├── .codeclimate.yml ├── .gitignore ├── .pre-commit-config.yaml ├── .pylintrc ├── .travis.yml ├── .vscode ├── launch.json └── settings.json ├── README.md ├── demo ├── demo_entropycalc.py ├── demo_generators.py ├── demo_leadlag_analysis.py └── demo_networkranking.py ├── docs ├── inputdataformat.rst ├── intro.rst ├── noderank.rst ├── outputs.rst ├── supportingsoftware.rst ├── transentropy.rst └── weightcalc.rst ├── example_configs ├── cases │ └── tennessee_eastman │ │ ├── graphreduce.json │ │ ├── noderank.json │ │ ├── plotting.json │ │ └── weightcalc.json ├── config_createarrays.json ├── config_full.json ├── config_graphreduce.json ├── config_noderank.json ├── config_plotting.json ├── config_trendextraction.json └── config_weightcalc.json ├── faultmap ├── __init__.py ├── config_setup.py ├── data_processing.py ├── datagen.py ├── graphreduce.py ├── infodynamics.py ├── networkgen.py ├── noderank.py ├── type_definitions.py ├── weightcalc.py ├── weightcalc_onesource.py └── weightcalculators.py ├── infodynamics.jar ├── matplotlibrc ├── plotting ├── __init__.py ├── figtypes.py └── plotter.py ├── pyproject.toml ├── run_createarrays.py ├── run_full.py ├── run_graphreduce.py ├── run_noderank.py ├── run_plotting.py ├── run_trendextraction.py ├── run_weightcalc.py ├── tests ├── __init__.py ├── test_all.py ├── test_autoreg_tecalc.py ├── test_config.json └── test_configs │ ├── config_createarrays.json │ ├── config_full.json │ ├── config_graphreduce.json │ ├── config_noderank.json │ ├── config_plotting.json │ ├── config_trendextraction.json │ ├── config_weightcalc.json │ └── test │ ├── fulldemo │ ├── graphreduce.json │ ├── noderank.json │ ├── plotting.json │ └── weightcalc.json │ ├── quickdemo │ ├── graphreduce.json │ ├── noderank.json │ ├── plotting.json │ ├── resultreconstruction.json │ └── weightcalc.json │ └── rankdemo │ └── noderank.json └── uv.lock /.codeclimate.yml: -------------------------------------------------------------------------------- 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