├── LICENSE.txt ├── README.md ├── classifier.py ├── config.py ├── consensus.py ├── deepnovo ├── LICENSE ├── README.md ├── deepnovo_config_template.py ├── deepnovo_cython_modules.pyx ├── deepnovo_cython_setup.py ├── deepnovo_main.py ├── deepnovo_main_modules.py ├── deepnovo_misc.py ├── deepnovo_model.py ├── deepnovo_model_decoding.py ├── deepnovo_model_training.py ├── deepnovo_utils.py ├── deepnovo_worker_db.py ├── deepnovo_worker_io.py └── deepnovo_worker_test.py ├── download_ids.tsv ├── input.py ├── interspec.py ├── main.py ├── masstol.py ├── singlealg.py ├── userargs.py └── utils.py /LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/LICENSE.txt -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/README.md -------------------------------------------------------------------------------- /classifier.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/classifier.py -------------------------------------------------------------------------------- /config.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/config.py -------------------------------------------------------------------------------- /consensus.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/consensus.py -------------------------------------------------------------------------------- /deepnovo/LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/LICENSE -------------------------------------------------------------------------------- /deepnovo/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/README.md -------------------------------------------------------------------------------- /deepnovo/deepnovo_config_template.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_config_template.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_cython_modules.pyx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_cython_modules.pyx -------------------------------------------------------------------------------- /deepnovo/deepnovo_cython_setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_cython_setup.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_main.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_main.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_main_modules.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_main_modules.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_misc.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_misc.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_model.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_model_decoding.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_model_decoding.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_model_training.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_model_training.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_utils.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_worker_db.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_worker_db.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_worker_io.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_worker_io.py -------------------------------------------------------------------------------- /deepnovo/deepnovo_worker_test.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/deepnovo/deepnovo_worker_test.py -------------------------------------------------------------------------------- /download_ids.tsv: -------------------------------------------------------------------------------- 1 | Download Filename Google Drive ID Size -------------------------------------------------------------------------------- /input.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/input.py -------------------------------------------------------------------------------- /interspec.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/interspec.py -------------------------------------------------------------------------------- /main.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/main.py -------------------------------------------------------------------------------- /masstol.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/masstol.py -------------------------------------------------------------------------------- /singlealg.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/singlealg.py -------------------------------------------------------------------------------- /userargs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/userargs.py -------------------------------------------------------------------------------- /utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/semiller10/postnovo/HEAD/utils.py --------------------------------------------------------------------------------