├── .gitmodules ├── External └── tclap │ ├── Arg.h │ ├── ArgException.h │ ├── COPYING │ ├── CmdLine.h │ ├── CmdLineInterface.h │ ├── CmdLineOutput.h │ ├── Constraint.h │ ├── DocBookOutput.h │ ├── HelpVisitor.h │ ├── IgnoreRestVisitor.h │ ├── MultiArg.h │ ├── MultiSwitchArg.h │ ├── OptionalUnlabeledTracker.h │ ├── StdOutput.h │ ├── SwitchArg.h │ ├── UnlabeledMultiArg.h │ ├── UnlabeledValueArg.h │ ├── ValueArg.h │ ├── ValuesConstraint.h │ ├── VersionVisitor.h │ ├── Visitor.h │ └── XorHandler.h ├── GammaAdjMatrices ├── AdjacencyMatrix10.txt ├── AdjacencyMatrix2.txt ├── AdjacencyMatrix3.txt ├── AdjacencyMatrix4.txt ├── AdjacencyMatrix5.txt ├── AdjacencyMatrix6.txt ├── AdjacencyMatrix7.txt ├── AdjacencyMatrix8.txt ├── AdjacencyMatrix9.txt ├── GammaMatrix10.txt ├── GammaMatrix2.txt ├── GammaMatrix3.txt ├── GammaMatrix4.txt ├── GammaMatrix5.txt ├── GammaMatrix6.txt ├── GammaMatrix7.txt ├── GammaMatrix8.txt └── GammaMatrix9.txt ├── README.txt ├── bin ├── citup.py ├── citup_iter.py ├── 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