── rnn_class.py │ └── utils_admm.py └── subfigures │ ├── Figure 7B1.pdf │ ├── Figure 7B2.pdf │ ├── Figure 7C1.pdf │ ├── Figure 7C2.pdf │ ├── Figure 7D.pdf │ ├── Figure 7E.pdf │ ├── Figure7A.pdf │ └── Figure7a.key ├── Figure 5 ├── Figure5.ai ├── Figure5.pdf ├── code │ ├── Figure 8A.pdf │ ├── Figure 8B.pdf │ ├── Figure 8C.pdf │ ├── Figure 8D.pdf │ └── plot_figure_8.py └── subfigs │ ├── Figure 8A.pdf │ ├── Figure 8B.pdf │ └── Figure 8D.pdf ├── Figure S1 ├── FigureS1.ai ├── FigureS1.pdf ├── code │ ├── Figure 3A.pdf │ ├── Figure 3B.pdf │ └── plot_figure_3.py └── subfigs │ ├── Figure 3A.pdf │ └── Figure 3B.pdf ├── Figure S10 ├── FigureS10.ai ├── FigureS10.pdf └── code │ ├── Figure S6A.pdf │ ├── Figure S6B.pdf │ ├── Figure S6C.pdf │ ├── Figure S6D.pdf │ ├── plot_figureS6.py │ └── test_timescales.py ├── Figure S11 ├── FigureS11-python.pdf ├── figureS11.ai ├── figureS11.pdf └── plot_figure_s11.py ├── Figure S2 ├── FigureS2.ai ├── FigureS2.pdf ├── code │ └── plot_figure4.py └── subfigures │ ├── Figure4a.pdf │ └── Figure4b.pdf ├── Figure S3 ├── FigureS3-python.pdf ├── FigureS3.ai ├── FigureS3.pdf └── plot_figures3.py ├── Figure S4 ├── FigureS4.ai ├── FigureS4.pdf ├── FigureS4a.pdf ├── FigureS4b.pdf └── code │ ├── FigureS1a.pdf │ ├── FigureS1b.pdf │ └── plot_figures1.py ├── Figure S5 ├── FigureS5.ai ├── FigureS5.pdf └── code │ └── plot_figureS2.py ├── Figure S6 ├── FigureS6.ai ├── FigureS6.pdf └── code │ ├── FigureS3c.pdf │ ├── plot_figure_S3ab.py │ └── plot_subfigure3c.py ├── Figure S7 ├── FigureS7.pdf └── code │ ├── Figure5.ipynb │ ├── Figure5a.pdf │ ├── Figure5b1.pdf │ ├── Figure5b2.pdf │ ├── Figure5c1.pdf │ ├── Figure5c1.png │ ├── Figure5c2.png │ ├── RNN_lib.py │ ├── __pycache__ │ ├── RNN_lib.cpython-310.pyc │ ├── RNN_lib.cpython-39.pyc │ ├── rnn_class.cpython-39.pyc │ ├── utils_admm.cpython-39.pyc │ └── utils_kbit.cpython-39.pyc │ ├── cornn_class.py │ ├── rnn_class.py │ ├── utils.py │ ├── utils_admm.py │ ├── utils_kbit.py │ └── 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