├── README.md ├── atlases ├── AAL2_Atlas_Labels.mat ├── AAL2_Atlas_Map.nii ├── AnatomyToolbox_Atlas_Labels.mat ├── AnatomyToolbox_Atlas_Map.nii ├── Brodmann_Atlas_Labels.mat ├── Brodmann_Atlas_Map.nii ├── HarvardOxford-maxprob-thr0_Atlas_Labels.mat ├── HarvardOxford-maxprob-thr0_Atlas_Map.nii ├── RL_Atlas_Labels.mat ├── RL_Atlas_Map.nii ├── Talairach_Atlas_Labels.mat └── Talairach_Atlas_Map.nii ├── ccnl_behavioral_rdms.m ├── ccnl_bic.m ├── ccnl_check_mask.m ├── ccnl_check_multi.m ├── ccnl_check_registration.m ├── ccnl_check_rsa.m ├── ccnl_create_mask.m ├── ccnl_cva.m ├── ccnl_decode_regressor.m ├── ccnl_extract_clusters.m ├── ccnl_fmri_con.m ├── ccnl_fmri_con_ants.m ├── ccnl_fmri_glm.m ├── ccnl_fmri_glm_ants.m ├── ccnl_fmri_preproc.m ├── ccnl_fmri_preproc_ants.m ├── ccnl_get_activations.m ├── ccnl_get_beta.m ├── ccnl_get_beta_series.m ├── ccnl_get_design.m ├── ccnl_get_residuals.m ├── ccnl_get_tmap.m ├── ccnl_load_mask.m ├── ccnl_match_rdms.m ├── ccnl_mean.m ├── ccnl_plot_movement.m ├── ccnl_plot_regressors.m ├── ccnl_results_table.m ├── ccnl_roi_glm.m ├── ccnl_roi_rdms.m ├── ccnl_rsa.m ├── ccnl_rsa_searchlight.m ├── ccnl_rsa_view.m ├── ccnl_rsa_view_searchlight.m ├── ccnl_searchlight_rdms.m ├── ccnl_vbm.m ├── ccnl_vbm_preproc.m ├── ccnl_view.m ├── ccnl_view_mask.m ├── ccnl_vifs.m ├── get_beta_or_tmap_helper.m ├── get_mask_format_helper.m ├── random_string.m └── templates ├── TT_N27_SurfVol.nii ├── TT_N27_SurfVol_2x2x2.nii ├── T_template0.nii.gz ├── T_template0_BrainCerebellumProbabilityMask.nii.gz └── T_template0_BrainCerebellumRegistrationMask.nii.gz /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/sjgershm/ccnl-fmri/HEAD/README.md -------------------------------------------------------------------------------- /atlases/AAL2_Atlas_Labels.mat: -------------------------------------------------------------------------------- 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